BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0565900 Os05g0565900|Os05g0565900
(430 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0565900 Similar to WRKY transcription factor 49 449 e-126
Os01g0665500 WRKY3 (WRKY14) (WRKY transcription factor 16) ... 130 2e-30
Os01g0626400 DNA-binding protein WRKY2-like (WRKY transcrip... 109 4e-24
Os07g0111400 WRKY transcription factor 29 108 8e-24
Os03g0758000 Similar to WRKY DNA binding protein 107 1e-23
Os11g0490900 Similar to WRKY transcription factor 72 93 3e-19
Os04g0545000 Similar to WRKY transcription factor 34 87 3e-17
Os05g0474800 WRKY transcription factor 70 86 6e-17
Os07g0583700 WRKY transcription factor 78 86 6e-17
Os09g0481700 SUSIBA2-like (WRKY transcription factor 80) 85 1e-16
Os01g0826400 WRKY transcription factor 24 (WRKY24) 85 1e-16
Os01g0182700 Similar to WRKY transcription factor 34 84 2e-16
Os01g0584900 WRKY transcription factor 28-like (WRKY5) (WRK... 83 4e-16
Os01g0734000 Similar to WRKY DNA binding protein 83 5e-16
Os08g0499300 WRKY transcription factor 30 82 6e-16
Os04g0471700 Similar to WRKY10 (WRKY transcription factor 35) 81 1e-15
Os05g0343400 WRKY transcription factor 53 (Transcription fa... 80 4e-15
AF193802 79 7e-15
Os07g0596900 Similar to SUSIBA2-like (WRKY transcription fa... 75 7e-14
Os03g0758900 Similar to WRKY 11 (Fragment) 75 1e-13
Os12g0507300 Similar to WRKY 10 (Fragment) 74 3e-13
Os05g0183100 WRKY transcription factor 67 73 3e-13
Os05g0137500 70 3e-12
Os01g0186000 Similar to WRKY transcription factor 10 70 4e-12
Os01g0714800 WRKY transcription factor 26 69 7e-12
>Os05g0565900 Similar to WRKY transcription factor 49
Length = 430
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 260/430 (60%), Positives = 260/430 (60%)
Query: 1 MSXXXXXXXXFPFHDELASLFAERPPNGAMPGMLQQQQPWSFIDYHHHLMQESAPTTPPL 60
MS FPFHDELASLFAERPPNGAMPGMLQQQQPWSFIDYHHHLMQESAPTTPPL
Sbjct: 1 MSGGGGGGEGFPFHDELASLFAERPPNGAMPGMLQQQQPWSFIDYHHHLMQESAPTTPPL 60
Query: 61 DYEAFAGEFDDDVAPLEEVKRELVVDGVGLFPXXXXXXXXXXXXXXXPMTPNXXXXXXXX 120
DYEAFAGEFDDDVAPLEEVKRELVVDGVGLFP PMTPN
Sbjct: 61 DYEAFAGEFDDDVAPLEEVKRELVVDGVGLFPGGGASAAAAAAAVAGPMTPNSMSVSSTS 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTTXXXXXXXXXXXXXXXXXXXX 180
SSTT
Sbjct: 121 SEACGVGGGAGGDEESAGKCKKEEEGDGGDDDGKEGSSTTKGDGDGEDKNKKGGKGKGKG 180
Query: 181 XXRPRQPRFAFMTKSEVDHLEDGYRWRKSYYRCTTQKCPVKKRVERSYQDAAVVITTYEG 240
RPRQPRFAFMTKSEVDHLEDGYRWRKSYYRCTTQKCPVKKRVERSYQDAAVVITTYEG
Sbjct: 181 EKRPRQPRFAFMTKSEVDHLEDGYRWRKSYYRCTTQKCPVKKRVERSYQDAAVVITTYEG 240
Query: 241 KHTHPIPXXXXXXXXXXXXXXXXXXXXXXQYHHPGHFAAAVGHRLPPQPHDALGGGXXXX 300
KHTHPIP QYHHPGHFAAAVGHRLPPQPHDALGGG
Sbjct: 241 KHTHPIPATLRGTAHLLGAAAAAHHHGGLQYHHPGHFAAAVGHRLPPQPHDALGGGLLAP 300
Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQQMPQPDHAGLVAIIXXXXXXXXXXXXXX 360
MQQMPQPDHAGLVAII
Sbjct: 301 PHAQHLHAMQHQMQLAAAAAASGGSLHAAAMQQMPQPDHAGLVAIIASTTGASTTPPPPP 360
Query: 361 XXXXXXXXXXXLRMQHFMAQDYGLLQDMFIPSPFLHNDDANNNNHPYSRAPAEGQITELA 420
LRMQHFMAQDYGLLQDMFIPSPFLHNDDANNNNHPYSRAPAEGQITELA
Sbjct: 361 ATGSAAAATTPLRMQHFMAQDYGLLQDMFIPSPFLHNDDANNNNHPYSRAPAEGQITELA 420
Query: 421 RHARPPVPSA 430
RHARPPVPSA
Sbjct: 421 RHARPPVPSA 430
>Os01g0665500 WRKY3 (WRKY14) (WRKY transcription factor 16) (WRKY16)
Length = 580
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/78 (80%), Positives = 63/78 (80%), Gaps = 13/78 (16%)
Query: 183 RPRQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQ 229
R RQPRFAFMTKSEVDHLEDGYRWRK SYYRCTTQKCPVKKRVERSYQ
Sbjct: 352 RARQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCPVKKRVERSYQ 411
Query: 230 DAAVVITTYEGKHTHPIP 247
D AVVITTYEGKHTHPIP
Sbjct: 412 DPAVVITTYEGKHTHPIP 429
>Os01g0626400 DNA-binding protein WRKY2-like (WRKY transcription factor 11)
(WRKY16)
Length = 379
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 57/78 (73%), Gaps = 13/78 (16%)
Query: 183 RPRQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQ 229
R RQPR AF+TKSEVDHLEDGYRWRK SYYRCTT KC VKKRVERSYQ
Sbjct: 187 RQRQPRVAFLTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTPKCGVKKRVERSYQ 246
Query: 230 DAAVVITTYEGKHTHPIP 247
D + VITTYEG+HTH P
Sbjct: 247 DPSTVITTYEGQHTHHSP 264
>Os07g0111400 WRKY transcription factor 29
Length = 290
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 55/75 (73%), Gaps = 13/75 (17%)
Query: 183 RPRQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQ 229
R RQPRFAFMTKSE+DHLEDGYRWRK SYYRCT KC VKKRVERS
Sbjct: 106 RARQPRFAFMTKSEIDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSD 165
Query: 230 DAAVVITTYEGKHTH 244
D +VVITTYEG+H+H
Sbjct: 166 DPSVVITTYEGQHSH 180
>Os03g0758000 Similar to WRKY DNA binding protein
Length = 314
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 54/75 (72%), Gaps = 13/75 (17%)
Query: 183 RPRQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQ 229
R RQPRFAFMTKSE+DHLEDGYRWRK SYYRCT KC VKKRVERS
Sbjct: 117 RARQPRFAFMTKSEIDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSD 176
Query: 230 DAAVVITTYEGKHTH 244
D +VVITTYEG+H H
Sbjct: 177 DPSVVITTYEGQHCH 191
>Os11g0490900 Similar to WRKY transcription factor 72
Length = 242
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 53/77 (68%), Gaps = 13/77 (16%)
Query: 183 RPRQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQ 229
+ R+PRFAF T+S+VD L+DGYRWRK SYYRCT Q C VKK+V+R +
Sbjct: 119 KERRPRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLSR 178
Query: 230 DAAVVITTYEGKHTHPI 246
D VV+TTYEG HTHPI
Sbjct: 179 DETVVVTTYEGTHTHPI 195
>Os04g0545000 Similar to WRKY transcription factor 34
Length = 250
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 49/73 (67%), Gaps = 13/73 (17%)
Query: 185 RQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQDA 231
R+PRF F T+S+VD L+DGY+WRK SYYRCT C VKKRVER +D
Sbjct: 154 REPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDC 213
Query: 232 AVVITTYEGKHTH 244
+VITTYEG+HTH
Sbjct: 214 RMVITTYEGRHTH 226
>Os05g0474800 WRKY transcription factor 70
Length = 572
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 13/76 (17%)
Query: 185 RQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQDA 231
R+PR T S++D L+DGYRWRK SYY+CTT CPV+K VER+ D
Sbjct: 376 REPRVVVQTMSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTTAGCPVRKHVERASNDL 435
Query: 232 AVVITTYEGKHTHPIP 247
VITTYEGKH H +P
Sbjct: 436 RAVITTYEGKHNHDVP 451
>Os07g0583700 WRKY transcription factor 78
Length = 618
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 46/76 (60%), Gaps = 13/76 (17%)
Query: 185 RQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQDA 231
R+PR T SEVD L+DGYRWRK SYY+CT CPV+K VER+ D
Sbjct: 394 REPRVVVQTVSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNTGCPVRKHVERASHDP 453
Query: 232 AVVITTYEGKHTHPIP 247
VITTYEGKH H +P
Sbjct: 454 KSVITTYEGKHNHEVP 469
>Os09g0481700 SUSIBA2-like (WRKY transcription factor 80)
Length = 633
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 46/76 (60%), Gaps = 13/76 (17%)
Query: 185 RQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQDA 231
R+PR T SEVD L+DGYRWRK SYY+CT Q C V+K VER+ D
Sbjct: 418 REPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHQGCSVRKHVERASHDL 477
Query: 232 AVVITTYEGKHTHPIP 247
VITTYEGKH H +P
Sbjct: 478 KSVITTYEGKHNHEVP 493
>Os01g0826400 WRKY transcription factor 24 (WRKY24)
Length = 555
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 13/76 (17%)
Query: 185 RQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQDA 231
R+PR T S++D L+DGYRWRK SYY+CTT CPV+K VER+ D
Sbjct: 369 REPRVVVQTMSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTTAGCPVRKHVERASHDL 428
Query: 232 AVVITTYEGKHTHPIP 247
VITTYEGKH H +P
Sbjct: 429 RAVITTYEGKHNHDVP 444
>Os01g0182700 Similar to WRKY transcription factor 34
Length = 424
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 48/75 (64%), Gaps = 13/75 (17%)
Query: 183 RPRQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQ 229
+ R+PRF F T S+VD L+DGY+WRK SYYRCT C VKKRVER +
Sbjct: 117 KVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAE 176
Query: 230 DAAVVITTYEGKHTH 244
D +VITTYEG+H H
Sbjct: 177 DPRMVITTYEGRHVH 191
>Os01g0584900 WRKY transcription factor 28-like (WRKY5) (WRKY transcription
factor 77)
Length = 246
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 13/73 (17%)
Query: 188 RFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQDAAVV 234
+ AF T+SEVD L+DGYRWRK +YYRC+++ C VKKRVER+ DA V
Sbjct: 124 KIAFKTRSEVDVLDDGYRWRKYGKKMVKNSPNPRNYYRCSSEGCRVKKRVERARDDARFV 183
Query: 235 ITTYEGKHTHPIP 247
+TTY+G H HP P
Sbjct: 184 VTTYDGVHNHPAP 196
>Os01g0734000 Similar to WRKY DNA binding protein
Length = 254
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 13/77 (16%)
Query: 183 RPRQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQ 229
+ +PRFAF T+S+ D L+DGYRWRK SYYRCT C VKK+V+R +
Sbjct: 158 KASRPRFAFQTRSDNDILDDGYRWRKYGQKAVKNSKHPRSYYRCTHHTCNVKKQVQRLAK 217
Query: 230 DAAVVITTYEGKHTHPI 246
D ++V+TTYEG H HP
Sbjct: 218 DTSIVVTTYEGVHNHPC 234
>Os08g0499300 WRKY transcription factor 30
Length = 674
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 45/76 (59%), Gaps = 13/76 (17%)
Query: 185 RQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQDA 231
R+PR T SEVD L+DGYRWRK SYY+CT C V+K VERS D
Sbjct: 472 REPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCSVRKHVERSSHDL 531
Query: 232 AVVITTYEGKHTHPIP 247
VITTYEGKH H +P
Sbjct: 532 KSVITTYEGKHNHEVP 547
>Os04g0471700 Similar to WRKY10 (WRKY transcription factor 35)
Length = 998
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 45/76 (59%), Gaps = 13/76 (17%)
Query: 185 RQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQDA 231
R+PR T SEVD L+DGYRWRK SYY+CT C V+K VER+ D
Sbjct: 739 REPRVVIQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCLVRKHVERASHDL 798
Query: 232 AVVITTYEGKHTHPIP 247
VITTYEGKH H +P
Sbjct: 799 KSVITTYEGKHNHEVP 814
>Os05g0343400 WRKY transcription factor 53 (Transcription factor WRKY12)
Length = 487
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 45/73 (61%), Gaps = 13/73 (17%)
Query: 185 RQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQDA 231
R+PR T S++D L+DG+RWRK SYY+CTT CPV+K VER+ D
Sbjct: 336 REPRLVVQTLSDIDILDDGFRWRKYGQKVVKGNPNPRSYYKCTTVGCPVRKHVERASHDT 395
Query: 232 AVVITTYEGKHTH 244
VITTYEGKH H
Sbjct: 396 RAVITTYEGKHNH 408
>AF193802
Length = 415
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 44/73 (60%), Gaps = 13/73 (17%)
Query: 188 RFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQDAAVV 234
R T SEVD +DGYRWRK SYY+CT Q C VKK +ERS QD V
Sbjct: 284 RIIVQTTSEVDLSDDGYRWRKYGQKVLKGNPHPRSYYKCTYQGCDVKKHIERSSQDPKGV 343
Query: 235 ITTYEGKHTHPIP 247
ITTYEGKH+H +P
Sbjct: 344 ITTYEGKHSHDVP 356
>Os07g0596900 Similar to SUSIBA2-like (WRKY transcription factor 80)
Length = 432
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 44/73 (60%), Gaps = 13/73 (17%)
Query: 188 RFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQDAAVV 234
+ T SE+D L+DGYRWRK SYY+CT C VKK+VERS ++ V
Sbjct: 326 KIIVSTTSEIDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTYLGCDVKKQVERSVEEPNAV 385
Query: 235 ITTYEGKHTHPIP 247
ITTYEGKH H +P
Sbjct: 386 ITTYEGKHIHDVP 398
>Os03g0758900 Similar to WRKY 11 (Fragment)
Length = 1002
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 13/76 (17%)
Query: 185 RQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQDA 231
R+P+ T+SEVD L+DGYRWRK SYY+CT C V+K++ER+ D
Sbjct: 887 RKPKIILQTRSEVDLLDDGYRWRKYGQKVVKGNPRPRSYYKCTADGCNVRKQIERASADP 946
Query: 232 AVVITTYEGKHTHPIP 247
V+TTY G+H H P
Sbjct: 947 KCVLTTYTGRHNHDPP 962
>Os12g0507300 Similar to WRKY 10 (Fragment)
Length = 511
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 42/75 (56%), Gaps = 13/75 (17%)
Query: 186 QPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQDAA 232
+ + T SEVD L+DGYRWRK SYY+CT C V+K +ER+ D
Sbjct: 377 EAKIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTYAGCNVRKHIERASSDPK 436
Query: 233 VVITTYEGKHTHPIP 247
VITTYEGKH H P
Sbjct: 437 AVITTYEGKHNHEPP 451
>Os05g0183100 WRKY transcription factor 67
Length = 194
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 13/70 (18%)
Query: 188 RFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQDAAVV 234
R F T+SEV+ L+DG++WRK +YYRC+T+ C VKKRVER +D V
Sbjct: 83 RIGFRTRSEVEILDDGFKWRKYGKKAVKNSPNPRNYYRCSTEGCNVKKRVERDREDHRYV 142
Query: 235 ITTYEGKHTH 244
ITTY+G H H
Sbjct: 143 ITTYDGVHNH 152
>Os05g0137500
Length = 502
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 14/77 (18%)
Query: 185 RQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCT-TQKCPVKKRVERSYQD 230
R+ R + +SE + DG +WRK +YYRCT +CPV+K+V+R +D
Sbjct: 233 RKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMASQCPVRKQVQRCAED 292
Query: 231 AAVVITTYEGKHTHPIP 247
+++ITTYEG H HP+P
Sbjct: 293 KSILITTYEGTHNHPLP 309
>Os01g0186000 Similar to WRKY transcription factor 10
Length = 219
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 13/73 (17%)
Query: 188 RFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQDAAVV 234
R F T+SEV+ L+DG++WRK +YYRC+ C VKKRVER D V
Sbjct: 94 RIGFRTRSEVEVLDDGFKWRKYGKKAVKSSPNPRNYYRCSAAGCGVKKRVERDGDDPRYV 153
Query: 235 ITTYEGKHTHPIP 247
+TTY+G H H P
Sbjct: 154 VTTYDGVHNHATP 166
>Os01g0714800 WRKY transcription factor 26
Length = 245
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 13/78 (16%)
Query: 183 RPRQPRFAFMTKSEVDHLEDGYRWRK-------------SYYRCTTQKCPVKKRVERSYQ 229
R + AF T+S+ + L+DGY+WRK +YYRC+T+ C VKKRVER
Sbjct: 142 RTTTDKIAFRTRSDDEILDDGYKWRKYGKKSVKNSPNPRNYYRCSTEGCNVKKRVERDKN 201
Query: 230 DAAVVITTYEGKHTHPIP 247
D V+T YEG H H P
Sbjct: 202 DPRYVVTMYEGIHNHVCP 219
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,959,171
Number of extensions: 365249
Number of successful extensions: 1028
Number of sequences better than 1.0e-10: 25
Number of HSP's gapped: 1004
Number of HSP's successfully gapped: 26
Length of query: 430
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 326
Effective length of database: 11,605,545
Effective search space: 3783407670
Effective search space used: 3783407670
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)