Os11g0490900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to WRKY transcription factor 72.
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Os11g0490900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to WRKY transcription factor 72.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 283.39 | 0.791 | 7.09 | 5.14 | 1.24 | -2.07 | -0.668 | 1.61 | 1.67 | 2.5 | 24.77 | 1385 | -- | -- |
| 286.16 | 0.788 | 7.1 | 4.79 | 1.27 | -1.89 | -0.589 | -- | 1.7 | 2.56 | 24.54 | 1376 | -- | -- |
| 284.82 | 0.786 | 7.08 | 5.16 | 1.27 | -2.12 | -- | 1.63 | 1.68 | 2.45 | 24.73 | 1350 | -- | -- |
| 285.35 | 0.787 | 7.14 | 4.7 | 1.47 | -2.35 | -- | -- | 1.63 | 1.35 | 23.83 | 1017 | -- | -- |
| 350.12 | 0.871 | 7.07 | 5.22 | -- | -2.22 | -- | 1.81 | 1.72 | -- | 24.6 | 1710 | -- | -- |
| 429.98 | 0.972 | 7.2 | 4.02 | 1.01 | -- | -0.973 | -- | 1.29 | 2.59 | -- | -- | -- | -- |
| 433.32 | 0.975 | 7.2 | 4.05 | 1.01 | -- | -- | -- | 1.3 | 2.52 | -- | -- | -- | -- |
| 351.23 | 0.873 | 7.13 | 4.75 | -- | -2.05 | -- | -- | 1.61 | -- | 24.48 | 1711 | -- | -- |
| 823.92 | 1.34 | 7.29 | -- | 1.24 | -1.13 | -- | -- | 0.886 | 1.87 | 25.64 | 999 | -- | -- |
| 493.06 | 1.04 | 7.19 | 4.09 | -- | -- | -- | -- | 1.33 | -- | -- | -- | -- | -- |
| 865.38 | 1.38 | 7.3 | -- | 1.09 | -- | -- | -- | 0.85 | 2.57 | -- | -- | -- | -- |
| 864.25 | 1.37 | 7.24 | -- | -- | -1.67 | -- | -- | 1.1 | -- | 21.69 | 25 | -- | -- |
| 934.68 | 1.43 | 7.29 | -- | -- | -- | -- | -- | 0.872 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 281.40 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 9 | 7 |
| 9 | 282.52 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 22 | 19 |
| 31 | 283.12 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 9 | 20 |
| 50 | 283.32 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 23 | NA |
| 137 | 284.17 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 143 | 284.24 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 144 | 284.25 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 146 | 284.26 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 206 | 284.81 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 274 | 287.12 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 308 | 288.77 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 16 | 14 |
| 310 | 288.94 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 434 | 293.11 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 474 | 293.67 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 16 | 13 |
| 479 | 293.70 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 481 | 293.76 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 16 | 7 |
| 485 | 293.77 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 16 | 5 |
| 488 | 293.81 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 496 | 293.85 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 519 | 294.11 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 564 | 294.72 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 16 | 14 |
| 565 | 294.84 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 581 | 295.07 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 591 | 295.24 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 592 | 295.24 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 598 | 295.31 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 603 | 295.38 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 668 | 295.73 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 7 |
| 671 | 295.74 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 676 | 295.76 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 725 | 296.17 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 728 | 296.18 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 739 | 296.26 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 742 | 296.29 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 764 | 296.52 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 780 | 296.55 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 875 | 297.04 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 943 | 297.68 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 6 |
| 972 | 297.95 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 4 |