Os01g0826400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WRKY transcription factor 24 (WRKY24).
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Os01g0826400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WRKY transcription factor 24 (WRKY24).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 275.91 | 0.78 | 10.1 | 1.82 | 0.771 | 1.12 | 0.868 | -1.88 | 0.707 | 3.02 | 69 | 9 | -- | -- |
| 283.4 | 0.79 | 10.1 | 1.71 | 0.758 | 1.11 | -0.502 | -- | 0.681 | 3.28 | 68.38 | 37 | -- | -- |
| 277.2 | 0.775 | 10.1 | 1.78 | 0.768 | 1.13 | -- | -1.35 | 0.689 | 3.16 | 68.89 | 8 | -- | -- |
| 283.82 | 0.785 | 10.1 | 1.73 | 0.76 | 1.12 | -- | -- | 0.687 | 3.2 | 68 | 9 | -- | -- |
| 290.21 | 0.793 | 10.1 | 1.74 | -- | 1.7 | -- | -1.36 | 0.717 | -- | 68 | 8 | -- | -- |
| 311.46 | 0.827 | 10.1 | 1.72 | 1.64 | -- | -0.136 | -- | 0.578 | 2.82 | -- | -- | -- | -- |
| 311.52 | 0.827 | 10.1 | 1.73 | 1.64 | -- | -- | -- | 0.579 | 2.82 | -- | -- | -- | -- |
| 297.16 | 0.803 | 10.1 | 1.74 | -- | 1.67 | -- | -- | 0.743 | -- | 68 | 9 | -- | -- |
| 362.29 | 0.886 | 10.1 | -- | 0.848 | 1.06 | -- | -- | 0.533 | 3.05 | 71.36 | 8 | -- | -- |
| 466.66 | 1.01 | 10.1 | 1.8 | -- | -- | -- | -- | 0.621 | -- | -- | -- | -- | -- |
| 390.1 | 0.924 | 10.1 | -- | 1.67 | -- | -- | -- | 0.387 | 2.83 | -- | -- | -- | -- |
| 376.92 | 0.904 | 10.1 | -- | -- | 1.69 | -- | -- | 0.552 | -- | 68.06 | 8 | -- | -- |
| 551.79 | 1.1 | 10.1 | -- | -- | -- | -- | -- | 0.422 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 274.74 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 2 | 274.93 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 9 | 23 |
| 3 | 275.33 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 6 | 276.08 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 7 | 276.19 | humidity | 70.0 | 10 | > th | dose dependent | no | NA | NA |
| 8 | 276.20 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 9 | 276.32 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 15 | 276.40 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 16 | 276.41 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 19 | 276.42 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 25 | 276.64 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 26 | 276.65 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 28 | 276.92 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 33 | 277.54 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 41 | 278.04 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 56 | 278.47 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 13 | 4 |
| 62 | 278.65 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 75 | 278.83 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 79 | 278.86 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 133 | 279.79 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 175 | 280.67 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 9 | 8 |
| 179 | 280.72 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 22 | 15 |
| 182 | 280.75 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 22 | 15 |
| 183 | 280.75 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 22 | 15 |
| 186 | 280.83 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 5 |
| 196 | 280.97 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 12 |
| 198 | 280.97 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 12 |
| 199 | 280.97 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 23 |
| 205 | 281.07 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 206 | 281.07 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 2 |
| 220 | 281.12 | humidity | 80.0 | 10 | > th | dose dependent | sin | 23 | NA |
| 223 | 281.17 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 12 |
| 226 | 281.21 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 12 |
| 229 | 281.29 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 8 |
| 238 | 281.30 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 13 |
| 241 | 281.33 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 22 | 15 |
| 257 | 281.48 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 272 | 281.53 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 9 |
| 286 | 281.61 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 9 |
| 288 | 281.61 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 9 |
| 312 | 281.80 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 11 |
| 317 | 281.83 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 9 |
| 351 | 282.00 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 18 |
| 376 | 282.18 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 382 | 282.19 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 388 | 282.21 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 14 |
| 434 | 282.41 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 24 | 14 |
| 450 | 282.53 | wind | 7.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 455 | 282.57 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 22 | NA |
| 461 | 282.60 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 7 | NA |
| 462 | 282.60 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 7 | NA |
| 463 | 282.60 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 7 | NA |
| 494 | 282.78 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 504 | 282.81 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 512 | 282.93 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 23 | 22 |
| 518 | 282.97 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 525 | 282.99 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 545 | 283.07 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 5 | 15 |
| 558 | 283.11 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 566 | 283.17 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 580 | 283.20 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 582 | 283.21 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 5 | 14 |
| 621 | 283.35 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 643 | 283.40 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 19 |
| 653 | 283.42 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 660 | 283.45 | radiation | 10.0 | 1440 | > th | dose independent | sin | 20 | NA |
| 680 | 283.51 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 21 |
| 688 | 283.54 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 745 | 283.68 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 7 | NA |
| 765 | 283.76 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 1 | 3 |
| 782 | 283.80 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 784 | 283.80 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 815 | 283.93 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 829 | 283.99 | radiation | 40.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 846 | 283.99 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 865 | 284.01 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 4 |
| 902 | 284.15 | wind | 7.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 909 | 284.17 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 911 | 284.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 957 | 284.30 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 23 |
| 993 | 284.47 | humidity | 90.0 | 10 | < th | dose dependent | no | NA | NA |