Os09g0481700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : SUSIBA2-like (WRKY transcription factor 80).
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Os09g0481700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : SUSIBA2-like (WRKY transcription factor 80).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.76 | 0.281 | 11.1 | -0.658 | 0.275 | 0.38 | -0.241 | 0.494 | -0.0866 | 3 | 70 | 1257 | -- | -- |
| 36.27 | 0.28 | 11.1 | -0.587 | 0.269 | 0.387 | -0.239 | -- | -0.0707 | 2.7 | 70 | 1210 | -- | -- |
| 35.82 | 0.279 | 11.1 | -0.661 | 0.285 | 0.392 | -- | 0.57 | -0.0898 | 2.33 | 70.88 | 1203 | -- | -- |
| 36.45 | 0.281 | 11.1 | -0.571 | 0.288 | 0.43 | -- | -- | -0.0647 | 2.34 | 70.01 | 1202 | -- | -- |
| 38.14 | 0.288 | 11.1 | -0.591 | -- | 0.466 | -- | 0.0846 | -0.0587 | -- | 71.74 | 1600 | -- | -- |
| 42.24 | 0.305 | 11.1 | -0.672 | 0.197 | -- | -0.544 | -- | -0.121 | 4.13 | -- | -- | -- | -- |
| 42.96 | 0.307 | 11.1 | -0.666 | 0.195 | -- | -- | -- | -0.118 | 3.27 | -- | -- | -- | -- |
| 37.44 | 0.285 | 11.1 | -0.598 | -- | 0.587 | -- | -- | -0.0649 | -- | 75.6 | 1632 | -- | -- |
| 44.77 | 0.312 | 11.1 | -- | 0.298 | 0.516 | -- | -- | 0.0114 | 2.21 | 70.51 | 1206 | -- | -- |
| 45.11 | 0.314 | 11.1 | -0.658 | -- | -- | -- | -- | -0.113 | -- | -- | -- | -- | -- |
| 54.66 | 0.346 | 11.1 | -- | 0.181 | -- | -- | -- | -0.0438 | 3.27 | -- | -- | -- | -- |
| 46.75 | 0.318 | 11.1 | -- | -- | 0.662 | -- | -- | 0.00737 | -- | 75.44 | 1599 | -- | -- |
| 56.52 | 0.351 | 11.1 | -- | -- | -- | -- | -- | -0.0399 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.78 | wind | 7.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 3 | 31.97 | wind | 7.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 4 | 32.09 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 11 | 32.62 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 33 | 33.23 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 14 |
| 35 | 33.25 | wind | 9.0 | 14400 | < th | dose independent | rect. | 3 | 12 |
| 36 | 33.26 | wind | 9.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 42 | 33.30 | wind | 7.0 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 68 | 33.42 | wind | 9.0 | 14400 | < th | dose independent | rect. | 21 | 18 |
| 102 | 33.63 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 121 | 33.71 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 125 | 33.73 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 149 | 33.82 | wind | 9.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 184 | 33.95 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 189 | 33.96 | wind | 9.0 | 14400 | > th | dose independent | rect. | 21 | 18 |
| 239 | 34.15 | wind | 7.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 241 | 34.16 | wind | 3.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 251 | 34.20 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 252 | 34.20 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 256 | 34.23 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 265 | 34.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 268 | 34.28 | wind | 3.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 305 | 34.46 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 309 | 34.48 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 403 | 34.72 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 466 | 34.83 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 11 |
| 509 | 34.92 | humidity | 70.0 | 720 | > th | dose independent | sin | 13 | NA |
| 557 | 34.98 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 581 | 35.02 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 593 | 35.04 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 17 | 13 |
| 602 | 35.05 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 603 | 35.05 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 612 | 35.06 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 9 |
| 614 | 35.07 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 622 | 35.07 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 647 | 35.11 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 657 | 35.12 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 683 | 35.15 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 717 | 35.20 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 759 | 35.25 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 12 |
| 760 | 35.25 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 12 |
| 763 | 35.25 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 784 | 35.27 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 799 | 35.28 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 806 | 35.29 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 18 |
| 813 | 35.30 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 832 | 35.32 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 833 | 35.32 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 835 | 35.32 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 7 |
| 860 | 35.33 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 875 | 35.35 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 895 | 35.36 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 920 | 35.38 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 943 | 35.41 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 8 |
| 976 | 35.43 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 986 | 35.44 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 993 | 35.45 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |