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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0758900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to WRKY 11 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.12 (0.0361) R2 : 0.162
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 4.02 (0.438) R2dE : 0.162 R2E : 0.159
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0855 (0.0762) R2dN8 : 0.00283 R2N8 : -5.39e-05
σ : 0.678
deviance : 212.07
__
_____
C
peak time of C : --
E
wheather : wind
threshold : 10.1
memory length : 75
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
213.49 0.687 3.08 -0.0234 0.165 1.53 -0.144 -9.44 0.106 12.9 10.11 230 -- --
220.09 0.691 3.09 -0.0724 0.177 2.21 -0.188 -- 0.0855 13 10.03 267 -- --
213.53 0.681 3.08 -0.0412 0.154 1.3 -- -10.7 0.105 12.8 10.15 245 -- --
216.07 0.685 3.11 0.039 0.18 3.38 -- -- 0.0975 13 10.1 258 -- --
215.08 0.683 3.07 -0.131 -- -0.0323 -- -16.5 0.0966 -- 10.19 245 -- --
246.87 0.737 3.12 -0.147 0.255 -- -0.641 -- 0.0335 14.6 -- -- -- --
248.28 0.738 3.12 -0.164 0.252 -- -- -- 0.0295 14.2 -- -- -- --
214.2 0.682 3.16 -0.159 -- 3.95 -- -- -0.0643 -- 10.17 103 -- --
214.89 0.683 3.11 -- 0.176 3.8 -- -- 0.0946 12.7 10.1 245 -- --
252.07 0.742 3.13 -0.174 -- -- -- -- 0.0234 -- -- -- -- --
248.98 0.738 3.12 -- 0.256 -- -- -- 0.0477 14.3 -- -- -- --
212.07 0.678 3.12 -- -- 4.02 -- -- 0.0855 -- 10.1 75 -- --
252.87 0.742 3.12 -- -- -- -- -- 0.0427 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 213.98 wind 7 30 > th dose dependent rect. 14 6
9 215.89 wind 9 90 > th dose dependent rect. 14 21
13 216.57 wind 9 30 > th dose independent rect. 15 5
20 217.01 wind 7 10 > th dose dependent rect. 14 20
21 217.02 wind 7 30 > th dose dependent sin 18 NA
24 217.14 wind 9 270 > th dose dependent rect. 15 1
26 217.19 wind 9 270 > th dose independent rect. 15 1
35 217.63 wind 7 10 > th dose dependent rect. 14 13
39 217.78 wind 9 90 > th dose dependent rect. 11 23
40 217.80 wind 9 90 > th dose dependent rect. 11 7
47 217.85 wind 9 90 > th dose dependent rect. 11 9
69 218.24 wind 7 10 > th dose dependent rect. 14 22
73 218.50 wind 9 30 > th dose independent rect. 15 3
75 218.52 wind 9 270 > th dose dependent rect. 22 19
84 218.65 wind 9 90 > th dose dependent rect. 11 15
85 218.65 wind 9 270 > th dose dependent rect. 1 16
97 218.72 wind 9 90 > th dose dependent rect. 22 22
98 218.73 wind 9 270 > th dose dependent rect. 9 8
106 218.75 wind 9 90 > th dose dependent rect. 11 12
267 219.46 wind 9 270 > th dose dependent no NA NA
268 219.46 wind 9 270 > th dose dependent rect. 9 17
403 219.63 wind 9 90 > th dose independent rect. 14 22
422 219.76 wind 9 270 > th dose independent rect. 11 6
425 219.79 wind 9 90 < th dose independent sin 20 NA
440 219.93 wind 7 10 > th dose dependent rect. 9 12
455 219.98 wind 7 10 > th dose dependent rect. 2 19
537 220.34 wind 9 90 > th dose independent rect. 11 9
542 220.38 wind 9 90 > th dose independent sin 20 NA
545 220.39 wind 9 270 > th dose independent rect. 22 19
557 220.49 wind 9 90 > th dose independent rect. 11 23
567 220.55 wind 9 270 > th dose independent rect. 1 16
593 220.66 wind 9 270 > th dose independent rect. 9 8
632 220.89 wind 9 90 > th dose independent rect. 11 15
675 221.03 wind 9 90 > th dose independent rect. 11 12
715 221.19 wind 9 90 > th dose independent rect. 14 12
736 221.29 wind 9 270 < th dose independent no NA NA
737 221.29 wind 7 10 > th dose dependent rect. 9 18
755 221.38 wind 9 90 > th dose independent rect. 14 9
800 221.46 wind 7 10 > th dose dependent no NA NA
844 221.54 wind 7 10 > th dose independent rect. 14 22
845 221.54 wind 7 10 > th dose dependent rect. 19 23
884 221.65 wind 7 10 > th dose independent rect. 9 12
912 221.70 wind 9 270 > th dose independent no NA NA
921 221.70 wind 9 270 > th dose independent rect. 9 17
979 221.76 wind 7 10 > th dose dependent rect. 11 23
991 221.77 wind 7 10 > th dose dependent rect. 17 23