Os05g0183100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WRKY transcription factor 67.
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Os05g0183100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WRKY transcription factor 67.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 162.18 | 0.598 | 10.7 | 0.614 | 0.763 | 0.835 | 0.13 | 0.689 | 0.278 | 19.1 | 21.3 | 380 | -- | -- |
| 163.81 | 0.596 | 10.7 | 0.439 | 0.765 | 0.807 | 0.428 | -- | 0.239 | 19 | 21.26 | 373 | -- | -- |
| 162.2 | 0.593 | 10.7 | 0.617 | 0.764 | 0.838 | -- | 0.699 | 0.277 | 19 | 21.29 | 386 | -- | -- |
| 164.27 | 0.597 | 10.7 | 0.43 | 0.766 | 0.808 | -- | -- | 0.239 | 19 | 21.25 | 378 | -- | -- |
| 189.67 | 0.641 | 10.7 | 0.56 | -- | 1.06 | -- | 0.911 | 0.219 | -- | 21.23 | 499 | -- | -- |
| 191.36 | 0.649 | 10.6 | 0.698 | 0.9 | -- | 0.404 | -- | 0.456 | 18.8 | -- | -- | -- | -- |
| 191.77 | 0.649 | 10.6 | 0.691 | 0.901 | -- | -- | -- | 0.457 | 18.8 | -- | -- | -- | -- |
| 192.59 | 0.646 | 10.7 | 0.34 | -- | 0.994 | -- | -- | 0.167 | -- | 21.38 | 489 | -- | -- |
| 168.26 | 0.604 | 10.7 | -- | 0.76 | 0.893 | -- | -- | 0.204 | 18.8 | 21.3 | 487 | -- | -- |
| 234.23 | 0.715 | 10.6 | 0.671 | -- | -- | -- | -- | 0.439 | -- | -- | -- | -- | -- |
| 204.37 | 0.669 | 10.7 | -- | 0.893 | -- | -- | -- | 0.38 | 18.8 | -- | -- | -- | -- |
| 195.17 | 0.651 | 10.7 | -- | -- | 1.08 | -- | -- | 0.112 | -- | 21.2 | 501 | -- | -- |
| 246.11 | 0.732 | 10.6 | -- | -- | -- | -- | -- | 0.365 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 152.42 | wind | 1 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 2 | 152.46 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 3 | 152.56 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 4 | 152.68 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 10 | 153.79 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 14 | 153.99 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 16 | 154.03 | wind | 1 | 14400 | < th | dose dependent | rect. | 16 | 15 |
| 19 | 154.09 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 36 | 154.80 | wind | 1 | 14400 | < th | dose dependent | sin | 10 | NA |
| 38 | 154.88 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 50 | 155.12 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 52 | 155.16 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 90 | 155.80 | humidity | 80 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 107 | 156.03 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 138 | 156.42 | wind | 1 | 14400 | < th | dose independent | sin | 10 | NA |
| 143 | 156.46 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 6 |
| 163 | 156.77 | wind | 1 | 14400 | > th | dose independent | sin | 10 | NA |
| 178 | 156.93 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 201 | 157.13 | wind | 3 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 247 | 157.46 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 265 | 157.55 | wind | 1 | 14400 | < th | dose dependent | rect. | 12 | 19 |
| 299 | 157.85 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 325 | 158.01 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 363 | 158.25 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 18 |
| 397 | 158.42 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 18 |
| 442 | 158.63 | humidity | 60 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 516 | 158.97 | wind | 1 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 540 | 159.07 | wind | 1 | 14400 | < th | dose independent | rect. | 12 | 19 |
| 549 | 159.12 | wind | 1 | 14400 | > th | dose independent | rect. | 12 | 19 |
| 561 | 159.17 | wind | 1 | 14400 | < th | dose independent | rect. | 12 | 21 |
| 615 | 159.34 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 20 |
| 657 | 159.50 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 678 | 159.57 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 684 | 159.59 | wind | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 724 | 159.76 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 18 |
| 732 | 159.79 | wind | 1 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 753 | 159.89 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 4 |
| 781 | 160.02 | wind | 1 | 14400 | < th | dose dependent | rect. | 3 | 11 |
| 815 | 160.19 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 10 |
| 841 | 160.31 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 859 | 160.41 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 873 | 160.48 | wind | 1 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 911 | 160.59 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 20 |
| 941 | 160.70 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 23 |