BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0278200 Os03g0278200|AK103544
(675 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0278200 NAD-dependent epimerase/dehydratase family pro... 1328 0.0
Os02g0678400 dTDP-4-dehydrorhamnose reductase family protein 499 e-141
Os05g0203400 dTDP-glucose 4,6-dehydratase family protein 152 1e-36
Os12g0181200 110 2e-24
Os04g0618200 UDP-glucose 4-epimerase family protein 102 1e-21
Os03g0278000 UDP-glucuronic acid decarboxylase 100 3e-21
Os08g0129700 UDP-glucose 4-epimerase family protein 100 6e-21
Os07g0139400 UDP-glucose 4-epimerase family protein 99 8e-21
Os01g0315800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35) 96 9e-20
Os07g0674100 UDP-glucuronic acid decarboxylase 94 4e-19
Os05g0363200 UDP-glucuronic acid decarboxylase 93 7e-19
Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2... 91 2e-18
Os03g0280800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35) 89 1e-17
Os01g0837300 UDP-glucuronic acid decarboxylase 86 7e-17
Os05g0595100 Similar to UDPglucose 4-epimerase-like protein 86 1e-16
Os02g0791500 Similar to Nucleotide sugar epimerase-like pro... 86 1e-16
Os03g0249500 Similar to Nucleotide sugar epimerase-like pro... 85 2e-16
Os09g0323000 Similar to UDP-galactose 4-epimerase-like protein 82 2e-15
Os08g0374800 Similar to UDP-galactose 4-epimerase-like protein 80 5e-15
AK109046 77 5e-14
Os06g0187200 Similar to Nucleotide sugar epimerase-like pro... 75 1e-13
Os06g0652400 Similar to GDP-4-keto-6-deoxy-D-mannose-3, 5-e... 73 6e-13
Os03g0405000 Reticulon family protein 71 2e-12
Os06g0652300 Similar to GDP-4-keto-6-deoxy-D-mannose-3, 5-e... 71 3e-12
>Os03g0278200 NAD-dependent epimerase/dehydratase family protein
Length = 675
Score = 1328 bits (3437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/675 (94%), Positives = 640/675 (94%)
Query: 1 MAAYEPKNILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCXXXXXXXXXXXXXXFK 60
MAAYEPKNILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYC FK
Sbjct: 1 MAAYEPKNILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCSSLSNLNPSRPSPNFK 60
Query: 61 FVKGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240
VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240
Query: 241 KGEVGHVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQKLKKL 300
KGEVGHVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQKLKKL
Sbjct: 241 KGEVGHVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQKLKKL 300
Query: 301 GWAERTLWEEGLKKTIEWYTNNPDYWGDVAGALLPHPRMLMTPGVERHNWTDEIKSLSTS 360
GWAERTLWEEGLKKTIEWYTNNPDYWGDVAGALLPHPRMLMTPGVERHNWTDEIKSLSTS
Sbjct: 301 GWAERTLWEEGLKKTIEWYTNNPDYWGDVAGALLPHPRMLMTPGVERHNWTDEIKSLSTS 360
Query: 361 PDEAKEXXXXXXXXXXXXXXXXXXXXXYKFLIYGRTGWIGGLLGKICEKQGIPYEYGKGR 420
PDEAKE YKFLIYGRTGWIGGLLGKICEKQGIPYEYGKGR
Sbjct: 361 PDEAKESSTAVPAATAKSTSSAPQKASYKFLIYGRTGWIGGLLGKICEKQGIPYEYGKGR 420
Query: 421 LEERSQLLQDIRNVKPTHVFNAAGVTGRPNVDWCETHKQDTIRTNVVGTLNLADVCREQG 480
LEERSQLLQDIRNVKPTHVFNAAGVTGRPNVDWCETHKQDTIRTNVVGTLNLADVCREQG
Sbjct: 421 LEERSQLLQDIRNVKPTHVFNAAGVTGRPNVDWCETHKQDTIRTNVVGTLNLADVCREQG 480
Query: 481 LLMINYATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSYYSKTKAMVEELLQEYDNVCTLR 540
LLMINYATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSYYSKTKAMVEELLQEYDNVCTLR
Sbjct: 481 LLMINYATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSYYSKTKAMVEELLQEYDNVCTLR 540
Query: 541 VRMPISSDLSNPRNFITKIARYDKVVNIPNSMTILDELLPISIEMAKRDCRGIWNFTNPG 600
VRMPISSDLSNPRNFITKIARYDKVVNIPNSMTILDELLPISIEMAKRDCRGIWNFTNPG
Sbjct: 541 VRMPISSDLSNPRNFITKIARYDKVVNIPNSMTILDELLPISIEMAKRDCRGIWNFTNPG 600
Query: 601 VVSHNEILEMYKKYLNPDFKWTNFTLEEQAKVIVAPRSNNEMDASKLKSEFPELLSIKDS 660
VVSHNEILEMYKKYLNPDFKWTNFTLEEQAKVIVAPRSNNEMDASKLKSEFPELLSIKDS
Sbjct: 601 VVSHNEILEMYKKYLNPDFKWTNFTLEEQAKVIVAPRSNNEMDASKLKSEFPELLSIKDS 660
Query: 661 LVKYVFEPNRKVPAN 675
LVKYVFEPNRKVPAN
Sbjct: 661 LVKYVFEPNRKVPAN 675
>Os02g0678400 dTDP-4-dehydrorhamnose reductase family protein
Length = 311
Score = 499 bits (1285), Expect = e-141, Method: Compositional matrix adjust.
Identities = 231/284 (81%), Positives = 257/284 (90%)
Query: 388 YKFLIYGRTGWIGGLLGKICEKQGIPYEYGKGRLEERSQLLQDIRNVKPTHVFNAAGVTG 447
YKFLIYGRTGWIGGLLG++C +GIP+ YG GRLE R+QL DI V PTHVFNAAGVTG
Sbjct: 24 YKFLIYGRTGWIGGLLGQLCAARGIPFAYGAGRLENRAQLETDIDEVAPTHVFNAAGVTG 83
Query: 448 RPNVDWCETHKQDTIRTNVVGTLNLADVCREQGLLMINYATGCIFEYDAKHPEGSGIGFK 507
RPNVDWCETH+ +TIR NV GTL LADVCR +GL++INYATGCIFEYDA H G+GIGFK
Sbjct: 84 RPNVDWCETHRTETIRANVCGTLTLADVCRARGLVLINYATGCIFEYDAGHQLGTGIGFK 143
Query: 508 EEDKPNFTGSYYSKTKAMVEELLQEYDNVCTLRVRMPISSDLSNPRNFITKIARYDKVVN 567
EED PNF GS+YSKTKAMVEELL+ Y+NVCTLRVRMPISSDLSNPRNFITKIARYDKVV+
Sbjct: 144 EEDTPNFVGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLSNPRNFITKIARYDKVVD 203
Query: 568 IPNSMTILDELLPISIEMAKRDCRGIWNFTNPGVVSHNEILEMYKKYLNPDFKWTNFTLE 627
IPNSMTILDELLPISIEMAKR+ GIWNFTNPGVVSHNEILEMY+ Y++P+F W NFTLE
Sbjct: 204 IPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRDYIDPNFSWKNFTLE 263
Query: 628 EQAKVIVAPRSNNEMDASKLKSEFPELLSIKDSLVKYVFEPNRK 671
EQAKVIVAPRSNNE+D +KLK+EFPELLSIKDSLV+YVF+PN+K
Sbjct: 264 EQAKVIVAPRSNNELDCTKLKAEFPELLSIKDSLVRYVFKPNQK 307
>Os05g0203400 dTDP-glucose 4,6-dehydratase family protein
Length = 200
Score = 152 bits (383), Expect = 1e-36, Method: Composition-based stats.
Identities = 73/115 (63%), Positives = 87/115 (75%), Gaps = 4/115 (3%)
Query: 6 PKNILITGAAGFIASHVANRLVRNYPHYKIVVLDKL-DYCXXXXXXXXXXXXXXFKFVKG 64
P+NILITGAAGFIASHVANRL+R++P Y++V LDKL DYC F FV+G
Sbjct: 23 PRNILITGAAGFIASHVANRLLRDHPSYRVVALDKLDDYCATLNNLAPAMASPNFAFVRG 82
Query: 65 DIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
D+ASADLV +LL E I+T+MHFAA THVD+ NSFEFTKNN+ GTHVLLE C+
Sbjct: 83 DVASADLVLHLLLAERINTVMHFAAHTHVDD---NSFEFTKNNVLGTHVLLEPCR 134
>Os12g0181200
Length = 1102
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 63/90 (70%), Gaps = 17/90 (18%)
Query: 176 SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235
++ L +ITT+GNNVYGPNQ EKLIP+ I L MRGLPLPIH AF
Sbjct: 875 TFHLAMITTQGNNVYGPNQLHEKLIPRLIPLTMRGLPLPIH-----------------AF 917
Query: 236 EVVLHKGEVGHVYNIGTVKERRVIDVAKDI 265
EVVLHKG+VGHVY+IGT KERRVID A DI
Sbjct: 918 EVVLHKGQVGHVYHIGTAKERRVIDEATDI 947
>Os04g0618200 UDP-glucose 4-epimerase family protein
Length = 428
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 151/353 (42%), Gaps = 43/353 (12%)
Query: 8 NILITGAAGFIASHVANRLVRNYPHYKIVVLDKL---DYCXXXXXXXXXXXXXXFKFVKG 64
++L+TG AG+I SH RL+R+ +Y++ ++D L + +F+
Sbjct: 88 HVLVTGGAGYIGSHATLRLLRD--NYRVTIVDNLSRGNMGAVRVLQRLFPEPGRLQFIYA 145
Query: 65 DIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
D+ A VN + + + D +MHFAA +V S + N T +LEA +
Sbjct: 146 DLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAY-NV 204
Query: 125 RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+ I+ ST YGE D + EA+ P NPY K AE +++ + + + V+
Sbjct: 205 KTLIYSSTCATYGEPDTMPIT---EATPQNPINPYGKAKKMAEDIILDFSKRSEMAVMIL 261
Query: 185 RGNNVYGPNQF--------PE----------------KLIPKFILLAMRGLPLPIHGDGS 220
R NV G + PE +IP L +RG P DG+
Sbjct: 262 RYFNVIGSDPGGRLGEAPRPELREHGRISGACFDAALGIIPG---LKVRGTDYPT-ADGT 317
Query: 221 NVRSYLYCEDVAEAFEVVLHKGEVGHV--YNIGTVKERRVIDVAKDICKLFGLDTEKVIR 278
+R Y+ D+ +A L K + G V YN+GT R V + + CK + KV
Sbjct: 318 CIRDYIDVTDLVDAHVKALDKAQPGKVGIYNVGTGHGRSVKEFV-EACKSATGASIKV-S 375
Query: 279 FVENRPFNDQRYFLDDQKLK-KLGWAERTL-WEEGLKKTIEWYTNNPDYWGDV 329
F+ RP + + D K+ +L W R + E L +W +P+ +G
Sbjct: 376 FLTRRPGDYAEVYSDPSKIHDELNWTARYIDLRESLSTAWKWQKAHPNGYGSA 428
>Os03g0278000 UDP-glucuronic acid decarboxylase
Length = 350
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 144/311 (46%), Gaps = 23/311 (7%)
Query: 9 ILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCXXXXXXXXXXXXXXFKFVKGDIAS 68
IL+TG AGFI SH+ ++L+ N H +++V D + F+ ++ D+
Sbjct: 37 ILVTGGAGFIGSHLVDKLMENEKH-EVIVADNF-FTGSKDNLKKWIGHPRFELIRHDVTQ 94
Query: 69 ADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
LV +D I H A N + K N+ GT +L K G R +
Sbjct: 95 PLLV-------EVDQIYHLACPASPIFYKHNPVKTIKTNVIGTLNMLGLAKRVGA--RIL 145
Query: 129 HVSTDEVYGETDE----DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
ST EVYG+ E +A GN + + + Y K AE L+ Y R +G+ +
Sbjct: 146 LTSTSEVYGDPLEHPQTEAYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 203
Query: 185 RGNNVYGP--NQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG 242
R N YGP N +++ FI A+RG PL + G+ RS+ Y D+ +++
Sbjct: 204 RIFNTYGPRMNIDDGRVVSNFIAQAVRGEPLTVQKPGTQTRSFCYVADMVNGLIKLMNGD 263
Query: 243 EVGHVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQKLKK-LG 301
G + N+G E ++++A+++ +L ++ E + EN P + ++ D K K+ LG
Sbjct: 264 NTGPI-NLGNPGEFTMLELAENVKEL--INPEVTVTMTENTPDDPRQRKPDITKAKEVLG 320
Query: 302 WAERTLWEEGL 312
W + + +GL
Sbjct: 321 WEPKIVLRDGL 331
>Os08g0129700 UDP-glucose 4-epimerase family protein
Length = 406
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 162/358 (45%), Gaps = 46/358 (12%)
Query: 4 YEP--KNILITGAAGFIASHVANRLVRNYPHYKIVVLDKL---DYCXXXXXXXXXXXXXX 58
+EP ++L+TG AG+I SH + RL+++ +Y++ ++D L +
Sbjct: 59 HEPGVTHVLVTGGAGYIGSHASLRLLKD--NYRVTIVDNLSRGNMGAVKVLQELFPQPGR 116
Query: 59 FKFVKGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 118
+F+ D+ VN + + D +MHFAA +V S + N T ++LEA
Sbjct: 117 LQFIYADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAM 176
Query: 119 KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAY--GRS 176
G ++ I+ ST YGE ++ +V E ++ LP NPY K AE +++ + GR
Sbjct: 177 ASHG-VKTLIYSSTCATYGEPEKMPIV---ETTRQLPINPYGKAKKMAEDIILDFTKGRK 232
Query: 177 YGLPVITTRGNNVYGPNQFPEKLI---PKFIL--------------------LAMRGLPL 213
+ V+ R NV G + PE + P+ L L ++G
Sbjct: 233 -DMAVMILRYFNVIGSD--PEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVKGTDY 289
Query: 214 PIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVGHV--YNIGTVKERRVIDVAKDICKLFGL 271
P DG+ +R Y+ D+ +A L+K E V YN+GT + R V + K G+
Sbjct: 290 PTT-DGTCIRDYIDVTDLVDAHVKALNKAEPSKVGIYNVGTGRGRSVKEFVDACKKATGV 348
Query: 272 DTEKVIRFVENRPFNDQRYFLDDQKLK-KLGW-AERTLWEEGLKKTIEWYTNNPDYWG 327
+ + I ++ RP + + D K+ +L W A+ T +E L W ++P +G
Sbjct: 349 NIK--IEYLSRRPGDYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSHPRGYG 404
>Os07g0139400 UDP-glucose 4-epimerase family protein
Length = 421
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 160/364 (43%), Gaps = 43/364 (11%)
Query: 4 YEP--KNILITGAAGFIASHVANRLVRNYPHYKIVVLDKL---DYCXXXXXXXXXXXXXX 58
+EP ++L+TG AG+I SH A RL+++ +++ ++D L +
Sbjct: 68 HEPGVTHVLVTGGAGYIGSHAALRLLKD--SFRVTIVDNLSRGNMGAIKVLQNLFSEPGR 125
Query: 59 FKFVKGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 118
+F+ D+ VN + + D +MHFAA +V S + N T V+LEA
Sbjct: 126 LQFIYADLGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAM 185
Query: 119 KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS-- 176
+R I+ ST YGE ++ + E + P NPY K AE +++ + +S
Sbjct: 186 -AAHNVRTLIYSSTCATYGEPEKMPIT---EGTPQFPINPYGKAKKMAEDIILDFSKSKK 241
Query: 177 YGLPVITTRGNNVYGPNQFPEKLI---PKFIL------------LAMRGLP-LPIHG--- 217
+ V+ R NV G + PE + PK L A+ +P L + G
Sbjct: 242 ADMAVMILRYFNVIGSD--PEGRLGEAPKPELREHGRISGACFDAALGIIPGLKVKGTDY 299
Query: 218 ---DGSNVRSYLYCEDVAEAFEVVLHKGEVGHV--YNIGTVKERRVIDVAKDICKLFGLD 272
DG+ VR Y+ D+ +A L+K E G V YN+GT K R V + + K G+D
Sbjct: 300 ETPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGKGRSVKEFVEACKKATGVD 359
Query: 273 TEKVIRFVENRPFNDQRYFLDDQKL-KKLGW-AERTLWEEGLKKTIEWYTNNPDYWGDVA 330
+ + + RP + + D K+ +L W A+ T E L+ W + +G
Sbjct: 360 IK--VDYFPRRPGDYAEVYSDPAKINSELNWTAQHTDLLESLRVAWTWQKKHRSGYGPPQ 417
Query: 331 GALL 334
+L
Sbjct: 418 AMVL 421
>Os01g0315800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35)
Length = 425
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 136/313 (43%), Gaps = 28/313 (8%)
Query: 9 ILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCXXXXXXXXXXXXXXFKFVKGDIAS 68
+L+TG AGF+ SH+ +RLV ++V+D + F+ ++ D+
Sbjct: 115 VLVTGGAGFVGSHLVDRLVER--GDSVIVVDNF-FTGRKDNVAHHLANPRFEVIRHDVVE 171
Query: 69 ADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
L+ +D I H A + N + K N+ GT +L K G +F+
Sbjct: 172 PILLE-------VDQIYHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIGA--KFL 222
Query: 129 HVSTDEVYGETDEDAVVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYGLPVI 182
ST EVYG+ + V + + NP Y K AE L M Y R L V
Sbjct: 223 LTSTSEVYGDPLQHPQVETYWGN----VNPIGVRSCYDEGKRTAETLTMDYHRGANLEVR 278
Query: 183 TTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240
R N YGP + +++ F+ A+R PL ++GDG RS+ Y D+ E + L
Sbjct: 279 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGL-MSLM 337
Query: 241 KGEVGHVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQKLKK- 299
+GE +N+G E ++++AK + +D I F N + + D + K+
Sbjct: 338 EGEHIGPFNLGNPGEFTMLELAKVVQDT--IDPNARIEFRPNTADDPHKRKPDITRAKEL 395
Query: 300 LGWAERTLWEEGL 312
LGW + EGL
Sbjct: 396 LGWEPKVPLREGL 408
>Os07g0674100 UDP-glucuronic acid decarboxylase
Length = 445
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 140/322 (43%), Gaps = 28/322 (8%)
Query: 9 ILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCXXXXXXXXXXXXXXFKFVKGDIAS 68
+++TG AGF+ SH+ +RL+ ++V+D L + F+ ++ D+
Sbjct: 128 VVVTGGAGFVGSHLVDRLLARGD--SVMVVDNL-FTGRKENVLHHAGNPNFEMIRHDVVE 184
Query: 69 ADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
L+ +D I H A + N + K N+ GT +L K G RF+
Sbjct: 185 PILL-------EVDQIYHLACPASPVHYKHNPVKTIKTNVVGTLNMLGLAKRVGA--RFL 235
Query: 129 HVSTDEVYGETDEDAVVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYGLPVI 182
ST EVYG+ + V + + NP Y K AE L M Y R L V
Sbjct: 236 LTSTSEVYGDPLQHPQVETYWGN----VNPIGVRSCYDEGKRTAETLTMDYHRGANLEVR 291
Query: 183 TTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240
R N YGP + +++ F+ A+R PL ++GDG RS+ Y D+ E ++
Sbjct: 292 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLME 351
Query: 241 KGEVGHVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQKLKK- 299
VG +N+G E ++++AK + +D I F N + + D + K+
Sbjct: 352 GEHVG-PFNLGNPGEFTMLELAKVVQDT--IDPNARIEFRPNTADDPHKRKPDISRAKEL 408
Query: 300 LGWAERTLWEEGLKKTIEWYTN 321
LGW + +GL ++ + +
Sbjct: 409 LGWEPKIPLHKGLPLMVQDFRD 430
>Os05g0363200 UDP-glucuronic acid decarboxylase
Length = 447
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 135/313 (43%), Gaps = 28/313 (8%)
Query: 9 ILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCXXXXXXXXXXXXXXFKFVKGDIAS 68
+L+TG AGF+ SH+ +RLV ++V+D L + F+ ++ D+
Sbjct: 127 VLVTGGAGFVGSHLVDRLVER--GDSVIVVDNL-FTGRKENVVHHFGNPNFEMIRHDVVE 183
Query: 69 ADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
L+ +D I H A + N + K N+ GT +L K RF+
Sbjct: 184 PILL-------EVDQIYHLACPASPVHYKYNPVKTIKTNVVGTLNMLGLAKRINA--RFL 234
Query: 129 HVSTDEVYGETDEDAVVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYGLPVI 182
ST EVYG+ + V + + NP Y K AE L M Y R L V
Sbjct: 235 LTSTSEVYGDPLQHPQVETYWGN----VNPIGVRSCYDEGKRTAETLTMDYHRGANLEVR 290
Query: 183 TTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240
R N YGP + +++ F+ A+R PL ++GDG RS+ Y D+ E ++
Sbjct: 291 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLME 350
Query: 241 KGEVGHVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQKLKK- 299
VG +N+G E ++++AK + +D I F N + + D + K+
Sbjct: 351 GEHVGP-FNLGNPGEFTMLELAKVVQDT--IDPNAKIEFRPNTQDDPHKRKPDIGRAKEL 407
Query: 300 LGWAERTLWEEGL 312
LGW + +GL
Sbjct: 408 LGWEPKIPLHKGL 420
>Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)
(UDP-galactose 4-epimerase)
Length = 373
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 151/348 (43%), Gaps = 43/348 (12%)
Query: 8 NILITGAAGFIASHVANRLVRNYPHYKIVVLDKL-----DYCXXXXXXXXXXXXXXFKFV 62
++L+TG AG+I +H RL+ + + V+D + F+
Sbjct: 27 SVLVTGGAGYIGTHTVLRLLEK--GFAVTVVDNFHNSVPEALDRVRLIAGAALSARLDFI 84
Query: 63 KGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
GD+ S D + + + D ++HFA V S + + +NN+ GT L A G
Sbjct: 85 AGDLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAMTKYG 144
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK------------AGAEMLV 170
++ + S+ VYG+ ++ V E S+L NPY TK A EM V
Sbjct: 145 -CKKIVFSSSATVYGQPEKTPCV---EDSKLSALNPYGTTKLVLENYFRQVQAADPEMRV 200
Query: 171 MAYGRSYGLPVITTRGNNV-YGPNQFPEKLIPKFILLAMRGLP-LPIHG------DGSNV 222
+ Y P+ R ++ P P L+P +A+ P L ++G DG+ +
Sbjct: 201 ILL--RYFNPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRRPELNVYGVDYPTRDGTAI 258
Query: 223 RSYLYCEDVAE----AFEVVLHKGEVGHV-YNIGTVKERRVIDVAKDICKLFGLDTEKV- 276
R Y++ D+A+ A E + ++G V YN+GT V++V K + G +K+
Sbjct: 259 RDYIHVVDLADGHIAALEKLFATPDIGCVAYNLGTGCGTTVLEVVKAFEEASG---KKIP 315
Query: 277 IRFVENRPFN-DQRYFLDDQKLKKLGWAERTLWEEGLKKTIEWYTNNP 323
I+ RP + + Y D+ K+LGW+ R E+ + W NP
Sbjct: 316 IKICPRRPGDCTEVYASTDKAKKELGWSARFGIEDMCRDQWNWAKKNP 363
>Os03g0280800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35)
Length = 396
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 136/323 (42%), Gaps = 28/323 (8%)
Query: 6 PKNILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCXXXXXXXXXXXXXXFKFVKGD 65
P +++TG AGF+ SH+ + L+ ++V+D + F+ ++ D
Sbjct: 84 PLRVVVTGGAGFVGSHLVDELLARGD--SVIVVDNF-FTGRKENVARHLADPRFELIRHD 140
Query: 66 IASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
+ L+ +D I H A + N + K N+ GT +L K G
Sbjct: 141 VVEPILLE-------VDQIYHLACPASPVHYKFNPIKTIKTNVMGTLNMLGLAKRVGA-- 191
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYGL 179
RF+ ST EVYG+ E + S NP Y K AE L M Y R G+
Sbjct: 192 RFLLTSTSEVYGDPLEHP----QKESYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGAGV 247
Query: 180 PVITTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEV 237
V R N YGP + +++ F+ +R P+ ++GDG RS+ Y D+ +
Sbjct: 248 EVRIARIFNTYGPRMCLDDGRVVSNFVAQTLRKQPMTVYGDGKQTRSFQYVSDLVDGLIT 307
Query: 238 VLHKGEVGHVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQKL 297
++ +G +N+G E ++++A+ + + +D + F N + D K
Sbjct: 308 LMESEHIG-PFNLGNPGEFTMLELAQVVKET--IDPSARVEFKPNTADDPHMRKPDISKA 364
Query: 298 KK-LGWAERTLWEEGLKKTIEWY 319
K L W + ++GL + + +
Sbjct: 365 KSLLHWEPKISLKQGLPRMVSDF 387
>Os01g0837300 UDP-glucuronic acid decarboxylase
Length = 410
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 133/317 (41%), Gaps = 28/317 (8%)
Query: 10 LITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCXXXXXXXXXXXXXXFKFVKGDIASA 69
++TG AGF+ SH+ +RL+ ++V+D + F+ ++ D+
Sbjct: 104 VVTGGAGFVGSHLVDRLLEQGD--SVIVVDNF-FTGRKDNVAHHLRNPRFELLRHDVVEP 160
Query: 70 DLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIH 129
L+ +D I H A + N + K N+ GT +L K G RF+
Sbjct: 161 ILLE-------VDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGA--RFLL 211
Query: 130 VSTDEVYGETDEDAVVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYGLPVIT 183
ST EVYG+ E + + NP Y K AE L M Y R G+ V
Sbjct: 212 TSTSEVYGDPLEHP----QKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRI 267
Query: 184 TRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 241
R N YGP + +++ F+ A+R P+ ++GDG RS+ Y D+ ++
Sbjct: 268 ARIFNTYGPRMCLDDGRVVSNFVAQALRRQPMTVYGDGKQTRSFQYVSDLVAGLMALMEG 327
Query: 242 GEVGHVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQKLKK-L 300
+G +N+G E ++++A+ + + +D I F N + D K K L
Sbjct: 328 DHIG-PFNLGNPGEFTMLELAQVVKET--IDPMATIEFKPNTADDPHMRKPDITKAKHLL 384
Query: 301 GWAERTLWEEGLKKTIE 317
W + EGL ++
Sbjct: 385 RWEPKVSLREGLPLMVK 401
>Os05g0595100 Similar to UDPglucose 4-epimerase-like protein
Length = 354
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 142/350 (40%), Gaps = 37/350 (10%)
Query: 7 KNILITGAAGFIASHVANRLVRNYPHYKIVVLDKLD----YCXXXXXXXXXXXXXXFKFV 62
+ IL+TG AG+I SH +L++ +++VVLD LD F
Sbjct: 7 RTILVTGGAGYIGSHTVLQLLQ--LGFRVVVLDNLDNASELAILRVRELAGHNANNLDFR 64
Query: 63 KGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
K D+ ++ + +++ + ++HFA V S + NN+ GT LL+ G
Sbjct: 65 KVDLRDKQALDQIFSSQRFEAVIHFAGLKAVGESVQKPLLYYDNNLIGTITLLQVMAAHG 124
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAE-MLVMAYGRSYGLPV 181
+ + S+ VYG E V E S L NPY TK E M + +
Sbjct: 125 -CTKLVFSSSATVYGWPKE---VPCTEESPLCAMNPYGRTKLVIEDMCRDLHASDPNWKI 180
Query: 182 ITTRGNNVYG----------PNQFPEKLIPKFILLAMRGLP-LPIHG------DGSNVRS 224
I R N G P P L+P +A+ P L ++G DG+ VR
Sbjct: 181 ILLRYFNPVGAHPSGYIGEDPCGIPNNLMPFVQQVAVGRRPALTVYGTDYNTKDGTGVRD 240
Query: 225 YLYCEDVAEAFEVVLHK-----GEVG-HVYNIGTVKERRVIDVAKDICKLFGLDTEKVIR 278
Y++ D+A+ L K +G VYN+GT K V+++ K G V
Sbjct: 241 YIHVVDLADGHIAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV-- 298
Query: 279 FVENRPFNDQRYFLDDQKL-KKLGWAERTLWEEGLKKTIEWYTNNPDYWG 327
F RP + + + K K+L W + EE + W + NP +G
Sbjct: 299 FAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEMCRDLWNWASKNPYGYG 348
>Os02g0791500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 437
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 144/353 (40%), Gaps = 32/353 (9%)
Query: 2 AAYEPKNILITGAAGFIASHVANRLVRNYPHYKIVVLDKLD--YCXXXXXXXXXXXXXXF 59
AA ++L+TGAAGF+ +H + L + +V +D + Y
Sbjct: 92 AAGAGMSVLVTGAAGFVGTHCSLALRKRGD--GVVGIDNFNSYYDPSLKKARRSLLASHG 149
Query: 60 KFV-KGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 118
FV +GDI L+ L ++H AAQ V + N + +NI G LLEAC
Sbjct: 150 VFVIEGDINDGRLLAKLFDVVPFTHVLHLAAQAGVRYAMENPASYVHSNIAGLVTLLEAC 209
Query: 119 KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 178
K + S+ VYG D+ + Q P + Y+ATK E + Y YG
Sbjct: 210 KDADPQPAIVWASSSSVYGLNDKVPFTESDRTDQ--PASLYAATKKAGEEITHTYNHIYG 267
Query: 179 LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV---RSYLYCEDVAEAF 235
L + R VYGP P+ F ++G P+ ++ + V R + Y +D+ +
Sbjct: 268 LSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDIVKGC 327
Query: 236 EVVL-----HKGEVG--------HVYNIGTVKERRVIDVAKDICKLFGLDTEK-VIRFVE 281
L G G ++N+G V ++ + K + +K V+
Sbjct: 328 LGSLDTAGKSTGTGGKKRGPAPYRIFNLGNTSPVTVPNLVSILEKHLRVKAKKNVVEMPG 387
Query: 282 NR--PFNDQRYFLDDQKLKKLGWAERTLWEEGLKKTIEWYTNNPDYWGDVAGA 332
N PF L Q +LG+ T + GLKK ++WY + Y+G G+
Sbjct: 388 NGDVPFTHANISLARQ---QLGYKPTTNLDVGLKKFVKWYLS---YYGYTRGS 434
>Os03g0249500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 484
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 138/338 (40%), Gaps = 33/338 (9%)
Query: 8 NILITGAAGFIASHVANRLVRNYPHYKIVVLDKL-DYC--XXXXXXXXXXXXXXFKFVKG 64
+L+TGAAGF+ H A L R ++ LD DY V G
Sbjct: 120 TVLVTGAAGFVGCHAAAALRRRGD--GVLGLDNFNDYYDPALKRGRAALLARSGVYVVDG 177
Query: 65 DIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
DIA A+L+ L ++H AAQ V ++ + + + N+ G LLEA ++
Sbjct: 178 DIADAELLAKLFDVVPFTHVLHLAAQAGVRHALVDPMSYVRANVGGFVALLEAARMANPQ 237
Query: 125 RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+ S+ VYG + H+ + P + Y+ATK E + AY YGL +
Sbjct: 238 PAIVWASSSSVYG-LNSHVPFSEHDRTD-RPASLYAATKKAGEEIAHAYNHIYGLSLTAL 295
Query: 185 RGNNVYGPNQFPEKLIPKFILLAMRGLPLPIH---GDGSN----VRSYLYCEDVAEAFEV 237
R VYGP P+ F + G P+ ++ G G++ R + Y +D+ +
Sbjct: 296 RFFTVYGPWGRPDMAYFFFTRDILAGRPITVYESAGGGTHQTTISRDFTYIDDIVKGCVG 355
Query: 238 VL-----HKGEVG--------HVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRP 284
L G G YN+G V + + KL + K +R + P
Sbjct: 356 ALDTAGRSTGSGGKKRGPAPFRTYNLGNTSPVPVTQLVDLLEKLLKV---KAVRKIVKMP 412
Query: 285 FN-DQRYFLDDQKL--KKLGWAERTLWEEGLKKTIEWY 319
N D Y + L ++LG+ T + G+KK + WY
Sbjct: 413 RNGDVPYTHANISLAQRELGYRPSTDLQTGVKKFVRWY 450
>Os09g0323000 Similar to UDP-galactose 4-epimerase-like protein
Length = 369
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 134/344 (38%), Gaps = 35/344 (10%)
Query: 7 KNILITGAAGFIASHVANRLVRNYPHYKIVVLDKL----DYCXXXXXXXXXXXXXXFKFV 62
+ +L+TG AG+I SH +L+ +++VV D L +
Sbjct: 18 RTVLVTGGAGYIGSHTVLQLLA--AGFRVVVADSLGNSSELAVRRVAALAGDKARNLSLH 75
Query: 63 KGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
K DI + + ++ D ++HFA V S + +N+ GT +LLE G
Sbjct: 76 KVDIRDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHG 135
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM-AYGRSYGLPV 181
++ + S+ VYG E L P NPY TK AE + Y +
Sbjct: 136 -CKKLVFSSSAAVYGSPKNSPCT---EEFPLTPHNPYGRTKLIAEEICRDIYHSDSEWSI 191
Query: 182 ITTRGNNVYG----------PNQFPEKLIPKFILLAMRGLP-LPIHG------DGSNVRS 224
I R N G P P L+P +A+ P L I G DG+ VR
Sbjct: 192 ILLRYFNPVGAHPSGYLGEDPCGIPNNLMPFVQQVAVGRRPSLTIFGNDYATKDGTGVRD 251
Query: 225 YLYCEDVAEAFEVVLHK---GEVG-HVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFV 280
Y++ D+AE L K +G YN+GT K V+++ K+ G VI
Sbjct: 252 YIHVVDLAEGHIAALRKLFESSIGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIG-- 309
Query: 281 ENRPFNDQRYFLDDQKL-KKLGWAERTLWEEGLKKTIEWYTNNP 323
RP + + F K ++ W + EE + W + NP
Sbjct: 310 PRRPGDAEILFSSAAKAEREFKWKAKYGIEEMCRDQWNWASKNP 353
>Os08g0374800 Similar to UDP-galactose 4-epimerase-like protein
Length = 408
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 137/351 (39%), Gaps = 36/351 (10%)
Query: 7 KNILITGAAGFIASHVANRLVRNYPHYKIVVLDKL----DYCXXXXXXXXXXXXXXFKFV 62
+ +L+TG AG+I SH +L+ ++ VV+D L + F
Sbjct: 12 RTVLVTGGAGYIGSHAVLQLL--LAGFRAVVVDNLNNSSELAVRRVAALAGDHSRNLAFH 69
Query: 63 KGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
K D+ + + + D ++HFA V S + NN+ GT LLE G
Sbjct: 70 KVDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMSAHG 129
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM-AYGRSYGLPV 181
++ + S+ VYG E L P NPY TK E + Y +
Sbjct: 130 -CKKLVFSSSAAVYGSPKNSPCT---EEFPLTPNNPYGKTKLVVEDICRDIYRTDPEWKI 185
Query: 182 ITTRGNNVYG----------PNQFPEKLIPKFILLAMRGLP-LPIHG------DGSNVRS 224
I R N G P P L+P +A+ P L I G DG+ VR
Sbjct: 186 ILLRYFNPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTILGNDYATRDGTGVRD 245
Query: 225 YLYCEDVAEAFEVVLHK----GEVG-HVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRF 279
Y++ D+A+ L K +G YN+GT K V+++ K K G +I
Sbjct: 246 YIHVVDLADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKIPLIIG- 304
Query: 280 VENRPFNDQRYF-LDDQKLKKLGWAERTLWEEGLKKTIEWYTNNPDYWGDV 329
RP + + F L + K+L W + +E + W + NP +G +
Sbjct: 305 -PRRPGDAEILFSLPAKAEKELNWKAKFGIDEMCRDQWNWASKNPYGYGSL 354
>AK109046
Length = 350
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 128/331 (38%), Gaps = 27/331 (8%)
Query: 1 MAAYEPKNILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCXXXXXXXXXXXXXXFK 60
MA I + G GFI SH A RL ++ + Y
Sbjct: 1 MATKTKLRIFVAGGGGFIGSHTAKRLKEEGHFVRVADWKRQHYFEDSQICDEFH------ 54
Query: 61 FVKGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFG----NSFEFTKNNIYGTHVLLE 116
D+ DL N + E +D + FAA G N NNI + ++E
Sbjct: 55 ----DVDLRDLNNCIKMCEGMDEVYDFAADM---GGMGFIQSNHSVILYNNIMISFNMVE 107
Query: 117 ACKVTGQIRRFIHVSTDEVYGETDE----DAVVGNHEASQLLPTNPYSATKAGAEMLVMA 172
A + +G ++RF + S+ +Y E + + + +A P + Y K E
Sbjct: 108 AARRSGSVKRFFYSSSACIYPEYRQLETANPGLKESDAWPAQPQDAYGLEKLVTEEFCKY 167
Query: 173 YGRSYGLPVITTRGNNVYGPNQF----PEKLIPKFILLAMR-GLPLPIHGDGSNVRSYLY 227
Y + +G+ R +N+YGP+ EK F A+ G + GDG RS+ Y
Sbjct: 168 YNKDFGIEFRIGRFHNIYGPHGTWKGGREKAPAAFCRKALVCGDVFEMWGDGEQTRSFCY 227
Query: 228 CEDVAEAFEVVLHKGEVGHVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRPFND 287
+D E + L + +V NIG+ + + D+A + G + +
Sbjct: 228 IDDCVEGV-LRLMRSDVREPINIGSEEMVSMNDMAHLVLDFAGKKDSTKLHHIPGPEGVR 286
Query: 288 QRYFLDDQKLKKLGWAERTLWEEGLKKTIEW 318
R + +KLGWA ++GLK+T +W
Sbjct: 287 GRNSDNTLIREKLGWAPIINLKDGLKRTFDW 317
>Os06g0187200 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 309
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 108/285 (37%), Gaps = 27/285 (9%)
Query: 62 VKGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
V GDI L+ L ++H AAQ V + N + ++N+ G LLE+CK
Sbjct: 21 VDGDINDGRLLAKLFDVVPFTHVLHLAAQAGVRYAMENPSSYVRSNVAGLVSLLESCKDA 80
Query: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
+ S+ VYG D H + P + Y+ATK E + Y YGL +
Sbjct: 81 DPQPAVVWASSSSVYGLNDAVPFSEAHRTDK--PASLYAATKKAGEAITHTYNHIYGLSI 138
Query: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV---RSYLYCEDVAEAFEVV 238
R VYGP P+ F ++G P+ ++ +V R + Y +D+
Sbjct: 139 TGLRFFTVYGPWGRPDMAYFFFTRNILQGKPVTVYRGRDHVDIARDFTYIDDIVRGCLAA 198
Query: 239 LHKGEVG-------------HVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRPF 285
L ++N+G + V + L K R V P
Sbjct: 199 LDTAGRSTGGGGRKRGAAPYRIFNLGNTSP---VTVPALVAMLERCLMVKARRHVVEMPG 255
Query: 286 NDQRYFLDDQ---KLKKLGWAERTLWEEGLKKTIEWYTNNPDYWG 327
N F ++LG+ T E GLKK + WY + Y+G
Sbjct: 256 NGDVPFTHANISLAREQLGYKPTTSLEMGLKKFVRWYLS---YYG 297
>Os06g0652400 Similar to GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
(GER1)
Length = 328
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 116/243 (47%), Gaps = 17/243 (6%)
Query: 92 HVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151
H +++F +F N+ +++A G +R+ + + + +Y + + N S
Sbjct: 85 HANSTF--PADFIAANLQIQTNVVDAALKCGSVRKLLFLGSSCIYPKFAPQPIPENSLLS 142
Query: 152 -QLLPTNP-YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP--NQFPEK--LIPKFI- 204
L PTN Y+ K + AY +G I+ N+YGP N PE ++P I
Sbjct: 143 GPLEPTNEWYAVAKIAGIKMCQAYRIQHGFDAISAMPTNLYGPQDNFHPENSHVLPALIR 202
Query: 205 ----LLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEVVL-HKGEVGHVYNIGTVKERRVI 259
A + + G GS +R +L+ +D+A+A ++ H + HV N+G+ E +
Sbjct: 203 RFHEAKASNAAEVVVWGTGSPLREFLHVDDLADAVIFLMDHYSGLEHV-NVGSGSEVTIK 261
Query: 260 DVAKDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQKLKKLGWAERTLWEEGLKKTIEWY 319
++A+ + ++ G + V + ++P R +D K++++GW + +EGL +T +WY
Sbjct: 262 ELAELVKEVVGFQGKLV--WDSSKPDGTPRKLMDSSKIQEMGWKPKVPLKEGLVETYKWY 319
Query: 320 TNN 322
N
Sbjct: 320 VEN 322
>Os03g0405000 Reticulon family protein
Length = 561
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 101/231 (43%), Gaps = 19/231 (8%)
Query: 10 LITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCXXXXXXXXXXXXXXFKFVKGDIASA 69
++TG GF A H+ L+R+ + + V D + + ASA
Sbjct: 15 VVTGGRGFAARHLVAMLLRS-GEWLVRVADLPPAIALDRDEEEGILGAALREGRAAYASA 73
Query: 70 DLVNYLLTT---ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
DL N E D + H AA D+S N N+ GT +++AC + +++R
Sbjct: 74 DLRNKAQVAAAFEGADVVFHMAAP---DSSINNFHLHYSVNVEGTKNVIDAC-IRCKVKR 129
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLP-----TNPYSATKAGAEMLVMAYGRSYGLPV 181
I+ S+ V D + G +A + +P + YS TKA AE LVM GL
Sbjct: 130 LIYTSSPSVV----FDGIHGIFDADESMPYPDKFNDSYSETKADAEKLVMKANGRDGLLT 185
Query: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVA 232
R ++++GP + L+P + A G I GDGSN + Y E+VA
Sbjct: 186 CCIRPSSIFGPGD--KLLVPSLVTAARAGKSKYIIGDGSNYYDFTYVENVA 234
>Os06g0652300 Similar to GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
(GER1)
Length = 347
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 112/255 (43%), Gaps = 21/255 (8%)
Query: 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDED 142
I+ A V S E+ N+ T +++A + G +R+ + +++ +Y D
Sbjct: 90 VILAAAKVGGVHASSAAPAEYLTENLRITVNVVDAARRCGSVRKLLVLASSTIY---PAD 146
Query: 143 AVVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ-F 195
A E S LL P Y+ K + A YGL I NN+YGP F
Sbjct: 147 APQPTPE-SALLTGPPAEGSEWYAIPKIAGIKMCQAVRAEYGLDAIAAAPNNLYGPRHPF 205
Query: 196 PEK-------LIPKFILLAMRGL-PLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVGHV 247
P + LI +F + G + + G G+ R + + +D+AEA V++ +
Sbjct: 206 PPEHSHVIPALIRRFHRAKLEGAGEVAVWGSGAAAREFTHVDDLAEAVVVLMERYSGEEH 265
Query: 248 YNIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQKLKKLGWAERTL 307
N+G+ +E V ++A+ + + G E V+ + RP R +D +++KLGW R
Sbjct: 266 VNVGSGEEVTVRELAEAVRGVVGY--EGVVAWDAARPEGVARRVVDSGRMRKLGWEPRVA 323
Query: 308 WEEGLKKTIEWYTNN 322
+G++ +Y +
Sbjct: 324 LRDGIQDLYRFYLRH 338
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,774,989
Number of extensions: 898612
Number of successful extensions: 1875
Number of sequences better than 1.0e-10: 24
Number of HSP's gapped: 1842
Number of HSP's successfully gapped: 24
Length of query: 675
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 567
Effective length of database: 11,396,689
Effective search space: 6461922663
Effective search space used: 6461922663
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)