Os09g0323000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to UDP-galactose 4-epimerase-like protein.
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Os09g0323000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to UDP-galactose 4-epimerase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.67 | 0.384 | 9.54 | -0.152 | 0.3 | 2.01 | -0.56 | 1.9 | 0.13 | 8.6 | 30.51 | 139 | -- | -- |
| 71.39 | 0.394 | 9.51 | 0.18 | 0.224 | 2.35 | -0.738 | -- | 0.18 | 9.61 | 36.65 | 156 | -- | -- |
| 67.53 | 0.383 | 9.54 | -0.198 | 0.297 | 1.96 | -- | 2 | 0.136 | 8.24 | 29.75 | 147 | -- | -- |
| 72.05 | 0.395 | 9.52 | 0.129 | 0.285 | 2.06 | -- | -- | 0.197 | 8.14 | 31.27 | 145 | -- | -- |
| 70.66 | 0.392 | 9.55 | -0.215 | -- | 2.09 | -- | 2.07 | 0.167 | -- | 30.15 | 216 | -- | -- |
| 119.45 | 0.512 | 9.58 | -0.335 | 0.783 | -- | 0.92 | -- | -0.152 | 4.56 | -- | -- | -- | -- |
| 121.49 | 0.516 | 9.58 | -0.34 | 0.795 | -- | -- | -- | -0.156 | 4.85 | -- | -- | -- | -- |
| 73.94 | 0.4 | 9.51 | 0.188 | -- | 2.16 | -- | -- | 0.237 | -- | 31.27 | 249 | -- | -- |
| 72.35 | 0.396 | 9.51 | -- | 0.289 | 1.94 | -- | -- | 0.168 | 7.61 | 31.22 | 159 | -- | -- |
| 154.9 | 0.582 | 9.59 | -0.311 | -- | -- | -- | -- | -0.136 | -- | -- | -- | -- | -- |
| 124.55 | 0.522 | 9.58 | -- | 0.789 | -- | -- | -- | -0.118 | 4.86 | -- | -- | -- | -- |
| 74.73 | 0.403 | 9.52 | -- | -- | 2.1 | -- | -- | 0.198 | -- | 31.38 | 247 | -- | -- |
| 157.45 | 0.586 | 9.58 | -- | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.12 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 3 | 65.76 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 4 | 65.79 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 12 | 66.40 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 27 | 67.59 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 29 | 67.69 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 36 | 67.99 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 47 | 68.37 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 51 | 68.46 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 21 |
| 54 | 68.56 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 65 | 68.80 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 69 | 68.86 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 99 | 69.54 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 111 | 69.72 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 127 | 70.07 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 18 |
| 153 | 70.22 | temperature | 30 | 1440 | < th | dose dependent | sin | 10 | NA |
| 190 | 70.37 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 192 | 70.38 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 194 | 70.38 | temperature | 15 | 1440 | > th | dose dependent | rect. | 19 | 15 |
| 219 | 70.44 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 238 | 70.47 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 419 | 70.79 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 439 | 70.83 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 20 |
| 456 | 70.86 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 469 | 70.88 | temperature | 25 | 1440 | < th | dose independent | rect. | 2 | 19 |
| 477 | 70.89 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 20 |
| 535 | 70.96 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 556 | 70.98 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 767 | 71.23 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 795 | 71.26 | temperature | 25 | 1440 | > th | dose independent | rect. | 2 | 19 |
| 808 | 71.27 | temperature | 25 | 1440 | > th | dose independent | rect. | 24 | 21 |