BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0323000 Os09g0323000|AK121426
(369 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0323000 Similar to UDP-galactose 4-epimerase-like protein 734 0.0
Os08g0374800 Similar to UDP-galactose 4-epimerase-like protein 639 0.0
Os05g0595100 Similar to UDPglucose 4-epimerase-like protein 567 e-162
Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2... 436 e-122
AK110765 282 2e-76
Os07g0139400 UDP-glucose 4-epimerase family protein 256 2e-68
Os08g0129700 UDP-glucose 4-epimerase family protein 253 2e-67
Os04g0618200 UDP-glucose 4-epimerase family protein 251 4e-67
Os08g0526100 NAD-dependent epimerase/dehydratase family pro... 108 7e-24
Os09g0504000 Similar to Nucleotide sugar epimerase-like pro... 101 9e-22
Os03g0249500 Similar to Nucleotide sugar epimerase-like pro... 90 3e-18
Os03g0278200 NAD-dependent epimerase/dehydratase family pro... 86 4e-17
Os03g0280800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35) 78 9e-15
Os02g0791500 Similar to Nucleotide sugar epimerase-like pro... 78 1e-14
Os01g0837300 UDP-glucuronic acid decarboxylase 73 3e-13
>Os09g0323000 Similar to UDP-galactose 4-epimerase-like protein
Length = 369
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/354 (100%), Positives = 354/354 (100%)
Query: 16 TSRTVLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDKARNLSLH 75
TSRTVLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDKARNLSLH
Sbjct: 16 TSRTVLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDKARNLSLH 75
Query: 76 KVDIRDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHG 135
KVDIRDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHG
Sbjct: 76 KVDIRDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHG 135
Query: 136 CKKLVFSSSAAVYGSPKNSPCTEEFPLTPHNPYGRTKLIAEEICRDIYHSDSEWSIILLR 195
CKKLVFSSSAAVYGSPKNSPCTEEFPLTPHNPYGRTKLIAEEICRDIYHSDSEWSIILLR
Sbjct: 136 CKKLVFSSSAAVYGSPKNSPCTEEFPLTPHNPYGRTKLIAEEICRDIYHSDSEWSIILLR 195
Query: 196 YFNPVGAHPSGYLGEDPCGIPNNLMPFVQQVAVGRRPSLTIFGNDYATKDGTGVRDYIHV 255
YFNPVGAHPSGYLGEDPCGIPNNLMPFVQQVAVGRRPSLTIFGNDYATKDGTGVRDYIHV
Sbjct: 196 YFNPVGAHPSGYLGEDPCGIPNNLMPFVQQVAVGRRPSLTIFGNDYATKDGTGVRDYIHV 255
Query: 256 VDLAEGHIAALRKLFESSIGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIGPRRPGD 315
VDLAEGHIAALRKLFESSIGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIGPRRPGD
Sbjct: 256 VDLAEGHIAALRKLFESSIGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIGPRRPGD 315
Query: 316 AEILFSSAAKAEREFKWKAKYGIEEMCRDQWNWASKNPFGYASPDSTKQNGHSH 369
AEILFSSAAKAEREFKWKAKYGIEEMCRDQWNWASKNPFGYASPDSTKQNGHSH
Sbjct: 316 AEILFSSAAKAEREFKWKAKYGIEEMCRDQWNWASKNPFGYASPDSTKQNGHSH 369
>Os08g0374800 Similar to UDP-galactose 4-epimerase-like protein
Length = 408
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/351 (86%), Positives = 327/351 (93%), Gaps = 1/351 (0%)
Query: 18 RTVLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDKARNLSLHKV 77
RTVLVTGGAGYIGSH VLQLL AGFR VV D+L NSSELAVRRVAALAGD +RNL+ HKV
Sbjct: 12 RTVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAGDHSRNLAFHKV 71
Query: 78 DIRDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCK 137
D+RDKG LEKVF+STRFDAVVHFAGLKAVGESVQKPLLYYD+NV GT+ LLEVM+AHGCK
Sbjct: 72 DLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMSAHGCK 131
Query: 138 KLVFSSSAAVYGSPKNSPCTEEFPLTPHNPYGRTKLIAEEICRDIYHSDSEWSIILLRYF 197
KLVFSSSAAVYGSPKNSPCTEEFPLTP+NPYG+TKL+ E+ICRDIY +D EW IILLRYF
Sbjct: 132 KLVFSSSAAVYGSPKNSPCTEEFPLTPNNPYGKTKLVVEDICRDIYRTDPEWKIILLRYF 191
Query: 198 NPVGAHPSGYLGEDPCGIPNNLMPFVQQVAVGRRPSLTIFGNDYATKDGTGVRDYIHVVD 257
NPVGAHPSGYLGEDPCGIPNNLMP+VQQVAVGRRP+LTI GNDYAT+DGTGVRDYIHVVD
Sbjct: 192 NPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTILGNDYATRDGTGVRDYIHVVD 251
Query: 258 LAEGHIAALRKLFE-SSIGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIGPRRPGDA 316
LA+GHIAAL+KLFE SSIGC+AYNLGTGKGTSVLEIV AFEK SGKKIPL+IGPRRPGDA
Sbjct: 252 LADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKIPLIIGPRRPGDA 311
Query: 317 EILFSSAAKAEREFKWKAKYGIEEMCRDQWNWASKNPFGYASPDSTKQNGH 367
EILFS AKAE+E WKAK+GI+EMCRDQWNWASKNP+GY S DSTKQNGH
Sbjct: 312 EILFSLPAKAEKELNWKAKFGIDEMCRDQWNWASKNPYGYGSLDSTKQNGH 362
>Os05g0595100 Similar to UDPglucose 4-epimerase-like protein
Length = 354
Score = 567 bits (1462), Expect = e-162, Method: Compositional matrix adjust.
Identities = 266/347 (76%), Positives = 299/347 (86%), Gaps = 2/347 (0%)
Query: 18 RTVLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDKARNLSLHKV 77
RT+LVTGGAGYIGSHTVLQLL GFRVVV D+L N+SELA+ RV LAG A NL KV
Sbjct: 7 RTILVTGGAGYIGSHTVLQLLQLGFRVVVLDNLDNASELAILRVRELAGHNANNLDFRKV 66
Query: 78 DIRDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCK 137
D+RDK L+++FSS RF+AV+HFAGLKAVGESVQKPLLYYD+N+ GTI LL+VMAAHGC
Sbjct: 67 DLRDKQALDQIFSSQRFEAVIHFAGLKAVGESVQKPLLYYDNNLIGTITLLQVMAAHGCT 126
Query: 138 KLVFSSSAAVYGSPKNSPCTEEFPLTPHNPYGRTKLIAEEICRDIYHSDSEWSIILLRYF 197
KLVFSSSA VYG PK PCTEE PL NPYGRTKL+ E++CRD++ SD W IILLRYF
Sbjct: 127 KLVFSSSATVYGWPKEVPCTEESPLCAMNPYGRTKLVIEDMCRDLHASDPNWKIILLRYF 186
Query: 198 NPVGAHPSGYLGEDPCGIPNNLMPFVQQVAVGRRPSLTIFGNDYATKDGTGVRDYIHVVD 257
NPVGAHPSGY+GEDPCGIPNNLMPFVQQVAVGRRP+LT++G DY TKDGTGVRDYIHVVD
Sbjct: 187 NPVGAHPSGYIGEDPCGIPNNLMPFVQQVAVGRRPALTVYGTDYNTKDGTGVRDYIHVVD 246
Query: 258 LAEGHIAALRKLFESS--IGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIGPRRPGD 315
LA+GHIAALRKL+E S IGC+ YNLGTGKGTSVLE+V AFEK SGKKIPLV RRPGD
Sbjct: 247 LADGHIAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGD 306
Query: 316 AEILFSSAAKAEREFKWKAKYGIEEMCRDQWNWASKNPFGYASPDST 362
AEI+++ AKAE+E KWKAKYG+EEMCRD WNWASKNP+GY SPDS+
Sbjct: 307 AEIVYAQTAKAEKELKWKAKYGVEEMCRDLWNWASKNPYGYGSPDSS 353
>Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)
(UDP-galactose 4-epimerase)
Length = 373
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/349 (59%), Positives = 264/349 (75%), Gaps = 4/349 (1%)
Query: 19 TVLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDK-ARNLSLHKV 77
+VLVTGGAGYIG+HTVL+LL GF V V D+ NS A+ RV +AG + L
Sbjct: 27 SVLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSARLDFIAG 86
Query: 78 DIRDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCK 137
D++ K +EKVF++ R+DAV+HFAGLKAVGESV P +YY++NVAGT+ L M +GCK
Sbjct: 87 DLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAMTKYGCK 146
Query: 138 KLVFSSSAAVYGSPKNSPCTEEFPLTPHNPYGRTKLIAEEICRDIYHSDSEWSIILLRYF 197
K+VFSSSA VYG P+ +PC E+ L+ NPYG TKL+ E R + +D E +ILLRYF
Sbjct: 147 KIVFSSSATVYGQPEKTPCVEDSKLSALNPYGTTKLVLENYFRQVQAADPEMRVILLRYF 206
Query: 198 NPVGAHPSGYLGEDPCGIPNNLMPFVQQVAVGRRPSLTIFGNDYATKDGTGVRDYIHVVD 257
NP+GAH SG +GEDP GIPNNL+P++QQVAVGRRP L ++G DY T+DGT +RDYIHVVD
Sbjct: 207 NPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRRPELNVYGVDYPTRDGTAIRDYIHVVD 266
Query: 258 LAEGHIAALRKLFES-SIGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIGPRRPGDA 316
LA+GHIAAL KLF + IGC AYNLGTG GT+VLE+V AFE+ SGKKIP+ I PRRPGD
Sbjct: 267 LADGHIAALEKLFATPDIGCVAYNLGTGCGTTVLEVVKAFEEASGKKIPIKICPRRPGDC 326
Query: 317 EILFSSAAKAEREFKWKAKYGIEEMCRDQWNWASKNPFGYASPDSTKQN 365
+++S KA++E W A++GIE+MCRDQWNWA KNP+GY++ + +QN
Sbjct: 327 TEVYASTDKAKKELGWSARFGIEDMCRDQWNWAKKNPYGYSA--NAEQN 373
>AK110765
Length = 375
Score = 282 bits (722), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/365 (44%), Positives = 213/365 (58%), Gaps = 28/365 (7%)
Query: 20 VLVTGGAGYIGSHTVL-QLLAAGFRVVVADSLGNSSELAVRRVAALAGDKAR-------- 70
+L+ GGAGYIGSH L LL +RV V D+ N+ A +R+ +A D+
Sbjct: 8 ILIPGGAGYIGSHVALVTLLTRKYRVTVLDNYHNAFPAACKRLEQIAIDELPAGASQQDK 67
Query: 71 ---NLSLHKVDIRDKGGLEKVFSSTRFD----AVVHFAGLKAVGESVQKPLLYYDHNVAG 123
+ + K D+R K + KVF + + D V+ A LKAVGES + P+ YYD NV G
Sbjct: 68 DDCKVDVFKGDLRSKDDIRKVFDAYKGDDKIWGVILCAALKAVGESSEIPIDYYDVNVGG 127
Query: 124 TIILLEVMAAHGCKKLVFSSSAAVYGSPKNSPCTEEFPLTPHNPYGRTKLIAEEICRDIY 183
+ LL+VM +GC +LV+SSSA VYG+P P E L P + YGRTK ++E I RD+
Sbjct: 128 LVNLLKVMHDNGCNRLVYSSSATVYGTPPKVPIPESTRLAPESVYGRTKWMSEIIIRDVC 187
Query: 184 HSDSEWSIILLRYFNPVGAHPSGYLGEDPCGIPNNLMPFVQQVAVG--RRPSLTIFGNDY 241
+ E+ I LRYFNP GAH SG +GEDP G P NL+P + Q+AVG R L +FGNDY
Sbjct: 188 DAYPEFRAIGLRYFNPAGAHKSGKIGEDPRGKPGNLLPLLAQMAVGKYREGGLKVFGNDY 247
Query: 242 ATKDGTGVRDYIHVVDLAEGHIAALRKLFESSIGC----------QAYNLGTGKGTSVLE 291
T DGT VRDYIH+ DLA GH+ A+ L I +A+NLG G G SVL
Sbjct: 248 PTPDGTCVRDYIHIEDLAGGHVNAVEALERDDIFAADKTETHGKYRAFNLGKGVGMSVLN 307
Query: 292 IVNAFEKVSGKKIPLVIGPRRPGDAEILFSSAAKAEREFKWKAKYGIEEMCRDQWNWASK 351
+V+A KVSG + P I RR GD L + + AE+E +KA +++M +D W W S
Sbjct: 308 MVDAMRKVSGYEFPHTIVDRRTGDVPDLTADPSLAEKELGFKATRSLDDMAQDLWRWQSN 367
Query: 352 NPFGY 356
NP GY
Sbjct: 368 NPQGY 372
>Os07g0139400 UDP-glucose 4-epimerase family protein
Length = 421
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/354 (40%), Positives = 200/354 (56%), Gaps = 22/354 (6%)
Query: 20 VLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDKARNLSLHKVDI 79
VLVTGGAGYIGSH L+LL FRV + D+L + A++ + L + R L D+
Sbjct: 75 VLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLFSEPGR-LQFIYADL 133
Query: 80 RDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCKKL 139
D + ++F+ FDAV+HFA + VGES +PL YY + + T+++LE MAAH + L
Sbjct: 134 GDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAMAAHNVRTL 193
Query: 140 VFSSSAAVYGSPKNSPCTEEFPLTPHNPYGRTKLIAEEICRDIYHS-DSEWSIILLRYFN 198
++SS+ A YG P+ P TE P P NPYG+ K +AE+I D S ++ ++++LRYFN
Sbjct: 194 IYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSKKADMAVMILRYFN 253
Query: 199 PVGAHPSGYLGEDPCGIPNNLMPFVQQ----------VAVGRRPSLTIFGNDYATKDGTG 248
+G+ P G LGE P P +++ A+G P L + G DY T DGT
Sbjct: 254 VIGSDPEGRLGEAP-------KPELREHGRISGACFDAALGIIPGLKVKGTDYETPDGTC 306
Query: 249 VRDYIHVVDLAEGHIAALRKLFESSIGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVI 308
VRDYI V DL + H+ AL K +G YN+GTGKG SV E V A +K +G I +
Sbjct: 307 VRDYIDVTDLVDAHVKALNKAERGKVGI--YNVGTGKGRSVKEFVEACKKATGVDIKVDY 364
Query: 309 GPRRPGDAEILFSSAAKAEREFKWKAKY-GIEEMCRDQWNWASKNPFGYASPDS 361
PRRPGD ++S AK E W A++ + E R W W K+ GY P +
Sbjct: 365 FPRRPGDYAEVYSDPAKINSELNWTAQHTDLLESLRVAWTWQKKHRSGYGPPQA 418
>Os08g0129700 UDP-glucose 4-epimerase family protein
Length = 406
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/350 (40%), Positives = 196/350 (56%), Gaps = 21/350 (6%)
Query: 20 VLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDKARNLSLHKVDI 79
VLVTGGAGYIGSH L+LL +RV + D+L + AV+ + L R L D+
Sbjct: 66 VLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQPGR-LQFIYADL 124
Query: 80 RDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCKKL 139
D+ + K+F+ FDAV+HFA + VGES +PL YY + + T+++LE MA+HG K L
Sbjct: 125 GDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHGVKTL 184
Query: 140 VFSSSAAVYGSPKNSPCTEEFPLTPHNPYGRTKLIAEEICRDIYHSDSEWSIILLRYFNP 199
++SS+ A YG P+ P E P NPYG+ K +AE+I D + ++++LRYFN
Sbjct: 185 IYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKDMAVMILRYFNV 244
Query: 200 VGAHPSGYLGEDPCGIPNNLMPFVQQ----------VAVGRRPSLTIFGNDYATKDGTGV 249
+G+ P G LGE P P +++ A+G P L + G DY T DGT +
Sbjct: 245 IGSDPEGRLGEAP-------RPELREHGRISGACFDAALGIIPGLKVKGTDYPTTDGTCI 297
Query: 250 RDYIHVVDLAEGHIAALRKLFESSIGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIG 309
RDYI V DL + H+ AL K S +G YN+GTG+G SV E V+A +K +G I +
Sbjct: 298 RDYIDVTDLVDAHVKALNKAEPSKVGI--YNVGTGRGRSVKEFVDACKKATGVNIKIEYL 355
Query: 310 PRRPGDAEILFSSAAKAEREFKWKAKY-GIEEMCRDQWNWASKNPFGYAS 358
RRPGD ++S K E W A+Y ++E W W +P GY S
Sbjct: 356 SRRPGDYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSHPRGYGS 405
>Os04g0618200 UDP-glucose 4-epimerase family protein
Length = 428
Score = 251 bits (642), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 143/350 (40%), Positives = 193/350 (55%), Gaps = 22/350 (6%)
Query: 20 VLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDKARNLSLHKVDI 79
VLVTGGAGYIGSH L+LL +RV + D+L + AVR + L + R L D+
Sbjct: 89 VLVTGGAGYIGSHATLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPEPGR-LQFIYADL 147
Query: 80 RDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCKKL 139
D + K+FS FDAV+HFA + VGES +PL YY + + T+ +LE MAA+ K L
Sbjct: 148 GDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYNVKTL 207
Query: 140 VFSSSAAVYGSPKNSPCTEEFPLTPHNPYGRTKLIAEEICRDIYHSDSEWSIILLRYFNP 199
++SS+ A YG P P TE P P NPYG+ K +AE+I D + SE ++++LRYFN
Sbjct: 208 IYSSTCATYGEPDTMPITEATPQNPINPYGKAKKMAEDIILD-FSKRSEMAVMILRYFNV 266
Query: 200 VGAHPSGYLGEDPCGIPNNLMPFVQQ----------VAVGRRPSLTIFGNDYATKDGTGV 249
+G+ P G LGE P P +++ A+G P L + G DY T DGT +
Sbjct: 267 IGSDPGGRLGEAP-------RPELREHGRISGACFDAALGIIPGLKVRGTDYPTADGTCI 319
Query: 250 RDYIHVVDLAEGHIAALRKLFESSIGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIG 309
RDYI V DL + H+ AL K +G YN+GTG G SV E V A + +G I +
Sbjct: 320 RDYIDVTDLVDAHVKALDKAQPGKVGI--YNVGTGHGRSVKEFVEACKSATGASIKVSFL 377
Query: 310 PRRPGDAEILFSSAAKAEREFKWKAKY-GIEEMCRDQWNWASKNPFGYAS 358
RRPGD ++S +K E W A+Y + E W W +P GY S
Sbjct: 378 TRRPGDYAEVYSDPSKIHDELNWTARYIDLRESLSTAWKWQKAHPNGYGS 427
>Os08g0526100 NAD-dependent epimerase/dehydratase family protein
Length = 478
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 34/346 (9%)
Query: 19 TVLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDKARNLSLHKVD 78
+VLVTG AG++G+H L L A G VV D+ + + +++R A +R +++ D
Sbjct: 125 SVLVTGAAGFVGAHCSLALRARGDGVVGLDNFNSYYDPSLKR-ARQRLLASRGVAVLDAD 183
Query: 79 IRDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCKK 138
I D LE++F + RF V+H A V +++ P Y NVAG + + EV A H +
Sbjct: 184 INDAALLERLFDAARFTHVLHLAAQAGVRYAMRAPQTYVASNVAGLVSVFEVAAKHADPQ 243
Query: 139 --LVFSSSAAVYGSPKNSPCTEEFPL-TPHNPYGRTKLIAEEICRDIYHSDSEWSIILLR 195
+V++SS++VYG ++P +EE P + Y TK E I Y+ SI LR
Sbjct: 244 PAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAH-AYNHIYGLSITGLR 302
Query: 196 YFNPVGAHPSGYLGEDPCGIPN-NLMPFVQQVAVGRRPSLTIFGNDYATKDGTGV-RDYI 253
+F G P G P+ F + + G +T+F T DG RD+
Sbjct: 303 FFTVYG----------PWGRPDMAYFSFARSIVAGE--PITLF----RTADGADARRDFT 346
Query: 254 HVVDLAEGHIAALRKLFESS----------IGCQAYNLGTGKGTSVLEIVNAFEKVSGKK 303
++ D+ +G + AL ES+ + YNLG V +V EK+ G+K
Sbjct: 347 YIDDVVKGCLGALDTAGESTGTKSGKKRGPAPLRVYNLGNTSPVPVTRMVAILEKLLGRK 406
Query: 304 I-PLVIGPRRPGDAEILFSSAAKAEREFKWKAKYGIEEMCRDQWNW 348
V+ GD ++ + A R+F ++ ++ R +W
Sbjct: 407 ANKRVVTMPSNGDVPFTHANVSHAARDFGYRPATPLDAGLRRFVDW 452
>Os09g0504000 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 498
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 151/346 (43%), Gaps = 35/346 (10%)
Query: 20 VLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGN--SSELAVRRVAALAGDKARNLSLHKV 77
VLVTG AG++G+H L L A G V+ D+ EL R LAG R + +
Sbjct: 128 VLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKRARQRLLAG---RGVLVLDA 184
Query: 78 DIRDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCK 137
DI D LEK+F F V+H A V +++ P Y NVAG + +LEV A H
Sbjct: 185 DINDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNVAGLVTVLEVAAKHADP 244
Query: 138 K--LVFSSSAAVYGSPKNSPCTEEFPLT-PHNPYGRTKLIAEEICRDIYHSDSEWSIILL 194
+ +V++SS++VYG ++P +EE P + Y TK E I Y+ SI L
Sbjct: 245 QPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAH-TYNHIYGLSITGL 303
Query: 195 RYFNPVGAHPSGYLGEDPCGIPNNLMPFVQQVAVGRRPSLTIFGNDYATKDGTGVRDYIH 254
R+F G P G P+ F + V P +T+F A RD+ +
Sbjct: 304 RFFTVYG----------PWGRPDMAYFFFAKSIVSGEP-ITLF---RAADGADARRDFTY 349
Query: 255 VVDLAEGHIAALRKLFESSIG-----------CQAYNLGTGKGTSVLEIVNAFEKVSGKK 303
+ D+ +G + AL +S+ + YNLG V +V EK+ GKK
Sbjct: 350 IDDVVKGCLGALDTSGKSTGSSKSGKKSGPAPLRVYNLGNTSPVPVTRMVAILEKLLGKK 409
Query: 304 I-PLVIGPRRPGDAEILFSSAAKAEREFKWKAKYGIEEMCRDQWNW 348
++ GD ++ A +F ++ ++ R +W
Sbjct: 410 ANKRIVAMPSNGDVPFTHANVTHAAHDFGYRPTTSLDAGLRHFVDW 455
>Os03g0249500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 484
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 147/343 (42%), Gaps = 26/343 (7%)
Query: 19 TVLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRR-VAALAGDKARNLSLHKV 77
TVLVTG AG++G H L G V+ D+ + + A++R AAL + +
Sbjct: 120 TVLVTGAAGFVGCHAAAALRRRGDGVLGLDNFNDYYDPALKRGRAALLARSG--VYVVDG 177
Query: 78 DIRDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVM-AAHGC 136
DI D L K+F F V+H A V ++ P+ Y NV G + LLE A+
Sbjct: 178 DIADAELLAKLFDVVPFTHVLHLAAQAGVRHALVDPMSYVRANVGGFVALLEAARMANPQ 237
Query: 137 KKLVFSSSAAVYGSPKNSPCTE-EFPLTPHNPYGRTKLIAEEICRDIYHSDSEWSIILLR 195
+V++SS++VYG + P +E + P + Y TK EEI Y+ S+ LR
Sbjct: 238 PAIVWASSSSVYGLNSHVPFSEHDRTDRPASLYAATKKAGEEIAH-AYNHIYGLSLTALR 296
Query: 196 YFNPVGAHPSGYLGEDPCGIPNNLMPFVQQVAVGRRPSLTIFGNDYATKDGTGVRDYIHV 255
+F G P G P+ F + + RP T T RD+ ++
Sbjct: 297 FFTVYG----------PWGRPDMAYFFFTRDILAGRPITVYESAGGGTHQTTISRDFTYI 346
Query: 256 VDLAEGHIAALRKLFESS---------IGCQAYNLGTGKGTSVLEIVNAFEK-VSGKKIP 305
D+ +G + AL S+ + YNLG V ++V+ EK + K +
Sbjct: 347 DDIVKGCVGALDTAGRSTGSGGKKRGPAPFRTYNLGNTSPVPVTQLVDLLEKLLKVKAVR 406
Query: 306 LVIGPRRPGDAEILFSSAAKAEREFKWKAKYGIEEMCRDQWNW 348
++ R GD ++ + A+RE ++ ++ + W
Sbjct: 407 KIVKMPRNGDVPYTHANISLAQRELGYRPSTDLQTGVKKFVRW 449
>Os03g0278200 NAD-dependent epimerase/dehydratase family protein
Length = 675
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 139/344 (40%), Gaps = 35/344 (10%)
Query: 18 RTVLVTGGAGYIGSHTVLQLLA--AGFRVVVADSLGNSSELAVRRVAALAGDKARNLSLH 75
+ +L+TG AG+I SH +L+ +++VV D L S L+ + + N
Sbjct: 7 KNILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCSSLSNLNPSR----PSPNFKFV 62
Query: 76 KVDIRDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHG 135
K DI + + ++ D ++HFA V S + +N+ GT +LLE G
Sbjct: 63 KGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
Query: 136 -CKKLVFSSSAAVYGSPKNSPCT---EEFPLTPHNPYGRTKLIAEEICRDIYHSDSEWSI 191
++ + S+ VYG E L P NPY TK AE + Y +
Sbjct: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM-AYGRSYGLPV 181
Query: 192 ILLRYFNPVGAHPSGYLGEDPCGIPNNLMPFVQQVAVGRRPSLTIFGNDYATKDGTGVRD 251
I R N G P P L+P +A+ P L I G DG+ VR
Sbjct: 182 ITTRGNNVYG----------PNQFPEKLIPKFILLAMRGLP-LPIHG------DGSNVRS 224
Query: 252 YIHVVDLAEGHIAALRKLFESSIGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIG-- 309
Y++ D+AE L K +G YN+GT K V+++ K+ G VI
Sbjct: 225 YLYCEDVAEAFEVVLHK---GEVG-HVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFV 280
Query: 310 PRRPGDAEILFSSAAKAEREFKWKAKYGIEEMCRDQWNWASKNP 353
RP + + F K ++ W + EE + W + NP
Sbjct: 281 ENRPFNDQRYFLDDQKL-KKLGWAERTLWEEGLKKTIEWYTNNP 323
>Os03g0280800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35)
Length = 396
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 140/327 (42%), Gaps = 41/327 (12%)
Query: 20 VLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDKARNLSLHKVDI 79
V+VTGGAG++GSH V +LLA G V+V D+ + V AR+L+ + ++
Sbjct: 87 VVVTGGAGFVGSHLVDELLARGDSVIVVDNFFTGRKENV----------ARHLADPRFEL 136
Query: 80 RDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCKKL 139
+E + D + H A + P+ NV GT+ +L + G +
Sbjct: 137 IRHDVVEPIL--LEVDQIYHLACPASPVHYKFNPIKTIKTNVMGTLNMLGLAKRVGA-RF 193
Query: 140 VFSSSAAVYGSPKNSPCTEEF-----PLTPHNPYGRTKLIAEEICRDIYHSDSEWSIILL 194
+ +S++ VYG P P E + P+ + Y K AE + D YH + + +
Sbjct: 194 LLTSTSEVYGDPLEHPQKESYWGHVNPIGVRSCYDEGKRTAETLTMD-YHRGAGVEVRIA 252
Query: 195 RYFNPVGAHPSGYLGEDPCGIPNNLMPFVQQVAVGRRPSLTIFGNDYATKDGTGVRDYIH 254
R FN G + D + +N FV Q R+ +T++G DG R + +
Sbjct: 253 RIFNTYGPR----MCLDDGRVVSN---FVAQTL--RKQPMTVYG------DGKQTRSFQY 297
Query: 255 VVDLAEGHIAALRKLFESS-IGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIGPRRP 313
V DL +G I L ES IG +NLG ++LE+ ++ + P
Sbjct: 298 VSDLVDGLIT----LMESEHIG--PFNLGNPGEFTMLELAQVVKETIDPSARVEFKPNTA 351
Query: 314 GDAEILFSSAAKAEREFKWKAKYGIEE 340
D + +KA+ W+ K +++
Sbjct: 352 DDPHMRKPDISKAKSLLHWEPKISLKQ 378
>Os02g0791500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 437
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 157/355 (44%), Gaps = 54/355 (15%)
Query: 19 TVLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDKARN--LSLHK 76
+VLVTG AG++G+H L L G VV D+ + + +++ KAR L+ H
Sbjct: 98 SVLVTGAAGFVGTHCSLALRKRGDGVVGIDNFNSYYDPSLK--------KARRSLLASHG 149
Query: 77 V-----DIRDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVM 131
V DI D L K+F F V+H A V +++ P Y N+AG + LLE
Sbjct: 150 VFVIEGDINDGRLLAKLFDVVPFTHVLHLAAQAGVRYAMENPASYVHSNIAGLVTLLEAC 209
Query: 132 A-AHGCKKLVFSSSAAVYGSPKNSPCTE-EFPLTPHNPYGRTKLIAEEICRDIYHSDSEW 189
A +V++SS++VYG P TE + P + Y TK EEI Y+
Sbjct: 210 KDADPQPAIVWASSSSVYGLNDKVPFTESDRTDQPASLYAATKKAGEEITH-TYNHIYGL 268
Query: 190 SIILLRYFNPVGAHPSGYLGEDPCGIPN-NLMPFVQQVAVGRRPSLTIFGNDYATKDGTG 248
SI LR+F G P G P+ F + + G+ +T+ Y K+
Sbjct: 269 SITGLRFFTVYG----------PWGRPDMAYFSFTRNILQGK--PITV----YRGKNRVD 312
Query: 249 V-RDYIHVVDLAEGHIAALRKLFESS---------IGCQAYNLGTGKGTSVLEIVNAFEK 298
+ RD+ ++ D+ +G + +L +S+ + +NLG +V +V+ EK
Sbjct: 313 LARDFTYIDDIVKGCLGSLDTAGKSTGTGGKKRGPAPYRIFNLGNTSPVTVPNLVSILEK 372
Query: 299 ---VSGKKIPLVIGPRRPGDAEILFSSA--AKAEREFKWKAKYGIEEMCRDQWNW 348
V KK + + PG+ ++ F+ A + A ++ +K ++ + W
Sbjct: 373 HLRVKAKKNVVEM----PGNGDVPFTHANISLARQQLGYKPTTNLDVGLKKFVKW 423
>Os01g0837300 UDP-glucuronic acid decarboxylase
Length = 410
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 133/325 (40%), Gaps = 39/325 (12%)
Query: 21 LVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDKARNLSLHKVDIR 80
+VTGGAG++GSH V +LL G V+V D+ + V A +L + ++
Sbjct: 104 VVTGGAGFVGSHLVDRLLEQGDSVIVVDNFFTGRKDNV----------AHHLRNPRFELL 153
Query: 81 DKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCKKLV 140
+E + D + H A + P+ NV GT+ +L + G + L+
Sbjct: 154 RHDVVEPILLEV--DRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLL 211
Query: 141 FSSSAAVYGSPKNSPCTEEF-----PLTPHNPYGRTKLIAEEICRDIYHSDSEWSIILLR 195
+S++ VYG P P E + P+ + Y K AE + D YH + + R
Sbjct: 212 -TSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMD-YHRGGGVEVRIAR 269
Query: 196 YFNPVGAHPSGYLGEDPCGIPNNLMPFVQQVAVGRRPSLTIFGNDYATKDGTGVRDYIHV 255
FN G + D + +N FV Q RR +T++G DG R + +V
Sbjct: 270 IFNTYGPR----MCLDDGRVVSN---FVAQAL--RRQPMTVYG------DGKQTRSFQYV 314
Query: 256 VDLAEGHIAALRKLFESSIGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIGPRRPGD 315
DL G +A + IG +NLG ++LE+ ++ + P D
Sbjct: 315 SDLVAGLMALMEG---DHIG--PFNLGNPGEFTMLELAQVVKETIDPMATIEFKPNTADD 369
Query: 316 AEILFSSAAKAEREFKWKAKYGIEE 340
+ KA+ +W+ K + E
Sbjct: 370 PHMRKPDITKAKHLLRWEPKVSLRE 394
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,750,702
Number of extensions: 541225
Number of successful extensions: 1403
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 1374
Number of HSP's successfully gapped: 15
Length of query: 369
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 267
Effective length of database: 11,709,973
Effective search space: 3126562791
Effective search space used: 3126562791
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)