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Os02g0791500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Nucleotide sugar epimerase-like protein (UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.07 (0.0313) R2 : 0.556
β1 : -1.2 (0.115) R2dD : 0.112 R2D : 0.0663
β2 : 1.42 (0.0755) R2dC : 0.361 R2C : 0.404
β3 : 0.723 (0.0844) R2dE : 0.0786 R2E : 0.0896
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0269 (0.0679) R2dN8 : 0.000231 R2N8 : 0.000213
σ : 0.581
deviance : 155.76
__
_____
C
peak time of C : 1.36
E
wheather : temperature
threshold : 33
memory length : 1176
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
155.11 0.585 8.14 -1.78 1.44 1.12 -0.173 -3.58 0.0293 1.36 32.32 1255 -- --
157.92 0.585 8.06 -1.21 1.48 0.828 0.109 -- 0.0489 1.32 32.58 1563 -- --
155.23 0.58 8.14 -1.79 1.44 1.12 -- -3.68 0.0291 1.37 32.31 1254 -- --
155.76 0.581 8.07 -1.2 1.42 0.723 -- -- 0.0269 1.36 33 1176 -- --
277.62 0.776 8.11 -1.77 -- 1.38 -- -3.47 0.109 -- 31.4 1141 -- --
180.14 0.629 8.11 -1.04 1.54 -- -0.00809 -- -0.0974 1.36 -- -- -- --
180.14 0.629 8.11 -1.04 1.54 -- -- -- -0.0973 1.36 -- -- -- --
277.54 0.776 8.05 -1.22 -- 0.997 -- -- 0.108 -- 31.74 1116 -- --
192.27 0.646 8.05 -- 1.44 0.591 -- -- 0.123 1.33 33.54 1064 -- --
325.46 0.843 8.08 -0.976 -- -- -- -- -0.0651 -- -- -- -- --
208.44 0.675 8.08 -- 1.52 -- -- -- 0.0181 1.34 -- -- -- --
314.87 0.826 8.02 -- -- 0.856 -- -- 0.2 -- 33.1 1052 -- --
350.57 0.874 8.06 -- -- -- -- -- 0.0431 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 147.79 temperature 10.0 270 > th dose dependent rect. 24 9
2 148.90 wind 9.0 270 < th dose dependent rect. 9 15
4 149.44 wind 9.0 270 < th dose independent rect. 19 19
5 149.58 temperature 10.0 270 > th dose dependent rect. 14 17
7 149.69 temperature 30.0 90 < th dose dependent rect. 20 7
9 149.80 precipitation 0.1 270 < th dose independent rect. 9 15
10 149.80 precipitation 0.1 270 < th dose dependent rect. 9 15
11 149.89 wind 1.0 270 > th dose independent rect. 14 5
12 149.91 wind 9.0 270 < th dose independent rect. 9 15
13 149.93 temperature 15.0 270 > th dose independent rect. 19 19
14 149.94 temperature 15.0 270 > th dose independent rect. 19 7
15 149.96 humidity 50.0 270 > th dose dependent rect. 1 8
16 150.05 temperature 10.0 270 > th dose independent rect. 14 5
18 150.05 atmosphere 1010.0 270 < th dose independent rect. 14 5
21 150.05 atmosphere 995.0 270 > th dose independent rect. 19 19
27 150.23 atmosphere 995.0 10 > th dose independent rect. 20 20
36 150.52 humidity 60.0 270 > th dose independent rect. 24 9
37 150.54 atmosphere 995.0 270 > th dose independent rect. 18 21
38 150.55 precipitation 0.1 270 < th dose independent rect. 19 19
39 150.55 precipitation 0.1 270 < th dose dependent rect. 19 19
41 150.58 wind 9.0 90 < th dose dependent rect. 19 8
42 150.59 atmosphere 995.0 270 > th dose independent rect. 5 10
46 150.69 wind 9.0 90 < th dose dependent rect. 11 15
47 150.71 temperature 15.0 270 > th dose independent rect. 9 15
51 150.79 temperature 30.0 10 < th dose dependent rect. 20 8
56 150.81 wind 9.0 270 < th dose independent rect. 14 5
57 150.81 wind 9.0 270 < th dose independent rect. 18 21
64 150.95 atmosphere 1015.0 270 < th dose independent rect. 24 9
65 150.95 precipitation 0.1 270 < th dose independent rect. 24 9
66 150.95 precipitation 0.1 270 < th dose dependent rect. 24 9
67 150.97 wind 9.0 270 < th dose independent rect. 24 9
68 150.98 temperature 10.0 270 > th dose independent rect. 24 9
70 150.98 atmosphere 995.0 270 > th dose independent rect. 24 9
75 151.00 temperature 15.0 270 > th dose independent rect. 2 17
78 151.11 wind 7.0 270 < th dose independent rect. 6 9
79 151.11 humidity 50.0 270 > th dose independent rect. 9 16
83 151.20 wind 9.0 270 < th dose independent rect. 19 7
85 151.20 temperature 30.0 270 < th dose independent rect. 19 7
86 151.20 humidity 50.0 270 > th dose independent rect. 19 7
87 151.20 atmosphere 995.0 270 > th dose independent rect. 19 7
88 151.20 radiation 1.0 270 < th dose independent rect. 19 7
94 151.20 atmosphere 1015.0 270 < th dose independent rect. 2 17
95 151.20 radiation 1.0 270 < th dose dependent rect. 19 7
102 151.24 wind 1.0 270 > th dose independent rect. 14 15
105 151.26 humidity 50.0 90 > th dose dependent rect. 20 7
108 151.34 atmosphere 1015.0 270 < th dose independent rect. 15 15
130 151.49 temperature 30.0 270 < th dose independent rect. 24 9
131 151.50 wind 1.0 270 > th dose independent rect. 15 3
132 151.50 temperature 10.0 10 > th dose dependent rect. 16 17
138 151.53 wind 9.0 90 < th dose dependent rect. 9 18
143 151.60 radiation 40.0 270 < th dose independent rect. 15 3
144 151.60 humidity 50.0 270 > th dose independent rect. 19 19
146 151.63 temperature 10.0 270 > th dose independent rect. 15 3
148 151.63 atmosphere 1010.0 270 < th dose independent rect. 15 3
151 151.63 temperature 10.0 270 > th dose independent rect. 18 21
153 151.66 atmosphere 995.0 90 > th dose independent rect. 9 7
157 151.74 precipitation 0.1 270 < th dose independent rect. 14 5
160 151.74 precipitation 0.1 270 < th dose dependent rect. 14 5
178 151.95 precipitation 0.1 270 < th dose independent rect. 6 9
179 151.95 precipitation 0.1 270 < th dose dependent rect. 6 9
181 151.97 precipitation 0.1 270 < th dose independent rect. 18 21
182 151.97 precipitation 0.1 270 < th dose dependent rect. 18 21
183 151.98 precipitation 0.1 270 < th dose independent rect. 19 7
184 151.98 precipitation 0.1 270 < th dose dependent rect. 19 7
191 152.03 radiation 40.0 270 < th dose independent rect. 14 5
195 152.08 radiation 40.0 270 < th dose independent rect. 15 15
205 152.14 temperature 10.0 270 > th dose independent rect. 6 9
206 152.14 atmosphere 1015.0 270 < th dose independent rect. 6 9
207 152.14 temperature 10.0 270 > th dose independent rect. 15 15
220 152.30 atmosphere 995.0 270 > th dose independent rect. 9 15
224 152.37 radiation 40.0 270 < th dose independent rect. 24 9
241 152.47 wind 9.0 270 < th dose independent rect. 15 3
258 152.52 wind 9.0 270 < th dose independent rect. 2 17
300 152.69 temperature 15.0 10 > th dose independent rect. 20 20
307 152.75 radiation 1.0 270 > th dose independent rect. 6 9
326 152.91 wind 9.0 270 < th dose independent rect. 15 15
335 152.95 temperature 15.0 10 > th dose independent rect. 20 8
381 153.18 radiation 40.0 90 < th dose independent rect. 3 17
389 153.24 wind 9.0 10 < th dose independent rect. 20 20
406 153.29 precipitation 0.1 270 < th dose independent rect. 15 3
408 153.29 precipitation 0.1 270 < th dose dependent rect. 15 3
437 153.40 precipitation 0.1 270 < th dose independent rect. 2 17
440 153.40 precipitation 0.1 270 < th dose dependent rect. 2 17
444 153.43 atmosphere 1015.0 270 < th dose independent rect. 14 19
448 153.47 wind 7.0 10 < th dose independent rect. 20 8
459 153.49 temperature 10.0 270 > th dose dependent rect. 14 6
499 153.69 wind 9.0 10 < th dose dependent rect. 20 7
533 153.83 humidity 50.0 10 > th dose dependent rect. 20 7
544 153.90 atmosphere 1015.0 10 < th dose independent rect. 16 17
551 153.94 temperature 30.0 10 < th dose independent rect. 20 8
552 153.94 humidity 50.0 10 > th dose independent rect. 20 8
555 153.94 atmosphere 995.0 10 > th dose independent rect. 20 8
556 153.94 radiation 1.0 10 < th dose independent rect. 20 8
561 153.94 temperature 10.0 10 > th dose independent rect. 4 16
563 153.94 atmosphere 1015.0 10 < th dose independent rect. 4 16
565 153.94 radiation 1.0 10 < th dose dependent rect. 20 8
575 153.97 atmosphere 995.0 270 > th dose independent rect. 14 5
611 154.07 atmosphere 995.0 90 > th dose independent rect. 11 15
630 154.14 atmosphere 1015.0 270 < th dose dependent rect. 14 5
650 154.26 radiation 30.0 10 < th dose independent rect. 16 4
651 154.27 wind 7.0 90 < th dose independent rect. 9 7
656 154.30 wind 9.0 270 < th dose dependent rect. 9 5
657 154.31 temperature 10.0 10 > th dose independent rect. 16 4
659 154.31 atmosphere 1010.0 10 < th dose independent rect. 16 4
667 154.32 radiation 1.0 270 > th dose independent rect. 4 11
689 154.40 wind 3.0 270 < th dose independent rect. 9 15
692 154.41 radiation 40.0 14400 > th dose dependent rect. 14 19
698 154.43 wind 1.0 270 > th dose dependent rect. 14 5
714 154.49 precipitation 0.1 10 < th dose independent rect. 20 8
716 154.49 precipitation 0.1 10 < th dose dependent rect. 20 8
718 154.50 wind 1.0 10 > th dose independent rect. 16 4
738 154.54 atmosphere 995.0 270 > th dose independent rect. 15 3
759 154.58 wind 7.0 270 < th dose dependent rect. 21 3
768 154.60 temperature 10.0 270 > th dose dependent rect. 15 3
771 154.63 radiation 40.0 14400 > th dose dependent rect. 14 2
788 154.64 wind 7.0 90 < th dose independent rect. 9 18
794 154.67 wind 9.0 270 < th dose dependent rect. 7 8
835 154.76 atmosphere 995.0 90 > th dose independent rect. 9 18
848 154.80 temperature 20.0 90 > th dose independent rect. 16 17
856 154.81 wind 7.0 270 < th dose independent rect. 9 5
865 154.84 humidity 60.0 270 > th dose dependent rect. 21 3
869 154.87 atmosphere 1000.0 10 > th dose independent rect. 16 4
900 154.95 precipitation 0.1 10 < th dose independent rect. 16 4
903 154.95 precipitation 0.1 10 < th dose dependent rect. 16 4
906 154.96 precipitation 0.1 10 < th dose independent rect. 4 16
907 154.96 precipitation 0.1 10 < th dose dependent rect. 4 16
918 154.99 wind 1.0 270 > th dose dependent rect. 15 3
945 155.07 wind 9.0 10 < th dose independent rect. 16 4
951 155.08 precipitation 0.1 90 < th dose independent rect. 9 18
954 155.08 precipitation 0.1 90 < th dose dependent rect. 9 18