Os08g0129700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucose 4-epimerase family protein.
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Os08g0129700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucose 4-epimerase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.52 | 0.369 | 11.5 | -1.54 | 0.969 | 0.741 | 0.299 | 0.235 | -0.0611 | 7.28 | 82.51 | 1241 | -- | -- |
| 61.58 | 0.365 | 11.5 | -1.56 | 0.969 | 0.758 | 0.294 | -- | -0.0594 | 7.27 | 81.69 | 1240 | -- | -- |
| 61.74 | 0.366 | 11.5 | -1.54 | 0.977 | 0.75 | -- | 0.217 | -0.0602 | 7.34 | 82 | 1224 | -- | -- |
| 61.8 | 0.366 | 11.5 | -1.55 | 0.97 | 0.763 | -- | -- | -0.0612 | 7.33 | 81.91 | 1236 | -- | -- |
| 108.99 | 0.486 | 11.5 | -1.52 | -- | 0.787 | -- | 0.0497 | -0.0599 | -- | 85.09 | 1350 | -- | -- |
| 74.27 | 0.404 | 11.5 | -1.44 | 0.972 | -- | 0.427 | -- | -0.084 | 6.71 | -- | -- | -- | -- |
| 74.71 | 0.405 | 11.5 | -1.44 | 0.973 | -- | -- | -- | -0.0849 | 6.79 | -- | -- | -- | -- |
| 108.99 | 0.486 | 11.5 | -1.52 | -- | 0.793 | -- | -- | -0.0548 | -- | 85.03 | 1350 | -- | -- |
| 121.6 | 0.514 | 11.5 | -- | 0.961 | 0.68 | -- | -- | 0.0235 | 7.22 | 103.6 | 2654 | -- | -- |
| 124.22 | 0.521 | 11.5 | -1.42 | -- | -- | -- | -- | -0.066 | -- | -- | -- | -- | -- |
| 129.16 | 0.532 | 11.5 | -- | 0.956 | -- | -- | -- | 0.0752 | 6.88 | -- | -- | -- | -- |
| 151.47 | 0.573 | 11.5 | -- | -- | 1 | -- | -- | 0.193 | -- | 68 | 47520 | -- | -- |
| 177.09 | 0.621 | 11.5 | -- | -- | -- | -- | -- | 0.0911 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.18 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 4 | 58.33 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 9 | 58.67 | wind | 1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 10 | 58.73 | wind | 1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 12 | 58.76 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 28 | 59.08 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 29 | 59.08 | humidity | 90 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 51 | 59.82 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 52 | 59.85 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 54 | 59.87 | humidity | 80 | 720 | < th | dose independent | rect. | 20 | 1 |
| 59 | 59.93 | humidity | 80 | 720 | < th | dose independent | rect. | 18 | 4 |
| 62 | 60.03 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 17 |
| 80 | 60.11 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 95 | 60.12 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 96 | 60.14 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 14 |
| 150 | 60.81 | humidity | 60 | 1440 | < th | dose independent | rect. | 16 | 17 |
| 154 | 60.85 | humidity | 60 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 160 | 60.91 | humidity | 60 | 1440 | > th | dose independent | rect. | 16 | 17 |
| 161 | 60.91 | humidity | 80 | 1440 | < th | dose dependent | sin | 11 | NA |
| 182 | 60.94 | humidity | 60 | 1440 | > th | dose independent | rect. | 16 | 5 |
| 186 | 60.95 | humidity | 60 | 1440 | > th | dose independent | rect. | 16 | 12 |
| 194 | 60.98 | humidity | 60 | 1440 | > th | dose independent | rect. | 16 | 9 |
| 261 | 61.20 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 280 | 61.26 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 291 | 61.34 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 298 | 61.40 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 9 |
| 313 | 61.41 | humidity | 60 | 1440 | < th | dose independent | sin | 12 | NA |
| 357 | 61.53 | humidity | 60 | 1440 | > th | dose independent | sin | 12 | NA |
| 417 | 61.64 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 501 | 61.86 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 503 | 61.88 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 509 | 61.91 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 672 | 62.31 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 833 | 62.57 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 21 |
| 984 | 62.77 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 19 |