BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0129700 Os08g0129700|AK065715
(406 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0129700 UDP-glucose 4-epimerase family protein 843 0.0
Os04g0618200 UDP-glucose 4-epimerase family protein 688 0.0
Os07g0139400 UDP-glucose 4-epimerase family protein 669 0.0
Os08g0374800 Similar to UDP-galactose 4-epimerase-like protein 268 4e-72
Os05g0595100 Similar to UDPglucose 4-epimerase-like protein 257 8e-69
Os09g0323000 Similar to UDP-galactose 4-epimerase-like protein 253 2e-67
Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2... 252 4e-67
AK110765 196 2e-50
Os03g0278200 NAD-dependent epimerase/dehydratase family pro... 105 8e-23
Os03g0249500 Similar to Nucleotide sugar epimerase-like pro... 78 2e-14
Os02g0791500 Similar to Nucleotide sugar epimerase-like pro... 75 9e-14
Os08g0526100 NAD-dependent epimerase/dehydratase family pro... 73 4e-13
Os09g0504000 Similar to Nucleotide sugar epimerase-like pro... 67 3e-11
>Os08g0129700 UDP-glucose 4-epimerase family protein
Length = 406
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/406 (100%), Positives = 406/406 (100%)
Query: 1 MIPLNRRASQTRGGMEYFDARRKPHNVGKVIAALVLTTLCIFILKQSPGFGGSSVFSRHE 60
MIPLNRRASQTRGGMEYFDARRKPHNVGKVIAALVLTTLCIFILKQSPGFGGSSVFSRHE
Sbjct: 1 MIPLNRRASQTRGGMEYFDARRKPHNVGKVIAALVLTTLCIFILKQSPGFGGSSVFSRHE 60
Query: 61 PGVTHVLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQPGRLQFI 120
PGVTHVLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQPGRLQFI
Sbjct: 61 PGVTHVLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQPGRLQFI 120
Query: 121 YADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHG 180
YADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHG
Sbjct: 121 YADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHG 180
Query: 181 VKTLIYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKDMAVMILR 240
VKTLIYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKDMAVMILR
Sbjct: 181 VKTLIYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKDMAVMILR 240
Query: 241 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYPTTDGTCIRDY 300
YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYPTTDGTCIRDY
Sbjct: 241 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYPTTDGTCIRDY 300
Query: 301 IDVTDLVDAHVKALNKAEPSKVGIYNVGTGRGRSVKEFVDACKKATGVNIKIEYLSRRPG 360
IDVTDLVDAHVKALNKAEPSKVGIYNVGTGRGRSVKEFVDACKKATGVNIKIEYLSRRPG
Sbjct: 301 IDVTDLVDAHVKALNKAEPSKVGIYNVGTGRGRSVKEFVDACKKATGVNIKIEYLSRRPG 360
Query: 361 DYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSHPRGYGSN 406
DYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSHPRGYGSN
Sbjct: 361 DYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSHPRGYGSN 406
>Os04g0618200 UDP-glucose 4-epimerase family protein
Length = 428
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/392 (82%), Positives = 358/392 (91%), Gaps = 1/392 (0%)
Query: 14 GMEYFDARRKPHNVGKVIAALVLTTLCIFILKQSPGFGGSSVFSRHEPGVTHVLVTGGAG 73
GM++ D+RRKP+ VGK A+ LT +CI +LKQSPGF +SVFSRHE GVTHVLVTGGAG
Sbjct: 37 GMDFGDSRRKPNVVGKFTVAVALTVMCIIVLKQSPGFTSTSVFSRHEIGVTHVLVTGGAG 96
Query: 74 YIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQPGRLQFIYADLGDQKTVNKI 133
YIGSHA+LRLL+DNYRVTIVDNLSRGNMGAV+VLQ LFP+PGRLQFIYADLGD K VNKI
Sbjct: 97 YIGSHATLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPEPGRLQFIYADLGDAKAVNKI 156
Query: 134 FAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHGVKTLIYSSTCATY 193
F+ENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTL +LEAMA++ VKTLIYSSTCATY
Sbjct: 157 FSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYNVKTLIYSSTCATY 216
Query: 194 GEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKDMAVMILRYFNVIGSDPEGRL 253
GEP+ MPI E T Q PINPYGKAKKMAEDIILDF+K R +MAVMILRYFNVIGSDP GRL
Sbjct: 217 GEPDTMPITEATPQNPINPYGKAKKMAEDIILDFSK-RSEMAVMILRYFNVIGSDPGGRL 275
Query: 254 GEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYPTTDGTCIRDYIDVTDLVDAHVKA 313
GEAPRPELREHGRISGACFDAALGIIPGLKV+GTDYPT DGTCIRDYIDVTDLVDAHVKA
Sbjct: 276 GEAPRPELREHGRISGACFDAALGIIPGLKVRGTDYPTADGTCIRDYIDVTDLVDAHVKA 335
Query: 314 LNKAEPSKVGIYNVGTGRGRSVKEFVDACKKATGVNIKIEYLSRRPGDYAEVYSDPTKIN 373
L+KA+P KVGIYNVGTG GRSVKEFV+ACK ATG +IK+ +L+RRPGDYAEVYSDP+KI+
Sbjct: 336 LDKAQPGKVGIYNVGTGHGRSVKEFVEACKSATGASIKVSFLTRRPGDYAEVYSDPSKIH 395
Query: 374 TELNWTAQYTDLKESLSVAWRWQKSHPRGYGS 405
ELNWTA+Y DL+ESLS AW+WQK+HP GYGS
Sbjct: 396 DELNWTARYIDLRESLSTAWKWQKAHPNGYGS 427
>Os07g0139400 UDP-glucose 4-epimerase family protein
Length = 421
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/414 (78%), Positives = 357/414 (86%), Gaps = 10/414 (2%)
Query: 1 MIPLNRRASQTR--------GGMEYFDARRKPHNVGKVIAALVLTTLCIFILKQSPGFGG 52
M+P NR Q R M++ D +RKP + K++ +LT +C+ +L Q P
Sbjct: 1 MLPTNRNRPQQRPARSWYFISDMDFSDPKRKPRYLSKILMVALLTAMCVVMLTQPPCHRR 60
Query: 53 S-SVFSRHEPGVTHVLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELF 111
+ SVFS HEPGVTHVLVTGGAGYIGSHA+LRLLKD++RVTIVDNLSRGNMGA+KVLQ LF
Sbjct: 61 TPSVFSIHEPGVTHVLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLF 120
Query: 112 PQPGRLQFIYADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLL 171
+PGRLQFIYADLGD K VN+IFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTL+
Sbjct: 121 SEPGRLQFIYADLGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLV 180
Query: 172 ILEAMASHGVKTLIYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGR 231
+LEAMA+H V+TLIYSSTCATYGEPEKMPI E T Q PINPYGKAKKMAEDIILDF+K +
Sbjct: 181 VLEAMAAHNVRTLIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSK 240
Query: 232 K-DMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYP 290
K DMAVMILRYFNVIGSDPEGRLGEAP+PELREHGRISGACFDAALGIIPGLKVKGTDY
Sbjct: 241 KADMAVMILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAALGIIPGLKVKGTDYE 300
Query: 291 TTDGTCIRDYIDVTDLVDAHVKALNKAEPSKVGIYNVGTGRGRSVKEFVDACKKATGVNI 350
T DGTC+RDYIDVTDLVDAHVKALNKAE KVGIYNVGTG+GRSVKEFV+ACKKATGV+I
Sbjct: 301 TPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGKGRSVKEFVEACKKATGVDI 360
Query: 351 KIEYLSRRPGDYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSHPRGYG 404
K++Y RRPGDYAEVYSDP KIN+ELNWTAQ+TDL ESL VAW WQK H GYG
Sbjct: 361 KVDYFPRRPGDYAEVYSDPAKINSELNWTAQHTDLLESLRVAWTWQKKHRSGYG 414
>Os08g0374800 Similar to UDP-galactose 4-epimerase-like protein
Length = 408
Score = 268 bits (686), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 203/355 (57%), Gaps = 22/355 (6%)
Query: 62 GVTHVLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQPGR-LQFI 120
GV VLVTGGAGYIGSHA L+LL +R +VDNL+ + AV+ + L R L F
Sbjct: 10 GVRTVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAGDHSRNLAFH 69
Query: 121 YADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHG 180
DL D+ + K+FA FDAV+HFA + VGES +PL YY N + T+ +LE M++HG
Sbjct: 70 KVDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMSAHG 129
Query: 181 VKTLIYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKDMAVMILR 240
K L++SS+ A YG P+ P E P NPYGK K + EDI D + + +++LR
Sbjct: 130 CKKLVFSSSAAVYGSPKNSPCTEEFPLTPNNPYGKTKLVVEDICRDIYRTDPEWKIILLR 189
Query: 241 YFNVIGSDPEGRLGEAP-------RPELREHGRISGACFDAALGIIPGLKVKGTDYPTTD 293
YFN +G+ P G LGE P P +++ A+G P L + G DY T D
Sbjct: 190 YFNPVGAHPSGYLGEDPCGIPNNLMPYVQQ----------VAVGRRPALTILGNDYATRD 239
Query: 294 GTCIRDYIDVTDLVDAHVKALNKA-EPSKVGI--YNVGTGRGRSVKEFVDACKKATGVNI 350
GT +RDYI V DL D H+ AL K E S +G YN+GTG+G SV E V A +KA+G I
Sbjct: 240 GTGVRDYIHVVDLADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKI 299
Query: 351 KIEYLSRRPGDYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSHPRGYGS 405
+ RRPGD ++S P K ELNW A++ + E W W +P GYGS
Sbjct: 300 PLIIGPRRPGDAEILFSLPAKAEKELNWKAKF-GIDEMCRDQWNWASKNPYGYGS 353
>Os05g0595100 Similar to UDPglucose 4-epimerase-like protein
Length = 354
Score = 257 bits (657), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 204/352 (57%), Gaps = 23/352 (6%)
Query: 66 VLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQ-PGRLQFIYADL 124
+LVTGGAGYIGSH L+LL+ +RV ++DNL + A+ ++EL L F DL
Sbjct: 9 ILVTGGAGYIGSHTVLQLLQLGFRVVVLDNLDNASELAILRVRELAGHNANNLDFRKVDL 68
Query: 125 GDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHGVKTL 184
D++ +++IF+ F+AV+HFA + VGES +PL YY N T+ +L+ MA+HG L
Sbjct: 69 RDKQALDQIFSSQRFEAVIHFAGLKAVGESVQKPLLYYDNNLIGTITLLQVMAAHGCTKL 128
Query: 185 IYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKDMAVMILRYFNV 244
++SS+ YG P+++P E + +NPYG+ K + ED+ D + +++LRYFN
Sbjct: 129 VFSSSATVYGWPKEVPCTEESPLCAMNPYGRTKLVIEDMCRDLHASDPNWKIILLRYFNP 188
Query: 245 IGSDPEGRLGEAP-------RPELREHGRISGACFDAALGIIPGLKVKGTDYPTTDGTCI 297
+G+ P G +GE P P +++ A+G P L V GTDY T DGT +
Sbjct: 189 VGAHPSGYIGEDPCGIPNNLMPFVQQ----------VAVGRRPALTVYGTDYNTKDGTGV 238
Query: 298 RDYIDVTDLVDAHVKALNK--AEPSKVG--IYNVGTGRGRSVKEFVDACKKATGVNIKIE 353
RDYI V DL D H+ AL K + ++G +YN+GTG+G SV E V A +KA+G I +
Sbjct: 239 RDYIHVVDLADGHIAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV 298
Query: 354 YLSRRPGDYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSHPRGYGS 405
+ RRPGD VY+ K EL W A+Y ++E W W +P GYGS
Sbjct: 299 FAGRRPGDAEIVYAQTAKAEKELKWKAKY-GVEEMCRDLWNWASKNPYGYGS 349
>Os09g0323000 Similar to UDP-galactose 4-epimerase-like protein
Length = 369
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/350 (40%), Positives = 196/350 (56%), Gaps = 21/350 (6%)
Query: 66 VLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQPGR-LQFIYADL 124
VLVTGGAGYIGSH L+LL +RV + D+L + AV+ + L R L D+
Sbjct: 20 VLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDKARNLSLHKVDI 79
Query: 125 GDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHGVKTL 184
D+ + K+F+ FDAV+HFA + VGES +PL YY + + T+++LE MA+HG K L
Sbjct: 80 RDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCKKL 139
Query: 185 IYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKDMAVMILRYFNV 244
++SS+ A YG P+ P E P NPYG+ K +AE+I D + ++++LRYFN
Sbjct: 140 VFSSSAAVYGSPKNSPCTEEFPLTPHNPYGRTKLIAEEICRDIYHSDSEWSIILLRYFNP 199
Query: 245 IGSDPEGRLGEAP-------RPELREHGRISGACFDAALGIIPGLKVKGTDYPTTDGTCI 297
+G+ P G LGE P P +++ A+G P L + G DY T DGT +
Sbjct: 200 VGAHPSGYLGEDPCGIPNNLMPFVQQ----------VAVGRRPSLTIFGNDYATKDGTGV 249
Query: 298 RDYIDVTDLVDAHVKALNKAEPSKVGI--YNVGTGRGRSVKEFVDACKKATGVNIKIEYL 355
RDYI V DL + H+ AL K S +G YN+GTG+G SV E V+A +K +G I +
Sbjct: 250 RDYIHVVDLAEGHIAALRKLFESSIGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIG 309
Query: 356 SRRPGDYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSHPRGYGS 405
RRPGD ++S K E W A+Y ++E W W +P GY S
Sbjct: 310 PRRPGDAEILFSSAAKAEREFKWKAKY-GIEEMCRDQWNWASKNPFGYAS 358
>Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)
(UDP-galactose 4-epimerase)
Length = 373
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/354 (40%), Positives = 198/354 (55%), Gaps = 25/354 (7%)
Query: 66 VLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELF--PQPGRLQFIYAD 123
VLVTGGAGYIG+H LRLL+ + VT+VDN A+ ++ + RL FI D
Sbjct: 28 VLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSARLDFIAGD 87
Query: 124 LGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHGVKT 183
L + + K+FA +DAV+HFA + VGES P YY N + T+ + AM +G K
Sbjct: 88 LKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAMTKYGCKK 147
Query: 184 LIYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKDMAVMILRYFN 243
+++SS+ YG+PEK P VE ++ +NPYG K + E+ +M V++LRYFN
Sbjct: 148 IVFSSSATVYGQPEKTPCVEDSKLSALNPYGTTKLVLENYFRQVQAADPEMRVILLRYFN 207
Query: 244 VIGSDPEGRLGEAPR-------PELREHGRISGACFDAALGIIPGLKVKGTDYPTTDGTC 296
IG+ G +GE PR P +++ A+G P L V G DYPT DGT
Sbjct: 208 PIGAHRSGDIGEDPRGIPNNLLPYIQQ----------VAVGRRPELNVYGVDYPTRDGTA 257
Query: 297 IRDYIDVTDLVDAHVKALNK--AEPSKVGI--YNVGTGRGRSVKEFVDACKKATGVNIKI 352
IRDYI V DL D H+ AL K A P +G YN+GTG G +V E V A ++A+G I I
Sbjct: 258 IRDYIHVVDLADGHIAALEKLFATPD-IGCVAYNLGTGCGTTVLEVVKAFEEASGKKIPI 316
Query: 353 EYLSRRPGDYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSHPRGYGSN 406
+ RRPGD EVY+ K EL W+A++ +++ W W K +P GY +N
Sbjct: 317 KICPRRPGDCTEVYASTDKAKKELGWSARF-GIEDMCRDQWNWAKKNPYGYSAN 369
>AK110765
Length = 375
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/372 (34%), Positives = 185/372 (49%), Gaps = 35/372 (9%)
Query: 66 VLVTGGAGYIGSHASL-RLLKDNYRVTIVDNLSRGNMGAVKVLQEL----FPQPG----- 115
+L+ GGAGYIGSH +L LL YRVT++DN A K L+++ P
Sbjct: 8 ILIPGGAGYIGSHVALVTLLTRKYRVTVLDNYHNAFPAACKRLEQIAIDELPAGASQQDK 67
Query: 116 ---RLQFIYADLGDQKTVNKIF----AENAFDAVMHFAAVAYVGESTLEPLRYYHNITSN 168
++ DL + + K+F ++ V+ AA+ VGES+ P+ YY
Sbjct: 68 DDCKVDVFKGDLRSKDDIRKVFDAYKGDDKIWGVILCAALKAVGESSEIPIDYYDVNVGG 127
Query: 169 TLLILEAMASHGVKTLIYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFT 228
+ +L+ M +G L+YSS+ YG P K+PI E+TR P + YG+ K M+E II D
Sbjct: 128 LVNLLKVMHDNGCNRLVYSSSATVYGTPPKVPIPESTRLAPESVYGRTKWMSEIIIRDVC 187
Query: 229 KGRKDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGII--PGLKVKG 286
+ + LRYFN G+ G++GE PR + G + A+G GLKV G
Sbjct: 188 DAYPEFRAIGLRYFNPAGAHKSGKIGEDPR---GKPGNLLPLLAQMAVGKYREGGLKVFG 244
Query: 287 TDYPTTDGTCIRDYIDVTDLVDAHVKALNKAEPS------------KVGIYNVGTGRGRS 334
DYPT DGTC+RDYI + DL HV A+ E K +N+G G G S
Sbjct: 245 NDYPTPDGTCVRDYIHIEDLAGGHVNAVEALERDDIFAADKTETHGKYRAFNLGKGVGMS 304
Query: 335 VKEFVDACKKATGVNIKIEYLSRRPGDYAEVYSDPTKINTELNWTAQYTDLKESLSVAWR 394
V VDA +K +G + RR GD ++ +DP+ EL + A + L + WR
Sbjct: 305 VLNMVDAMRKVSGYEFPHTIVDRRTGDVPDLTADPSLAEKELGFKATRS-LDDMAQDLWR 363
Query: 395 WQKSHPRGYGSN 406
WQ ++P+GYG
Sbjct: 364 WQSNNPQGYGEQ 375
>Os03g0278200 NAD-dependent epimerase/dehydratase family protein
Length = 675
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 168/357 (47%), Gaps = 44/357 (12%)
Query: 59 HEPGVTHVLVTGGAGYIGSHASLRLLKD--NYRVTIVDNLSRGNMGAVKVLQELFPQPGR 116
+EP ++L+TG AG+I SH + RL+++ +Y++ ++D L ++ L P P
Sbjct: 4 YEP--KNILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDY--CSSLSNLNPSRPSPN- 58
Query: 117 LQFIYADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAM 176
+F+ D+ VN + + D +MHFAA +V S + N T ++LEA
Sbjct: 59 FKFVKGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 118
Query: 177 ASHG-VKTLIYSSTCATYGEPEKMPIV---ETTRQLPINPYGKAKKMAEDIILDFTKGRK 232
G ++ I+ ST YGE ++ +V E ++ LP NPY K AE +++ + GR
Sbjct: 119 KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAY--GRS 176
Query: 233 -DMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYPT 291
+ V+ R NV G + + E P+ I+ L ++G P
Sbjct: 177 YGLPVITTRGNNVYGPN---QFPEKLIPKF----------------IL--LAMRGLPLPI 215
Query: 292 T-DGTCIRDYIDVTDLVDAHVKALNKAEPSKVG-IYNVGTGRGRSVKEFVDACKKATGVN 349
DG+ +R Y+ D+ +A L+K E VG +YN+GT + R V + K G++
Sbjct: 216 HGDGSNVRSYLYCEDVAEAFEVVLHKGE---VGHVYNIGTVKERRVIDVAKDICKLFGLD 272
Query: 350 IK--IEYLSRRPGDYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSHPRGYG 404
+ I ++ RP + + D K+ +L W A+ T +E L W ++P +G
Sbjct: 273 TEKVIRFVENRPFNDQRYFLDDQKLK-KLGW-AERTLWEEGLKKTIEWYTNNPDYWG 327
>Os03g0249500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 484
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 148/350 (42%), Gaps = 41/350 (11%)
Query: 66 VLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQPGRLQFIYADLG 125
VLVTG AG++G HA+ L + V +DN + A+K + + + D+
Sbjct: 121 VLVTGAAGFVGCHAAAALRRRGDGVLGLDNFNDYYDPALKRGRAALLARSGVYVVDGDIA 180
Query: 126 DQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLLILEAMASHGVKTL 184
D + + K+F F V+H AA A V + ++P+ Y N+ L+ A ++ +
Sbjct: 181 DAELLAKLFDVVPFTHVLHLAAQAGVRHALVDPMSYVRANVGGFVALLEAARMANPQPAI 240
Query: 185 IYSSTCATYGEPEKMPIVETTR-QLPINPYGKAKKMAEDIILDFTKGRKDMAVMILRYFN 243
+++S+ + YG +P E R P + Y KK E+I + +++ LR+F
Sbjct: 241 VWASSSSVYGLNSHVPFSEHDRTDRPASLYAATKKAGEEIAHAYNH-IYGLSLTALRFFT 299
Query: 244 VIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYPTTDG-----TCIR 298
V G P G RP++ A F I+ G + T Y + G T R
Sbjct: 300 VYG--PWG------RPDM--------AYFFFTRDILAGRPI--TVYESAGGGTHQTTISR 341
Query: 299 DYIDVTDLVDAHVKALNKA-----------EPSKVGIYNVGTGRGRSVKEFVDACKKATG 347
D+ + D+V V AL+ A P+ YN+G V + VD +K
Sbjct: 342 DFTYIDDIVKGCVGALDTAGRSTGSGGKKRGPAPFRTYNLGNTSPVPVTQLVDLLEKLLK 401
Query: 348 VNI--KIEYLSRRPGDYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRW 395
V KI + R GD +++ + EL + TDL+ + RW
Sbjct: 402 VKAVRKIVKMPRN-GDVPYTHANISLAQRELGYRPS-TDLQTGVKKFVRW 449
>Os02g0791500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 437
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 33/300 (11%)
Query: 66 VLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQPGRLQFIYADLG 125
VLVTG AG++G+H SL L K V +DN + ++K + + I D+
Sbjct: 99 VLVTGAAGFVGTHCSLALRKRGDGVVGIDNFNSYYDPSLKKARRSLLASHGVFVIEGDIN 158
Query: 126 DQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHGVK-TL 184
D + + K+F F V+H AA A V + P Y H+ + + +LEA + +
Sbjct: 159 DGRLLAKLFDVVPFTHVLHLAAQAGVRYAMENPASYVHSNIAGLVTLLEACKDADPQPAI 218
Query: 185 IYSSTCATYGEPEKMPIVETTR-QLPINPYGKAKKMAEDIILDFTKGRKDMAVMILRYFN 243
+++S+ + YG +K+P E+ R P + Y KK E+I + +++ LR+F
Sbjct: 219 VWASSSSVYGLNDKVPFTESDRTDQPASLYAATKKAGEEITHTYNH-IYGLSITGLRFFT 277
Query: 244 VIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYPTTDGTCI-RDYID 302
V G P G RP++ A F I+ G + T Y + + RD+
Sbjct: 278 VYG--PWG------RPDM--------AYFSFTRNILQGKPI--TVYRGKNRVDLARDFTY 319
Query: 303 VTDLVDAHVKALNKA-----------EPSKVGIYNVGTGRGRSVKEFVDACKKATGVNIK 351
+ D+V + +L+ A P+ I+N+G +V V +K V K
Sbjct: 320 IDDIVKGCLGSLDTAGKSTGTGGKKRGPAPYRIFNLGNTSPVTVPNLVSILEKHLRVKAK 379
>Os08g0526100 NAD-dependent epimerase/dehydratase family protein
Length = 478
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 36/306 (11%)
Query: 58 RHEPGVTHVLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQPGRL 117
R + G++ VLVTG AG++G+H SL L V +DN + ++K ++ +
Sbjct: 119 RRDGGLS-VLVTGAAGFVGAHCSLALRARGDGVVGLDNFNSYYDPSLKRARQRLLASRGV 177
Query: 118 QFIYADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMA 177
+ AD+ D + ++F F V+H AA A V + P Y + + + + E A
Sbjct: 178 AVLDADINDAALLERLFDAARFTHVLHLAAQAGVRYAMRAPQTYVASNVAGLVSVFEVAA 237
Query: 178 SHG--VKTLIYSSTCATYGEPEKMPIVETTR-QLPINPYGKAKKMAEDIILDFTKGRKDM 234
H ++++S+ + YG P E R P + Y KK E I + +
Sbjct: 238 KHADPQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAHAYNH-IYGL 296
Query: 235 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYPTTDG 294
++ LR+F V G P G RP++ A F A I+ G + T + T DG
Sbjct: 297 SITGLRFFTVYG--PWG------RPDM--------AYFSFARSIVAGEPI--TLFRTADG 338
Query: 295 T-CIRDYIDVTDLVDAHVKALNKA------------EPSKVGIYNVGTGRGRSVKEFVDA 341
RD+ + D+V + AL+ A P+ + +YN+G V V
Sbjct: 339 ADARRDFTYIDDVVKGCLGALDTAGESTGTKSGKKRGPAPLRVYNLGNTSPVPVTRMVAI 398
Query: 342 CKKATG 347
+K G
Sbjct: 399 LEKLLG 404
>Os09g0504000 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 498
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 130/308 (42%), Gaps = 39/308 (12%)
Query: 58 RHEPGVTHVLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVK-VLQELFPQPGR 116
R + G+ VLVTG AG++G+H SL L V +DN + +K Q L G
Sbjct: 121 RKDGGIA-VLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKRARQRLLAGRGV 179
Query: 117 LQFIYADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAM 176
L + AD+ D + K+F F V+H AA A V + P Y + + + +LE
Sbjct: 180 L-VLDADINDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNVAGLVTVLEVA 238
Query: 177 ASHG--VKTLIYSSTCATYGEPEKMPIVETTR-QLPINPYGKAKKMAEDIILDFTKGRKD 233
A H ++++S+ + YG P E R P + Y KK E I +
Sbjct: 239 AKHADPQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAHTYNH-IYG 297
Query: 234 MAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYPTTD 293
+++ LR+F V G P G RP++ A F A I+ G + T + D
Sbjct: 298 LSITGLRFFTVYG--PWG------RPDM--------AYFFFAKSIVSGEPI--TLFRAAD 339
Query: 294 GT-CIRDYIDVTDLVDAHVKALN-------------KAEPSKVGIYNVGTGRGRSVKEFV 339
G RD+ + D+V + AL+ K+ P+ + +YN+G V V
Sbjct: 340 GADARRDFTYIDDVVKGCLGALDTSGKSTGSSKSGKKSGPAPLRVYNLGNTSPVPVTRMV 399
Query: 340 DACKKATG 347
+K G
Sbjct: 400 AILEKLLG 407
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.137 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,496,253
Number of extensions: 629737
Number of successful extensions: 1343
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 1314
Number of HSP's successfully gapped: 13
Length of query: 406
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 303
Effective length of database: 11,657,759
Effective search space: 3532300977
Effective search space used: 3532300977
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)