Os05g0595100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to UDPglucose 4-epimerase-like protein.
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Os05g0595100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to UDPglucose 4-epimerase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.55 | 0.392 | 10.1 | 2.24 | 1.16 | -1.82 | -0.127 | 2.74 | 0.671 | 7.69 | 20.24 | 3759 | -- | -- |
| 74.38 | 0.402 | 10.2 | 1.74 | 1.18 | -1.87 | -0.195 | -- | 0.61 | 7.88 | 16.76 | 6518 | -- | -- |
| 69.46 | 0.388 | 10.1 | 2.28 | 1.15 | -1.82 | -- | 2.98 | 0.68 | 7.71 | 20.67 | 3679 | -- | -- |
| 73.99 | 0.401 | 10.2 | 1.69 | 1.22 | -1.76 | -- | -- | 0.572 | 8.02 | 17.53 | 5995 | -- | -- |
| 138.56 | 0.548 | 10.1 | 2.76 | -- | -2.14 | -- | 5.33 | 0.719 | -- | 23.25 | 3570 | -- | -- |
| 150.57 | 0.575 | 10.3 | 0.752 | 1.25 | -- | -0.179 | -- | 0.104 | 8.19 | -- | -- | -- | -- |
| 150.66 | 0.575 | 10.3 | 0.747 | 1.25 | -- | -- | -- | 0.104 | 8.18 | -- | -- | -- | -- |
| 150.58 | 0.572 | 10.2 | 1.73 | -- | -1.99 | -- | -- | 0.663 | -- | 15.98 | 6475 | -- | -- |
| 120.41 | 0.511 | 10.3 | -- | 1.24 | -1.11 | -- | -- | 0.192 | 7.82 | 22.05 | 3142 | -- | -- |
| 236.55 | 0.719 | 10.4 | 0.757 | -- | -- | -- | -- | 0.118 | -- | -- | -- | -- | -- |
| 165.37 | 0.602 | 10.3 | -- | 1.25 | -- | -- | -- | 0.0207 | 8.14 | -- | -- | -- | -- |
| 147.61 | 0.566 | 10.3 | -- | -- | -1.91 | -- | -- | 0.302 | -- | 21.57 | 641 | -- | -- |
| 251.65 | 0.74 | 10.4 | -- | -- | -- | -- | -- | 0.0344 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.54 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 20 |
| 15 | 69.66 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 22 |
| 18 | 69.69 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 21 |
| 48 | 69.82 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 62 | 69.85 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 15 |
| 80 | 69.88 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 23 |
| 124 | 70.01 | temperature | 20 | 4320 | > th | dose dependent | sin | 15 | NA |
| 125 | 70.01 | temperature | 20 | 4320 | > th | dose dependent | sin | 6 | NA |
| 298 | 70.93 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 302 | 70.95 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 5 |
| 318 | 71.06 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 325 | 71.10 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 397 | 71.55 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 443 | 72.01 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 19 |
| 464 | 72.24 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 2 |
| 466 | 72.26 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 19 |
| 562 | 72.97 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 23 |
| 565 | 72.98 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 23 |
| 568 | 72.99 | temperature | 25 | 4320 | > th | dose independent | rect. | 12 | 23 |
| 584 | 73.03 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 23 |
| 586 | 73.04 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 22 |
| 594 | 73.08 | temperature | 25 | 4320 | > th | dose independent | no | NA | NA |
| 607 | 73.12 | temperature | 25 | 4320 | < th | dose independent | rect. | 12 | 23 |
| 633 | 73.19 | temperature | 25 | 4320 | < th | dose independent | no | NA | NA |
| 647 | 73.22 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 23 |
| 690 | 73.32 | temperature | 25 | 4320 | > th | dose independent | sin | 5 | NA |
| 756 | 73.43 | temperature | 25 | 4320 | < th | dose independent | sin | 4 | NA |
| 807 | 73.50 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 2 |