Os08g0374800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to UDP-galactose 4-epimerase-like protein.
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Os08g0374800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to UDP-galactose 4-epimerase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.15 | 0.405 | 11.5 | -0.345 | 2.67 | -0.143 | -0.768 | 6.09 | -0.398 | 6.38 | 31.2 | 1107 | -- | -- |
| 75.82 | 0.406 | 11.7 | -1.33 | 2.69 | 0.552 | -0.444 | -- | -0.421 | 6.35 | 30.49 | 1117 | -- | -- |
| 75.59 | 0.405 | 11.5 | -0.349 | 2.67 | -0.154 | -- | 6.19 | -0.398 | 6.39 | 31.2 | 1084 | -- | -- |
| 76.8 | 0.408 | 11.6 | -1.29 | 2.67 | 0.54 | -- | -- | -0.393 | 6.38 | 30.9 | 1116 | -- | -- |
| 439.93 | 0.977 | 11.5 | 0.0546 | -- | -0.127 | -- | 7.05 | -0.227 | -- | 29.03 | 1320 | -- | -- |
| 88.93 | 0.442 | 11.7 | -1.16 | 2.69 | -- | -0.722 | -- | -0.495 | 6.27 | -- | -- | -- | -- |
| 90.22 | 0.445 | 11.7 | -1.17 | 2.69 | -- | -- | -- | -0.492 | 6.26 | -- | -- | -- | -- |
| 426.4 | 0.966 | 11.7 | -0.926 | -- | -1.33 | -- | -- | -0.388 | -- | 25.93 | 1304 | -- | -- |
| 119.37 | 0.509 | 11.6 | -- | 2.66 | 0.381 | -- | -- | -0.299 | 6.37 | 33.11 | 1019 | -- | -- |
| 465.16 | 1.01 | 11.7 | -1.09 | -- | -- | -- | -- | -0.434 | -- | -- | -- | -- | -- |
| 126.11 | 0.525 | 11.6 | -- | 2.67 | -- | -- | -- | -0.362 | 6.29 | -- | -- | -- | -- |
| 448.59 | 0.99 | 11.7 | -- | -- | -1.47 | -- | -- | -0.283 | -- | 25.93 | 1304 | -- | -- |
| 496.75 | 1.04 | 11.7 | -- | -- | -- | -- | -- | -0.312 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.42 | wind | 3.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 2 | 72.49 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 11 | 72.72 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 12 | 72.78 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 44 | 73.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 14 |
| 45 | 73.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 46 | 73.89 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 50 | 73.93 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 54 | 74.08 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 56 | 74.10 | wind | 3.0 | 270 | < th | dose independent | rect. | 2 | 2 |
| 70 | 74.14 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 2 | 10 |
| 78 | 74.25 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 12 | 14 |
| 81 | 74.30 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 82 | 74.30 | temperature | 25.0 | 720 | > th | dose dependent | sin | 13 | NA |
| 87 | 74.36 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 89 | 74.37 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 92 | 74.44 | wind | 3.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 100 | 74.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 10 |
| 101 | 74.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 10 |
| 105 | 74.60 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 106 | 74.60 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 3 | 10 |
| 107 | 74.62 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 2 | 10 |
| 109 | 74.64 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 6 |
| 113 | 74.67 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 115 | 74.69 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 119 | 74.70 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 121 | 74.70 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 125 | 74.73 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 3 | 9 |
| 131 | 74.77 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 136 | 74.82 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 181 | 74.92 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 182 | 74.93 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 9 |
| 187 | 74.99 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 7 |
| 200 | 75.08 | wind | 3.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 202 | 75.09 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 209 | 75.12 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 13 |
| 216 | 75.15 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 2 |
| 230 | 75.17 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 241 | 75.26 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 244 | 75.26 | temperature | 15.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 250 | 75.28 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 14 | 5 |
| 285 | 75.31 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 291 | 75.34 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 292 | 75.34 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 293 | 75.35 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 318 | 75.39 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 3 |
| 319 | 75.39 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 320 | 75.39 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 351 | 75.45 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 359 | 75.47 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 389 | 75.51 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 407 | 75.56 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 424 | 75.57 | humidity | 80.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 426 | 75.58 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 3 |
| 429 | 75.58 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 434 | 75.59 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 435 | 75.60 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 453 | 75.61 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 7 |
| 455 | 75.61 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 10 |
| 483 | 75.65 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 485 | 75.66 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 487 | 75.66 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 503 | 75.70 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 506 | 75.70 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 509 | 75.70 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 510 | 75.70 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 512 | 75.70 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 519 | 75.71 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 545 | 75.73 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 565 | 75.78 | temperature | 25.0 | 30 | < th | dose independent | rect. | 13 | 13 |
| 567 | 75.78 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 613 | 75.84 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 615 | 75.84 | temperature | 30.0 | 1440 | > th | dose dependent | no | NA | NA |
| 710 | 75.85 | humidity | 80.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 724 | 75.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 726 | 75.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 732 | 75.88 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 787 | 75.91 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 817 | 75.93 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 821 | 75.93 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 11 | 14 |
| 823 | 75.93 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 824 | 75.94 | temperature | 30.0 | 1440 | > th | dose independent | sin | 13 | NA |
| 839 | 75.96 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 3 | 7 |
| 840 | 75.97 | temperature | 30.0 | 1440 | < th | dose independent | sin | 12 | NA |
| 848 | 75.98 | wind | 5.0 | 43200 | < th | dose independent | rect. | 24 | 15 |
| 850 | 75.98 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 854 | 76.00 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 861 | 76.01 | wind | 1.0 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 877 | 76.03 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 880 | 76.04 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 11 |
| 910 | 76.08 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 911 | 76.08 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 921 | 76.10 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 923 | 76.10 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 924 | 76.10 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 927 | 76.10 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 928 | 76.10 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 934 | 76.10 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 939 | 76.11 | wind | 5.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 941 | 76.11 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 942 | 76.11 | wind | 5.0 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 947 | 76.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 949 | 76.12 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 950 | 76.12 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 953 | 76.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 954 | 76.12 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 956 | 76.12 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 986 | 76.13 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 988 | 76.13 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 13 |
| 998 | 76.14 | wind | 5.0 | 43200 | < th | dose independent | sin | 5 | NA |