BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0374800 Os08g0374800|AK066269
(408 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0374800 Similar to UDP-galactose 4-epimerase-like protein 843 0.0
Os09g0323000 Similar to UDP-galactose 4-epimerase-like protein 639 0.0
Os05g0595100 Similar to UDPglucose 4-epimerase-like protein 569 e-162
Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2... 460 e-130
AK110765 291 8e-79
Os07g0139400 UDP-glucose 4-epimerase family protein 270 2e-72
Os08g0129700 UDP-glucose 4-epimerase family protein 268 4e-72
Os04g0618200 UDP-glucose 4-epimerase family protein 267 1e-71
Os08g0526100 NAD-dependent epimerase/dehydratase family pro... 99 6e-21
Os09g0504000 Similar to Nucleotide sugar epimerase-like pro... 89 4e-18
Os03g0249500 Similar to Nucleotide sugar epimerase-like pro... 88 1e-17
Os03g0278200 NAD-dependent epimerase/dehydratase family pro... 86 5e-17
Os03g0280800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35) 86 6e-17
Os07g0674100 UDP-glucuronic acid decarboxylase 79 9e-15
Os01g0315800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35) 78 2e-14
Os01g0837300 UDP-glucuronic acid decarboxylase 76 5e-14
Os02g0791500 Similar to Nucleotide sugar epimerase-like pro... 75 1e-13
>Os08g0374800 Similar to UDP-galactose 4-epimerase-like protein
Length = 408
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/408 (100%), Positives = 408/408 (100%)
Query: 1 MAVEKTVPGGVRTVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAG 60
MAVEKTVPGGVRTVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAG
Sbjct: 1 MAVEKTVPGGVRTVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAG 60
Query: 61 DHSRNLAFHKVDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVN 120
DHSRNLAFHKVDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVN
Sbjct: 61 DHSRNLAFHKVDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVN 120
Query: 121 LLEVMSAHGCKKLVFSSSAAVYGSPKNSPCTEEFPLTPNNPYGKTKLVVEDICRDIYRTD 180
LLEVMSAHGCKKLVFSSSAAVYGSPKNSPCTEEFPLTPNNPYGKTKLVVEDICRDIYRTD
Sbjct: 121 LLEVMSAHGCKKLVFSSSAAVYGSPKNSPCTEEFPLTPNNPYGKTKLVVEDICRDIYRTD 180
Query: 181 PEWKIILLRYFNPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTILGNDYATRDG 240
PEWKIILLRYFNPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTILGNDYATRDG
Sbjct: 181 PEWKIILLRYFNPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTILGNDYATRDG 240
Query: 241 TGVRDYIHVVDLADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKIP 300
TGVRDYIHVVDLADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKIP
Sbjct: 241 TGVRDYIHVVDLADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKIP 300
Query: 301 LIIGPRRPGDAEILFSLPAKAEKELNWKAKFGIDEMCRDQWNWASKNPYGYGSLDSTKQN 360
LIIGPRRPGDAEILFSLPAKAEKELNWKAKFGIDEMCRDQWNWASKNPYGYGSLDSTKQN
Sbjct: 301 LIIGPRRPGDAEILFSLPAKAEKELNWKAKFGIDEMCRDQWNWASKNPYGYGSLDSTKQN 360
Query: 361 GHHSYGSIGSPKQNGHCTNGFSESTRHNGHNGYGLVDSAKHNGNGHFH 408
GHHSYGSIGSPKQNGHCTNGFSESTRHNGHNGYGLVDSAKHNGNGHFH
Sbjct: 361 GHHSYGSIGSPKQNGHCTNGFSESTRHNGHNGYGLVDSAKHNGNGHFH 408
>Os09g0323000 Similar to UDP-galactose 4-epimerase-like protein
Length = 369
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/351 (86%), Positives = 327/351 (93%), Gaps = 1/351 (0%)
Query: 12 RTVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAGDHSRNLAFHKV 71
RTVLVTGGAGYIGSH VLQLL AGFR VV D+L NSSELAVRRVAALAGD +RNL+ HKV
Sbjct: 18 RTVLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDKARNLSLHKV 77
Query: 72 DLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMSAHGCK 131
D+RDKG LEKVF+STRFDAVVHFAGLKAVGESVQKPLLYYD+NV GT+ LLEVM+AHGCK
Sbjct: 78 DIRDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCK 137
Query: 132 KLVFSSSAAVYGSPKNSPCTEEFPLTPNNPYGKTKLVVEDICRDIYRTDPEWKIILLRYF 191
KLVFSSSAAVYGSPKNSPCTEEFPLTP+NPYG+TKL+ E+ICRDIY +D EW IILLRYF
Sbjct: 138 KLVFSSSAAVYGSPKNSPCTEEFPLTPHNPYGRTKLIAEEICRDIYHSDSEWSIILLRYF 197
Query: 192 NPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTILGNDYATRDGTGVRDYIHVVD 251
NPVGAHPSGYLGEDPCGIPNNLMP+VQQVAVGRRP+LTI GNDYAT+DGTGVRDYIHVVD
Sbjct: 198 NPVGAHPSGYLGEDPCGIPNNLMPFVQQVAVGRRPSLTIFGNDYATKDGTGVRDYIHVVD 257
Query: 252 LADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKIPLIIGPRRPGDA 311
LA+GHIAAL+KLFE SSIGC+AYNLGTGKGTSVLEIV AFEK SGKKIPL+IGPRRPGDA
Sbjct: 258 LAEGHIAALRKLFE-SSIGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIGPRRPGDA 316
Query: 312 EILFSLPAKAEKELNWKAKFGIDEMCRDQWNWASKNPYGYGSLDSTKQNGH 362
EILFS AKAE+E WKAK+GI+EMCRDQWNWASKNP+GY S DSTKQNGH
Sbjct: 317 EILFSSAAKAEREFKWKAKYGIEEMCRDQWNWASKNPFGYASPDSTKQNGH 367
>Os05g0595100 Similar to UDPglucose 4-epimerase-like protein
Length = 354
Score = 569 bits (1467), Expect = e-162, Method: Compositional matrix adjust.
Identities = 267/348 (76%), Positives = 306/348 (87%), Gaps = 1/348 (0%)
Query: 11 VRTVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAGDHSRNLAFHK 70
+RT+LVTGGAGYIGSH VLQLL GFR VV+DNL+N+SELA+ RV LAG ++ NL F K
Sbjct: 6 LRTILVTGGAGYIGSHTVLQLLQLGFRVVVLDNLDNASELAILRVRELAGHNANNLDFRK 65
Query: 71 VDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMSAHGC 130
VDLRDK AL+++F+S RF+AV+HFAGLKAVGESVQKPLLYYDNN+ GT+ LL+VM+AHGC
Sbjct: 66 VDLRDKQALDQIFSSQRFEAVIHFAGLKAVGESVQKPLLYYDNNLIGTITLLQVMAAHGC 125
Query: 131 KKLVFSSSAAVYGSPKNSPCTEEFPLTPNNPYGKTKLVVEDICRDIYRTDPEWKIILLRY 190
KLVFSSSA VYG PK PCTEE PL NPYG+TKLV+ED+CRD++ +DP WKIILLRY
Sbjct: 126 TKLVFSSSATVYGWPKEVPCTEESPLCAMNPYGRTKLVIEDMCRDLHASDPNWKIILLRY 185
Query: 191 FNPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTILGNDYATRDGTGVRDYIHVV 250
FNPVGAHPSGY+GEDPCGIPNNLMP+VQQVAVGRRPALT+ G DY T+DGTGVRDYIHVV
Sbjct: 186 FNPVGAHPSGYIGEDPCGIPNNLMPFVQQVAVGRRPALTVYGTDYNTKDGTGVRDYIHVV 245
Query: 251 DLADGHIAALQKLFESSS-IGCEAYNLGTGKGTSVLEIVKAFEKASGKKIPLIIGPRRPG 309
DLADGHIAAL+KL+E S IGCE YNLGTGKGTSVLE+V AFEKASGKKIPL+ RRPG
Sbjct: 246 DLADGHIAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPG 305
Query: 310 DAEILFSLPAKAEKELNWKAKFGIDEMCRDQWNWASKNPYGYGSLDST 357
DAEI+++ AKAEKEL WKAK+G++EMCRD WNWASKNPYGYGS DS+
Sbjct: 306 DAEIVYAQTAKAEKELKWKAKYGVEEMCRDLWNWASKNPYGYGSPDSS 353
>Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)
(UDP-galactose 4-epimerase)
Length = 373
Score = 460 bits (1183), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/342 (64%), Positives = 266/342 (77%), Gaps = 1/342 (0%)
Query: 13 TVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAGDH-SRNLAFHKV 71
+VLVTGGAGYIG+H VL+LL GF VVDN +NS A+ RV +AG S L F
Sbjct: 27 SVLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSARLDFIAG 86
Query: 72 DLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMSAHGCK 131
DL+ K +EKVFA+ R+DAV+HFAGLKAVGESV P +YY+NNV GT+NL M+ +GCK
Sbjct: 87 DLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAMTKYGCK 146
Query: 132 KLVFSSSAAVYGSPKNSPCTEEFPLTPNNPYGKTKLVVEDICRDIYRTDPEWKIILLRYF 191
K+VFSSSA VYG P+ +PC E+ L+ NPYG TKLV+E+ R + DPE ++ILLRYF
Sbjct: 147 KIVFSSSATVYGQPEKTPCVEDSKLSALNPYGTTKLVLENYFRQVQAADPEMRVILLRYF 206
Query: 192 NPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTILGNDYATRDGTGVRDYIHVVD 251
NP+GAH SG +GEDP GIPNNL+PY+QQVAVGRRP L + G DY TRDGT +RDYIHVVD
Sbjct: 207 NPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRRPELNVYGVDYPTRDGTAIRDYIHVVD 266
Query: 252 LADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKIPLIIGPRRPGDA 311
LADGHIAAL+KLF + IGC AYNLGTG GT+VLE+VKAFE+ASGKKIP+ I PRRPGD
Sbjct: 267 LADGHIAALEKLFATPDIGCVAYNLGTGCGTTVLEVVKAFEEASGKKIPIKICPRRPGDC 326
Query: 312 EILFSLPAKAEKELNWKAKFGIDEMCRDQWNWASKNPYGYGS 353
+++ KA+KEL W A+FGI++MCRDQWNWA KNPYGY +
Sbjct: 327 TEVYASTDKAKKELGWSARFGIEDMCRDQWNWAKKNPYGYSA 368
>AK110765
Length = 375
Score = 291 bits (744), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 168/374 (44%), Positives = 217/374 (58%), Gaps = 27/374 (7%)
Query: 7 VPGGVRTVLVTGGAGYIGSH-AVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAGDH--- 62
+P +L+ GGAGYIGSH A++ LL +R V+DN +N+ A +R+ +A D
Sbjct: 1 MPSSKPRILIPGGAGYIGSHVALVTLLTRKYRVTVLDNYHNAFPAACKRLEQIAIDELPA 60
Query: 63 --------SRNLAFHKVDLRDKGALEKVFASTRFD----AVVHFAGLKAVGESVQKPLLY 110
+ K DLR K + KVF + + D V+ A LKAVGES + P+ Y
Sbjct: 61 GASQQDKDDCKVDVFKGDLRSKDDIRKVFDAYKGDDKIWGVILCAALKAVGESSEIPIDY 120
Query: 111 YDNNVNGTVNLLEVMSAHGCKKLVFSSSAAVYGSPKNSPCTEEFPLTPNNPYGKTKLVVE 170
YD NV G VNLL+VM +GC +LV+SSSA VYG+P P E L P + YG+TK + E
Sbjct: 121 YDVNVGGLVNLLKVMHDNGCNRLVYSSSATVYGTPPKVPIPESTRLAPESVYGRTKWMSE 180
Query: 171 DICRDIYRTDPEWKIILLRYFNPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVG--RRPAL 228
I RD+ PE++ I LRYFNP GAH SG +GEDP G P NL+P + Q+AVG R L
Sbjct: 181 IIIRDVCDAYPEFRAIGLRYFNPAGAHKSGKIGEDPRGKPGNLLPLLAQMAVGKYREGGL 240
Query: 229 TILGNDYATRDGTGVRDYIHVVDLADGHIAALQKLFESSSIGCE---------AYNLGTG 279
+ GNDY T DGT VRDYIH+ DLA GH+ A++ L + A+NLG G
Sbjct: 241 KVFGNDYPTPDGTCVRDYIHIEDLAGGHVNAVEALERDDIFAADKTETHGKYRAFNLGKG 300
Query: 280 KGTSVLEIVKAFEKASGKKIPLIIGPRRPGDAEILFSLPAKAEKELNWKAKFGIDEMCRD 339
G SVL +V A K SG + P I RR GD L + P+ AEKEL +KA +D+M +D
Sbjct: 301 VGMSVLNMVDAMRKVSGYEFPHTIVDRRTGDVPDLTADPSLAEKELGFKATRSLDDMAQD 360
Query: 340 QWNWASKNPYGYGS 353
W W S NP GYG
Sbjct: 361 LWRWQSNNPQGYGE 374
>Os07g0139400 UDP-glucose 4-epimerase family protein
Length = 421
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 207/355 (58%), Gaps = 23/355 (6%)
Query: 10 GVRTVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAGDHSRNLAFH 69
GV VLVTGGAGYIGSHA L+LL FR +VDNL+ + A++ + L + R L F
Sbjct: 71 GVTHVLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLFSEPGR-LQFI 129
Query: 70 KVDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMSAHG 129
DL D A+ ++FA FDAV+HFA + VGES +PL YY N + T+ +LE M+AH
Sbjct: 130 YADLGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAMAAHN 189
Query: 130 CKKLVFSSSAAVYGSPKNSPCTEEFPLTPNNPYGKTKLVVEDICRDIYRT-DPEWKIILL 188
+ L++SS+ A YG P+ P TE P P NPYGK K + EDI D ++ + +++L
Sbjct: 190 VRTLIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSKKADMAVMIL 249
Query: 189 RYFNPVGAHPSGYLGEDPCGIPNNLMPYVQQ----------VAVGRRPALTILGNDYATR 238
RYFN +G+ P G LGE P P +++ A+G P L + G DY T
Sbjct: 250 RYFNVIGSDPEGRLGEAP-------KPELREHGRISGACFDAALGIIPGLKVKGTDYETP 302
Query: 239 DGTGVRDYIHVVDLADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKK 298
DGT VRDYI V DL D H+ AL K E +G YN+GTGKG SV E V+A +KA+G
Sbjct: 303 DGTCVRDYIDVTDLVDAHVKALNKA-ERGKVGI--YNVGTGKGRSVKEFVEACKKATGVD 359
Query: 299 IPLIIGPRRPGDAEILFSLPAKAEKELNWKAKF-GIDEMCRDQWNWASKNPYGYG 352
I + PRRPGD ++S PAK ELNW A+ + E R W W K+ GYG
Sbjct: 360 IKVDYFPRRPGDYAEVYSDPAKINSELNWTAQHTDLLESLRVAWTWQKKHRSGYG 414
>Os08g0129700 UDP-glucose 4-epimerase family protein
Length = 406
Score = 268 bits (686), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 203/355 (57%), Gaps = 22/355 (6%)
Query: 10 GVRTVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAGDHSRNLAFH 69
GV VLVTGGAGYIGSHA L+LL +R +VDNL+ + AV+ + L R L F
Sbjct: 62 GVTHVLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQPGR-LQFI 120
Query: 70 KVDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMSAHG 129
DL D+ + K+FA FDAV+HFA + VGES +PL YY N + T+ +LE M++HG
Sbjct: 121 YADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHG 180
Query: 130 CKKLVFSSSAAVYGSPKNSPCTEEFPLTPNNPYGKTKLVVEDICRDIYRTDPEWKIILLR 189
K L++SS+ A YG P+ P E P NPYGK K + EDI D + + +++LR
Sbjct: 181 VKTLIYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKDMAVMILR 240
Query: 190 YFNPVGAHPSGYLGEDPCGIPNNLMPYVQQ----------VAVGRRPALTILGNDYATRD 239
YFN +G+ P G LGE P P +++ A+G P L + G DY T D
Sbjct: 241 YFNVIGSDPEGRLGEAP-------RPELREHGRISGACFDAALGIIPGLKVKGTDYPTTD 293
Query: 240 GTGVRDYIHVVDLADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKI 299
GT +RDYI V DL D H+ AL K E S +G YN+GTG+G SV E V A +KA+G I
Sbjct: 294 GTCIRDYIDVTDLVDAHVKALNKA-EPSKVGI--YNVGTGRGRSVKEFVDACKKATGVNI 350
Query: 300 PLIIGPRRPGDAEILFSLPAKAEKELNWKAKF-GIDEMCRDQWNWASKNPYGYGS 353
+ RRPGD ++S P K ELNW A++ + E W W +P GYGS
Sbjct: 351 KIEYLSRRPGDYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSHPRGYGS 405
>Os04g0618200 UDP-glucose 4-epimerase family protein
Length = 428
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 203/355 (57%), Gaps = 23/355 (6%)
Query: 10 GVRTVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAGDHSRNLAFH 69
GV VLVTGGAGYIGSHA L+LL +R +VDNL+ + AVR + L + R L F
Sbjct: 85 GVTHVLVTGGAGYIGSHATLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPEPGR-LQFI 143
Query: 70 KVDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMSAHG 129
DL D A+ K+F+ FDAV+HFA + VGES +PL YY N + T+ +LE M+A+
Sbjct: 144 YADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYN 203
Query: 130 CKKLVFSSSAAVYGSPKNSPCTEEFPLTPNNPYGKTKLVVEDICRDIYRTDPEWKIILLR 189
K L++SS+ A YG P P TE P P NPYGK K + EDI D + E +++LR
Sbjct: 204 VKTLIYSSTCATYGEPDTMPITEATPQNPINPYGKAKKMAEDIILDFSKRS-EMAVMILR 262
Query: 190 YFNPVGAHPSGYLGEDPCGIPNNLMPYVQQ----------VAVGRRPALTILGNDYATRD 239
YFN +G+ P G LGE P P +++ A+G P L + G DY T D
Sbjct: 263 YFNVIGSDPGGRLGEAP-------RPELREHGRISGACFDAALGIIPGLKVRGTDYPTAD 315
Query: 240 GTGVRDYIHVVDLADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKI 299
GT +RDYI V DL D H+ AL K + +G YN+GTG G SV E V+A + A+G I
Sbjct: 316 GTCIRDYIDVTDLVDAHVKALDKA-QPGKVGI--YNVGTGHGRSVKEFVEACKSATGASI 372
Query: 300 PLIIGPRRPGDAEILFSLPAKAEKELNWKAKF-GIDEMCRDQWNWASKNPYGYGS 353
+ RRPGD ++S P+K ELNW A++ + E W W +P GYGS
Sbjct: 373 KVSFLTRRPGDYAEVYSDPSKIHDELNWTARYIDLRESLSTAWKWQKAHPNGYGS 427
>Os08g0526100 NAD-dependent epimerase/dehydratase family protein
Length = 478
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 152/348 (43%), Gaps = 37/348 (10%)
Query: 13 TVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAA--LAGDHSRNLAFHK 70
+VLVTG AG++G+H L L G V +DN N+ + +++R LA SR +A
Sbjct: 125 SVLVTGAAGFVGAHCSLALRARGDGVVGLDNFNSYYDPSLKRARQRLLA---SRGVAVLD 181
Query: 71 VDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMSAHGC 130
D+ D LE++F + RF V+H A V +++ P Y +NV G V++ EV + H
Sbjct: 182 ADINDAALLERLFDAARFTHVLHLAAQAGVRYAMRAPQTYVASNVAGLVSVFEVAAKHAD 241
Query: 131 KK--LVFSSSAAVYGSPKNSPCTEEFPL-TPNNPYGKTKLVVEDICRDIYRTDPEWKIIL 187
+ +V++SS++VYG ++P +EE P + Y TK E I Y I
Sbjct: 242 PQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAH-AYNHIYGLSITG 300
Query: 188 LRYFNPVGAHPSGYLGEDPCGIPN-NLMPYVQQVAVGRRPALTILGNDYATRDGTGV-RD 245
LR+F G P G P+ + + + G L + T DG RD
Sbjct: 301 LRFFTVYG----------PWGRPDMAYFSFARSIVAGEPITL------FRTADGADARRD 344
Query: 246 YIHVVDLADGHIAALQKLFESSSIGC---------EAYNLGTGKGTSVLEIVKAFEKASG 296
+ ++ D+ G + AL ES+ YNLG V +V EK G
Sbjct: 345 FTYIDDVVKGCLGALDTAGESTGTKSGKKRGPAPLRVYNLGNTSPVPVTRMVAILEKLLG 404
Query: 297 KKI-PLIIGPRRPGDAEILFSLPAKAEKELNWKAKFGIDEMCRDQWNW 343
+K ++ GD + + A ++ ++ +D R +W
Sbjct: 405 RKANKRVVTMPSNGDVPFTHANVSHAARDFGYRPATPLDAGLRRFVDW 452
>Os09g0504000 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 498
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 143/351 (40%), Gaps = 35/351 (9%)
Query: 9 GGVRTVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNN--SSELAVRRVAALAGDHSRNL 66
GG+ VLVTG AG++G+H L L G + +DN N EL R LAG R +
Sbjct: 124 GGI-AVLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKRARQRLLAG---RGV 179
Query: 67 AFHKVDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMS 126
D+ D LEK+F F V+H A V +++ P Y +NV G V +LEV +
Sbjct: 180 LVLDADINDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNVAGLVTVLEVAA 239
Query: 127 AHGCKK--LVFSSSAAVYGSPKNSPCTEEFPL-TPNNPYGKTKLVVEDICRDIYRTDPEW 183
H + +V++SS++VYG ++P +EE P + Y TK E I Y
Sbjct: 240 KHADPQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAH-TYNHIYGL 298
Query: 184 KIILLRYFNPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTILGNDYATRDGTGV 243
I LR+F G P G P+ + + V P D A
Sbjct: 299 SITGLRFFTVYG----------PWGRPDMAYFFFAKSIVSGEPITLFRAADGA----DAR 344
Query: 244 RDYIHVVDLADGHIAALQKLFESSSIG----------CEAYNLGTGKGTSVLEIVKAFEK 293
RD+ ++ D+ G + AL +S+ YNLG V +V EK
Sbjct: 345 RDFTYIDDVVKGCLGALDTSGKSTGSSKSGKKSGPAPLRVYNLGNTSPVPVTRMVAILEK 404
Query: 294 ASGKKI-PLIIGPRRPGDAEILFSLPAKAEKELNWKAKFGIDEMCRDQWNW 343
GKK I+ GD + A + ++ +D R +W
Sbjct: 405 LLGKKANKRIVAMPSNGDVPFTHANVTHAAHDFGYRPTTSLDAGLRHFVDW 455
>Os03g0249500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 484
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 141/342 (41%), Gaps = 23/342 (6%)
Query: 13 TVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAGDHSRNLAFHKVD 72
TVLVTG AG++G HA L G + +DN N+ + A++R A S + D
Sbjct: 120 TVLVTGAAGFVGCHAAAALRRRGDGVLGLDNFNDYYDPALKRGRAALLARS-GVYVVDGD 178
Query: 73 LRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMS-AHGCK 131
+ D L K+F F V+H A V ++ P+ Y NV G V LLE A+
Sbjct: 179 IADAELLAKLFDVVPFTHVLHLAAQAGVRHALVDPMSYVRANVGGFVALLEAARMANPQP 238
Query: 132 KLVFSSSAAVYGSPKNSPCTE-EFPLTPNNPYGKTKLVVEDICRDIYRTDPEWKIILLRY 190
+V++SS++VYG + P +E + P + Y TK E+I Y + LR+
Sbjct: 239 AIVWASSSSVYGLNSHVPFSEHDRTDRPASLYAATKKAGEEIAH-AYNHIYGLSLTALRF 297
Query: 191 FNPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTILGNDYATRDGTGVRDYIHVV 250
F G P G P+ + + + RP T T RD+ ++
Sbjct: 298 FTVYG----------PWGRPDMAYFFFTRDILAGRPITVYESAGGGTHQTTISRDFTYID 347
Query: 251 DLADGHIAALQKLFESSSIG--------CEAYNLGTGKGTSVLEIVKAFEK-ASGKKIPL 301
D+ G + AL S+ G YNLG V ++V EK K +
Sbjct: 348 DIVKGCVGALDTAGRSTGSGGKKRGPAPFRTYNLGNTSPVPVTQLVDLLEKLLKVKAVRK 407
Query: 302 IIGPRRPGDAEILFSLPAKAEKELNWKAKFGIDEMCRDQWNW 343
I+ R GD + + A++EL ++ + + W
Sbjct: 408 IVKMPRNGDVPYTHANISLAQRELGYRPSTDLQTGVKKFVRW 449
>Os03g0278200 NAD-dependent epimerase/dehydratase family protein
Length = 675
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 142/351 (40%), Gaps = 36/351 (10%)
Query: 12 RTVLVTGGAGYIGSHAVLQLL--LAGFRAVVVDNLNNSSELAVRRVAALAGDHSRNLAFH 69
+ +L+TG AG+I SH +L+ ++ VV+D L+ S L+ S N F
Sbjct: 7 KNILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCSSLSNLN----PSRPSPNFKFV 62
Query: 70 KVDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMSAHG 129
K D+ + + + D ++HFA V S + NN+ GT LLE G
Sbjct: 63 KGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
Query: 130 -CKKLVFSSSAAVYGSPKNSPCT---EEFPLTPNNPYGKTKLVVEDICRDIYRTDPEWKI 185
++ + S+ VYG E L P NPY TK E + Y +
Sbjct: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM-AYGRSYGLPV 181
Query: 186 ILLRYFNPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTILGNDYATRDGTGVRD 245
I R N G P P L+P +A+ P L I G DG+ VR
Sbjct: 182 ITTRGNNVYG----------PNQFPEKLIPKFILLAMRGLP-LPIHG------DGSNVRS 224
Query: 246 YIHVVDLADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKIPLIIG- 304
Y++ D+A+ L K +G YN+GT K V+++ K K G +I
Sbjct: 225 YLYCEDVAEAFEVVLHK----GEVG-HVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRF 279
Query: 305 -PRRPGDAEILFSLPAKAEKELNWKAKFGIDEMCRDQWNWASKNPYGYGSL 354
RP + + F L + K+L W + +E + W + NP +G +
Sbjct: 280 VENRPFNDQRYF-LDDQKLKKLGWAERTLWEEGLKKTIEWYTNNPDYWGDV 329
>Os03g0280800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35)
Length = 396
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 149/344 (43%), Gaps = 44/344 (12%)
Query: 1 MAVEKTVPGGVRT----VLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVA 56
+A + +P GVR V+VTGGAG++GSH V +LL G +VVDN + V
Sbjct: 70 VAASRRLPVGVRKPPLRVVVTGGAGFVGSHLVDELLARGDSVIVVDNFFTGRKENV---- 125
Query: 57 ALAGDHSRNLAFHKVDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVN 116
+R+LA + +L +E + D + H A + P+ NV
Sbjct: 126 ------ARHLADPRFELIRHDVVEPILLEV--DQIYHLACPASPVHYKFNPIKTIKTNVM 177
Query: 117 GTVNLLEVMSAHGCKKLVFSSSAAVYGSPKNSPCTEEF-----PLTPNNPYGKTKLVVED 171
GT+N+L + G + + +S++ VYG P P E + P+ + Y + K E
Sbjct: 178 GTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKESYWGHVNPIGVRSCYDEGKRTAET 236
Query: 172 ICRDIYRTDPEWKIILLRYFNPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTIL 231
+ D +R ++ + R FN G + D + +N +V Q R+ +T+
Sbjct: 237 LTMDYHR-GAGVEVRIARIFNTYGPR----MCLDDGRVVSN---FVAQTL--RKQPMTVY 286
Query: 232 GNDYATRDGTGVRDYIHVVDLADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAF 291
G DG R + +V DL DG I L ES IG +NLG ++LE+ +
Sbjct: 287 G------DGKQTRSFQYVSDLVDGLIT----LMESEHIG--PFNLGNPGEFTMLELAQVV 334
Query: 292 EKASGKKIPLIIGPRRPGDAEILFSLPAKAEKELNWKAKFGIDE 335
++ + P D + +KA+ L+W+ K + +
Sbjct: 335 KETIDPSARVEFKPNTADDPHMRKPDISKAKSLLHWEPKISLKQ 378
>Os07g0674100 UDP-glucuronic acid decarboxylase
Length = 445
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 147/346 (42%), Gaps = 48/346 (13%)
Query: 7 VPGGVRT----VLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAGDH 62
VP G++ V+VTGGAG++GSH V +LL G +VVDNL + V AG+
Sbjct: 117 VPLGLKKKGLRVVVTGGAGFVGSHLVDRLLARGDSVMVVDNLFTGRK---ENVLHHAGNP 173
Query: 63 SRNLAFHKVDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLL 122
+ + H V +E + D + H A + P+ NV GT+N+L
Sbjct: 174 NFEMIRHDV-------VEPILLEV--DQIYHLACPASPVHYKHNPVKTIKTNVVGTLNML 224
Query: 123 EVMSAHGCKKLVFSSSAAVYGSPKNSPCTEEF-----PLTPNNPYGKTKLVVEDICRDIY 177
+ G + + +S++ VYG P P E + P+ + Y + K E + D +
Sbjct: 225 GLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYH 283
Query: 178 RTDPEWKIILLRYFNPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTILGNDYAT 237
R ++ + R FN G + D + +N +V Q R+ LT+ G
Sbjct: 284 R-GANLEVRIARIFNTYGPR----MCIDDGRVVSN---FVAQAL--RKEPLTVYG----- 328
Query: 238 RDGTGVRDYIHVVDLADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGK 297
DG R + +V DL +G L KL E +G +NLG ++LE+ K +
Sbjct: 329 -DGKQTRSFQYVSDLVEG----LMKLMEGEHVG--PFNLGNPGEFTMLELAKVVQDTIDP 381
Query: 298 KIPLIIGPRRPGDAEILFSLPAKAEKELNWKAKF----GIDEMCRD 339
+ P D ++A++ L W+ K G+ M +D
Sbjct: 382 NARIEFRPNTADDPHKRKPDISRAKELLGWEPKIPLHKGLPLMVQD 427
>Os01g0315800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35)
Length = 425
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 141/338 (41%), Gaps = 44/338 (13%)
Query: 7 VPGGVRT----VLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAGDH 62
VP G+R VLVTGGAG++GSH V +L+ G +VVDN + V
Sbjct: 104 VPLGLRRRALRVLVTGGAGFVGSHLVDRLVERGDSVIVVDNFFTGRKDNV---------- 153
Query: 63 SRNLAFHKVDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLL 122
+ +LA + ++ +E + D + H A + P+ NV GT+N+L
Sbjct: 154 AHHLANPRFEVIRHDVVEPILLEV--DQIYHLACPASPVHYKYNPIKTIKTNVVGTLNML 211
Query: 123 EVMSAHGCKKLVFSSSAAVYGSPKNSPCTEEF-----PLTPNNPYGKTKLVVEDICRDIY 177
+ G K + +S++ VYG P P E + P+ + Y + K E + D +
Sbjct: 212 GLAKRIGA-KFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYH 270
Query: 178 RTDPEWKIILLRYFNPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTILGNDYAT 237
R ++ + R FN G + D + +N +V Q R+ LT+ G
Sbjct: 271 R-GANLEVRIARIFNTYGPR----MCIDDGRVVSN---FVAQAL--RKEPLTVYG----- 315
Query: 238 RDGTGVRDYIHVVDLADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGK 297
DG R + +V DL +G L L E IG +NLG ++LE+ K +
Sbjct: 316 -DGKQTRSFQYVSDLVEG----LMSLMEGEHIG--PFNLGNPGEFTMLELAKVVQDTIDP 368
Query: 298 KIPLIIGPRRPGDAEILFSLPAKAEKELNWKAKFGIDE 335
+ P D +A++ L W+ K + E
Sbjct: 369 NARIEFRPNTADDPHKRKPDITRAKELLGWEPKVPLRE 406
>Os01g0837300 UDP-glucuronic acid decarboxylase
Length = 410
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 136/326 (41%), Gaps = 40/326 (12%)
Query: 15 LVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAGDHSRNLAFHKVDLR 74
+VTGGAG++GSH V +LL G +VVDN + V H RN F +L
Sbjct: 104 VVTGGAGFVGSHLVDRLLEQGDSVIVVDNFFTGRKDNV-------AHHLRNPRF---ELL 153
Query: 75 DKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMSAHGCKKLV 134
+E + D + H A + P+ NV GT+N+L + G + L+
Sbjct: 154 RHDVVEPILLEV--DRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLL 211
Query: 135 FSSSAAVYGSPKNSPCTEEF-----PLTPNNPYGKTKLVVEDICRDIYRTDPEWKIILLR 189
+S++ VYG P P E + P+ + Y + K E + D +R ++ + R
Sbjct: 212 -TSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGG-GVEVRIAR 269
Query: 190 YFNPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTILGNDYATRDGTGVRDYIHV 249
FN G + D + +N +V Q RR +T+ G DG R + +V
Sbjct: 270 IFNTYGPR----MCLDDGRVVSN---FVAQAL--RRQPMTVYG------DGKQTRSFQYV 314
Query: 250 VDLADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKIPLIIGPRRPG 309
DL +A L L E IG +NLG ++LE+ + ++ + P
Sbjct: 315 SDL----VAGLMALMEGDHIG--PFNLGNPGEFTMLELAQVVKETIDPMATIEFKPNTAD 368
Query: 310 DAEILFSLPAKAEKELNWKAKFGIDE 335
D + KA+ L W+ K + E
Sbjct: 369 DPHMRKPDITKAKHLLRWEPKVSLRE 394
>Os02g0791500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 437
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 149/360 (41%), Gaps = 40/360 (11%)
Query: 9 GGVRTVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAGDHSRNLAF 68
G +VLVTG AG++G+H L L G V +DN N+ + ++++ LA
Sbjct: 94 GAGMSVLVTGAAGFVGTHCSLALRKRGDGVVGIDNFNSYYDPSLKKA------RRSLLAS 147
Query: 69 HKV-----DLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLE 123
H V D+ D L K+F F V+H A V +++ P Y +N+ G V LLE
Sbjct: 148 HGVFVIEGDINDGRLLAKLFDVVPFTHVLHLAAQAGVRYAMENPASYVHSNIAGLVTLLE 207
Query: 124 VMS-AHGCKKLVFSSSAAVYGSPKNSPCTE-EFPLTPNNPYGKTKLVVEDICRDIYRTDP 181
A +V++SS++VYG P TE + P + Y TK E+I Y
Sbjct: 208 ACKDADPQPAIVWASSSSVYGLNDKVPFTESDRTDQPASLYAATKKAGEEITH-TYNHIY 266
Query: 182 EWKIILLRYFNPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTILGNDYATRDGT 241
I LR+F G P G P+ + + +P G +
Sbjct: 267 GLSITGLRFFTVYG----------PWGRPDMAYFSFTRNILQGKPITVYRGKNRVDL--- 313
Query: 242 GVRDYIHVVDLADGHIAALQKLFESSSIGCEA--------YNLGTGKGTSVLEIVKAFEK 293
RD+ ++ D+ G + +L +S+ G + +NLG +V +V EK
Sbjct: 314 -ARDFTYIDDIVKGCLGSLDTAGKSTGTGGKKRGPAPYRIFNLGNTSPVTVPNLVSILEK 372
Query: 294 ASGKKIPLIIGPRRPGDAEILFSLP--AKAEKELNWKAKFGIDEMCRDQWNWASKNPYGY 351
K + PG+ ++ F+ + A ++L +K +D + W + YGY
Sbjct: 373 HLRVKAKKNV-VEMPGNGDVPFTHANISLARQQLGYKPTTNLDVGLKKFVKW-YLSYYGY 430
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.136 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,330,743
Number of extensions: 686325
Number of successful extensions: 1722
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 1682
Number of HSP's successfully gapped: 17
Length of query: 408
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 305
Effective length of database: 11,657,759
Effective search space: 3555616495
Effective search space used: 3555616495
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)