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Os07g0674100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronic acid decarboxylase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.7 (0.0324) R2 : 0.632
β1 : -2.39 (0.135) R2dD : 0.354 R2D : 0.0124
β2 : 1.55 (0.0808) R2dC : 0.294 R2C : 0.314
β3 : 2.11 (0.136) R2dE : 0.29 R2E : 0.00263
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.454 (0.0741) R2dN8 : 0.0494 R2N8 : -0.072
σ : 0.593
deviance : 161.92
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_____
C
peak time of C : 3.92
E
wheather : temperature
threshold : 14.97
memory length : 5513
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
144.54 0.565 12.7 -2.75 1.48 1.71 2.45 -3.02 -0.57 3.71 21.62 1396 -- --
145.78 0.562 12.7 -2.31 1.53 2.09 2.58 -- -0.383 3.74 15.62 5515 -- --
161.82 0.592 12.7 -2.65 1.48 1.72 -- -2.59 -0.541 3.94 21.96 1369 -- --
161.92 0.593 12.7 -2.39 1.55 2.11 -- -- -0.454 3.92 14.97 5513 -- --
266.4 0.76 12.7 -2.55 -- 2.12 -- -2.62 -0.441 -- 23.97 1224 -- --
229.11 0.71 12.5 -1.28 1.61 -- 2.48 -- 0.0387 3.63 -- -- -- --
247.62 0.737 12.5 -1.32 1.63 -- -- -- 0.0241 3.78 -- -- -- --
271.6 0.768 12.6 -1.86 -- 1.89 -- -- -0.238 -- 24 1217 -- --
260.75 0.752 12.6 -- 1.62 1.36 -- -- -0.0586 3.71 -11.62 1732 -- --
395.05 0.929 12.6 -1.25 -- -- -- -- 0.0676 -- -- -- -- --
293.36 0.801 12.5 -- 1.61 -- -- -- 0.171 3.79 -- -- -- --
355.27 0.878 12.6 -- -- 1.45 -- -- 0.052 -- 24.4 1213 -- --
436.23 0.975 12.5 -- -- -- -- -- 0.206 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 133.19 radiation 30 14400 > th dose independent rect. 16 16
2 133.69 radiation 40 14400 < th dose independent rect. 15 18
3 133.70 humidity 90 43200 > th dose dependent rect. 9 2
6 134.05 radiation 30 14400 > th dose independent rect. 7 1
22 134.27 humidity 90 43200 > th dose independent rect. 8 3
24 134.44 radiation 40 14400 < th dose independent rect. 23 10
26 134.48 radiation 20 14400 < th dose independent rect. 16 15
28 134.55 radiation 40 14400 < th dose independent rect. 7 2
31 134.58 radiation 40 14400 < th dose independent rect. 2 7
41 134.83 radiation 40 14400 < th dose independent rect. 17 16
44 134.90 humidity 90 43200 < th dose independent rect. 8 3
55 135.56 wind 5 43200 > th dose independent rect. 10 2
58 135.67 wind 5 43200 < th dose independent rect. 10 2
62 135.88 wind 5 43200 > th dose independent rect. 8 6
66 136.03 radiation 10 14400 < th dose dependent rect. 18 11
72 136.09 wind 5 43200 < th dose independent rect. 8 6
74 136.11 wind 5 43200 > th dose independent rect. 5 9
78 136.15 wind 5 43200 < th dose independent rect. 5 9
88 136.34 wind 7 43200 < th dose independent rect. 19 19
92 136.42 wind 7 43200 > th dose independent rect. 19 19
98 136.57 wind 5 43200 > th dose independent rect. 3 12
104 136.66 radiation 10 14400 > th dose dependent rect. 17 13
106 136.70 wind 5 43200 > th dose independent rect. 24 15
109 136.74 wind 5 43200 < th dose independent rect. 3 12
111 136.77 wind 5 43200 < th dose independent rect. 24 15
122 136.96 humidity 90 43200 > th dose independent rect. 4 9
125 136.97 wind 7 43200 < th dose independent rect. 17 21
146 137.17 wind 5 43200 > th dose dependent rect. 19 20
171 137.46 radiation 10 14400 < th dose independent rect. 17 1
173 137.46 humidity 90 43200 < th dose independent rect. 7 16
185 137.62 wind 5 43200 > th dose independent sin 4 NA
188 137.63 humidity 90 43200 < th dose independent rect. 5 18
190 137.66 radiation 1 43200 > th dose independent rect. 18 12
194 137.70 humidity 90 43200 > th dose dependent rect. 5 18
195 137.72 wind 5 43200 < th dose independent sin 4 NA
200 137.74 humidity 90 43200 > th dose dependent rect. 8 15
203 137.76 radiation 1 43200 < th dose independent rect. 18 13
209 137.80 humidity 90 43200 < th dose independent rect. 5 8
238 137.94 wind 3 43200 > th dose dependent rect. 10 3
239 137.95 wind 5 43200 < th dose independent rect. 5 1
251 138.02 atmosphere 1005 43200 < th dose independent rect. 17 1
260 138.05 radiation 10 14400 < th dose dependent rect. 18 1
267 138.08 humidity 90 43200 > th dose independent rect. 5 18
270 138.10 radiation 1 14400 < th dose independent rect. 17 18
277 138.13 humidity 90 43200 > th dose dependent rect. 5 8
295 138.17 radiation 1 14400 < th dose dependent rect. 18 17
310 138.21 wind 5 43200 > th dose dependent rect. 24 15
312 138.22 humidity 90 43200 > th dose independent sin 1 NA
313 138.22 radiation 10 14400 < th dose independent rect. 17 11
324 138.26 radiation 1 43200 > th dose independent rect. 17 2
334 138.26 radiation 40 14400 > th dose dependent rect. 7 2
368 138.31 radiation 1 43200 > th dose independent sin 13 NA
377 138.35 humidity 90 43200 < th dose independent sin 1 NA
382 138.36 radiation 10 14400 < th dose independent rect. 17 8
386 138.36 humidity 90 43200 > th dose independent rect. 8 15
405 138.40 humidity 90 43200 > th dose dependent rect. 5 11
409 138.41 radiation 1 14400 > th dose independent rect. 17 18
412 138.41 wind 5 43200 > th dose dependent rect. 3 11
413 138.42 temperature 20 43200 < th dose dependent rect. 4 1
426 138.47 humidity 90 43200 < th dose independent rect. 22 1
457 138.51 radiation 10 14400 < th dose dependent rect. 18 7
465 138.53 humidity 90 43200 > th dose dependent sin 23 NA
485 138.57 radiation 1 14400 < th dose dependent rect. 5 1
514 138.62 temperature 20 43200 > th dose independent rect. 19 1
518 138.62 wind 5 43200 > th dose dependent rect. 8 6
526 138.65 radiation 1 14400 < th dose independent sin 10 NA
535 138.67 wind 5 43200 > th dose independent rect. 5 1
543 138.69 atmosphere 1005 43200 > th dose independent rect. 17 1
564 138.74 radiation 1 43200 < th dose independent sin 12 NA
594 138.81 radiation 20 14400 > th dose dependent rect. 16 16
618 138.88 humidity 90 43200 < th dose independent rect. 20 1
622 138.89 humidity 90 43200 > th dose independent rect. 22 1
684 139.05 radiation 1 14400 < th dose dependent sin 10 NA
701 139.07 humidity 90 43200 > th dose dependent rect. 18 5
726 139.13 radiation 1 14400 > th dose independent rect. 5 6
731 139.13 radiation 1 14400 < th dose dependent rect. 2 4
735 139.14 radiation 1 14400 < th dose independent rect. 5 6
753 139.16 radiation 1 14400 < th dose dependent rect. 24 6
754 139.17 radiation 1 14400 > th dose independent rect. 5 4
755 139.17 radiation 1 14400 < th dose independent rect. 5 4
836 139.29 radiation 1 14400 > th dose dependent rect. 18 1
858 139.32 radiation 1 43200 > th dose independent rect. 6 23
860 139.32 temperature 10 43200 > th dose dependent rect. 4 1
889 139.38 radiation 1 43200 > th dose independent rect. 9 23
890 139.38 temperature 30 43200 < th dose dependent rect. 4 1
921 139.44 humidity 90 43200 < th dose independent rect. 19 4
924 139.44 radiation 1 14400 < th dose independent rect. 5 9
928 139.44 radiation 1 14400 < th dose dependent rect. 5 5
953 139.48 radiation 1 43200 > th dose independent no NA NA
957 139.48 radiation 1 43200 > th dose independent rect. 6 13
960 139.48 radiation 1 43200 > th dose independent rect. 4 15