Os01g0315800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucuronic acid decarboxylase (EC 4.1.1.35).
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Os01g0315800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucuronic acid decarboxylase (EC 4.1.1.35).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.64 | 0.233 | 11.7 | 1.33 | 0.374 | -0.733 | 0.167 | 0.617 | 0.392 | 23.6 | 25.7 | 1402 | -- | -- |
| 25.11 | 0.233 | 11.7 | 1.16 | 0.405 | -0.743 | 0.189 | -- | 0.364 | 23.6 | 25.7 | 1385 | -- | -- |
| 24.76 | 0.232 | 11.7 | 1.33 | 0.374 | -0.734 | -- | 0.651 | 0.395 | 23.5 | 25.7 | 1401 | -- | -- |
| 25.19 | 0.234 | 11.7 | 1.14 | 0.391 | -0.687 | -- | -- | 0.342 | 23.5 | 25.8 | 1396 | -- | -- |
| 32.82 | 0.267 | 11.7 | 1.33 | -- | -0.71 | -- | 0.65 | 0.385 | -- | 25.7 | 1505 | -- | -- |
| 39.54 | 0.295 | 11.8 | 0.907 | 0.329 | -- | 0.147 | -- | 0.0999 | 23 | -- | -- | -- | -- |
| 39.63 | 0.295 | 11.8 | 0.901 | 0.329 | -- | -- | -- | 0.0995 | 23 | -- | -- | -- | -- |
| 33.12 | 0.268 | 11.7 | 1.14 | -- | -0.664 | -- | -- | 0.322 | -- | 25.8 | 1516 | -- | -- |
| 55.76 | 0.348 | 11.8 | -- | 0.376 | -0.408 | -- | -- | 0.134 | 23.8 | 25.4 | 1369 | -- | -- |
| 46.36 | 0.318 | 11.8 | 0.909 | -- | -- | -- | -- | 0.102 | -- | -- | -- | -- | -- |
| 61.04 | 0.365 | 11.8 | -- | 0.337 | -- | -- | -- | -0.000881 | 23.2 | -- | -- | -- | -- |
| 63.11 | 0.371 | 11.8 | -- | -- | -0.228 | -- | -- | 0.0978 | -- | 25.5 | 1499 | -- | -- |
| 68.14 | 0.385 | 11.8 | -- | -- | -- | -- | -- | 0.00114 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.52 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 7 |
| 2 | 24.52 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 11 | 9 |
| 34 | 24.80 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 20 | NA |
| 128 | 25.13 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 167 | 25.20 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 191 | 25.24 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 256 | 25.32 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 4 |
| 265 | 25.33 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 18 | 2 |
| 303 | 25.37 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 337 | 25.40 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 349 | 25.41 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 11 | 11 |
| 350 | 25.41 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 3 | 19 |
| 368 | 25.43 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 8 | 14 |
| 377 | 25.44 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 471 | 25.51 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 6 | 16 |
| 484 | 25.52 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 14 | 8 |
| 512 | 25.54 | temperature | 25.0 | 1440 | > th | dose independent | sin | 19 | NA |
| 583 | 25.59 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 20 |
| 590 | 25.60 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 628 | 25.61 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 18 |
| 655 | 25.63 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 662 | 25.64 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 713 | 25.67 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 15 | 5 |
| 741 | 25.69 | temperature | 25.0 | 14400 | < th | dose independent | sin | 17 | NA |
| 748 | 25.69 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 13 | 8 |
| 805 | 25.72 | temperature | 20.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 856 | 25.73 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 10 | 11 |
| 870 | 25.74 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 871 | 25.74 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 880 | 25.74 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 892 | 25.74 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 17 | 11 |
| 974 | 25.77 | temperature | 25.0 | 14400 | > th | dose independent | sin | 17 | NA |