BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0315800 Os01g0315800|AK101168
(425 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0315800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35) 660 0.0
Os05g0363200 UDP-glucuronic acid decarboxylase 604 e-173
Os07g0674100 UDP-glucuronic acid decarboxylase 596 e-170
Os01g0837300 UDP-glucuronic acid decarboxylase 565 e-161
Os03g0280800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35) 555 e-158
Os03g0278000 UDP-glucuronic acid decarboxylase 455 e-128
AK103728 396 e-110
Os01g0969100 NAD-dependent epimerase/dehydratase family pro... 105 7e-23
Os10g0417600 NAD-dependent epimerase/dehydratase family pro... 99 8e-21
AK109046 98 1e-20
Os11g0591100 NAD-dependent epimerase/dehydratase family pro... 96 4e-20
Os03g0278200 NAD-dependent epimerase/dehydratase family pro... 95 9e-20
Os02g0791500 Similar to Nucleotide sugar epimerase-like pro... 85 8e-17
Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2... 85 1e-16
Os08g0526100 NAD-dependent epimerase/dehydratase family pro... 81 1e-15
Os03g0249500 Similar to Nucleotide sugar epimerase-like pro... 80 2e-15
Os09g0504000 Similar to Nucleotide sugar epimerase-like pro... 74 2e-13
>Os01g0315800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35)
Length = 425
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/425 (77%), Positives = 330/425 (77%)
Query: 1 MASELTYRXXXXXXXXXXXXXEYSPKPSKPLSWLTXXXXXXXXXXXXXXXXXXXXXXXXX 60
MASELTYR EYSPKPSKPLSWLT
Sbjct: 1 MASELTYRGGAGAPGSASDGGEYSPKPSKPLSWLTRAARYAAAEHRPAFALAGMLLAAAL 60
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKXXXXXXXXXXXXXXXXX 120
GGK
Sbjct: 61 FSLYAPSSDASSSAATTTTTTFSHLSSLPSSSAASLHESAGGKVPLGLRRRALRVLVTGG 120
Query: 121 AGFVGSHLVDRLVERGDSVIVVDNFFTGRKDNVAHHLANPRFEVIRHDVVEPILLEVDQI 180
AGFVGSHLVDRLVERGDSVIVVDNFFTGRKDNVAHHLANPRFEVIRHDVVEPILLEVDQI
Sbjct: 121 AGFVGSHLVDRLVERGDSVIVVDNFFTGRKDNVAHHLANPRFEVIRHDVVEPILLEVDQI 180
Query: 181 YHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIGAKFLLTSTSEVYGDPLQHPQVE 240
YHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIGAKFLLTSTSEVYGDPLQHPQVE
Sbjct: 181 YHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIGAKFLLTSTSEVYGDPLQHPQVE 240
Query: 241 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSN 300
TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSN
Sbjct: 241 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSN 300
Query: 301 FVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMSLMEGEHIGPFNLGNPGEFTMLELAK 360
FVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMSLMEGEHIGPFNLGNPGEFTMLELAK
Sbjct: 301 FVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMSLMEGEHIGPFNLGNPGEFTMLELAK 360
Query: 361 VVQDTIDPNARIEFRPNTADDPHKRKPDITRAKELLGWEPKVPLREGLPLMVTDFRKRIF 420
VVQDTIDPNARIEFRPNTADDPHKRKPDITRAKELLGWEPKVPLREGLPLMVTDFRKRIF
Sbjct: 361 VVQDTIDPNARIEFRPNTADDPHKRKPDITRAKELLGWEPKVPLREGLPLMVTDFRKRIF 420
Query: 421 GDQEA 425
GDQEA
Sbjct: 421 GDQEA 425
>Os05g0363200 UDP-glucuronic acid decarboxylase
Length = 447
Score = 604 bits (1557), Expect = e-173, Method: Compositional matrix adjust.
Identities = 285/305 (93%), Positives = 295/305 (96%)
Query: 121 AGFVGSHLVDRLVERGDSVIVVDNFFTGRKDNVAHHLANPRFEVIRHDVVEPILLEVDQI 180
AGFVGSHLVDRLVERGDSVIVVDN FTGRK+NV HH NP FE+IRHDVVEPILLEVDQI
Sbjct: 133 AGFVGSHLVDRLVERGDSVIVVDNLFTGRKENVVHHFGNPNFEMIRHDVVEPILLEVDQI 192
Query: 181 YHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIGAKFLLTSTSEVYGDPLQHPQVE 240
YHLACPASPVHYKYNP+KTIKTNVVGTLNMLGLAKRI A+FLLTSTSEVYGDPLQHPQVE
Sbjct: 193 YHLACPASPVHYKYNPVKTIKTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVE 252
Query: 241 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSN 300
TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSN
Sbjct: 253 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSN 312
Query: 301 FVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMSLMEGEHIGPFNLGNPGEFTMLELAK 360
FVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM LMEGEH+GPFNLGNPGEFTMLELAK
Sbjct: 313 FVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAK 372
Query: 361 VVQDTIDPNARIEFRPNTADDPHKRKPDITRAKELLGWEPKVPLREGLPLMVTDFRKRIF 420
VVQDTIDPNA+IEFRPNT DDPHKRKPDI RAKELLGWEPK+PL +GLPLMVTDFRKRIF
Sbjct: 373 VVQDTIDPNAKIEFRPNTQDDPHKRKPDIGRAKELLGWEPKIPLHKGLPLMVTDFRKRIF 432
Query: 421 GDQEA 425
GDQ++
Sbjct: 433 GDQDS 437
>Os07g0674100 UDP-glucuronic acid decarboxylase
Length = 445
Score = 596 bits (1536), Expect = e-170, Method: Compositional matrix adjust.
Identities = 280/304 (92%), Positives = 293/304 (96%)
Query: 121 AGFVGSHLVDRLVERGDSVIVVDNFFTGRKDNVAHHLANPRFEVIRHDVVEPILLEVDQI 180
AGFVGSHLVDRL+ RGDSV+VVDN FTGRK+NV HH NP FE+IRHDVVEPILLEVDQI
Sbjct: 134 AGFVGSHLVDRLLARGDSVMVVDNLFTGRKENVLHHAGNPNFEMIRHDVVEPILLEVDQI 193
Query: 181 YHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIGAKFLLTSTSEVYGDPLQHPQVE 240
YHLACPASPVHYK+NP+KTIKTNVVGTLNMLGLAKR+GA+FLLTSTSEVYGDPLQHPQVE
Sbjct: 194 YHLACPASPVHYKHNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVE 253
Query: 241 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSN 300
TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSN
Sbjct: 254 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSN 313
Query: 301 FVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMSLMEGEHIGPFNLGNPGEFTMLELAK 360
FVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM LMEGEH+GPFNLGNPGEFTMLELAK
Sbjct: 314 FVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAK 373
Query: 361 VVQDTIDPNARIEFRPNTADDPHKRKPDITRAKELLGWEPKVPLREGLPLMVTDFRKRIF 420
VVQDTIDPNARIEFRPNTADDPHKRKPDI+RAKELLGWEPK+PL +GLPLMV DFR RIF
Sbjct: 374 VVQDTIDPNARIEFRPNTADDPHKRKPDISRAKELLGWEPKIPLHKGLPLMVQDFRDRIF 433
Query: 421 GDQE 424
GD +
Sbjct: 434 GDHK 437
>Os01g0837300 UDP-glucuronic acid decarboxylase
Length = 410
Score = 565 bits (1457), Expect = e-161, Method: Compositional matrix adjust.
Identities = 265/302 (87%), Positives = 288/302 (95%)
Query: 121 AGFVGSHLVDRLVERGDSVIVVDNFFTGRKDNVAHHLANPRFEVIRHDVVEPILLEVDQI 180
AGFVGSHLVDRL+E+GDSVIVVDNFFTGRKDNVAHHL NPRFE++RHDVVEPILLEVD+I
Sbjct: 109 AGFVGSHLVDRLLEQGDSVIVVDNFFTGRKDNVAHHLRNPRFELLRHDVVEPILLEVDRI 168
Query: 181 YHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIGAKFLLTSTSEVYGDPLQHPQVE 240
YHLACPASPVHYKYNPIKTIKTNV+GTLNMLGLAKRIGA+FLLTSTSEVYGDPL+HPQ E
Sbjct: 169 YHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLLTSTSEVYGDPLEHPQKE 228
Query: 241 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSN 300
TYWG+VNPIGVRSCYDEGKRTAETLTMDYHRG +EVRIARIFNTYGPRMC+DDGRVVSN
Sbjct: 229 TYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRIARIFNTYGPRMCLDDGRVVSN 288
Query: 301 FVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMSLMEGEHIGPFNLGNPGEFTMLELAK 360
FVAQALR++P+TVYGDGKQTRSFQYVSDLV GLM+LMEG+HIGPFNLGNPGEFTMLELA+
Sbjct: 289 FVAQALRRQPMTVYGDGKQTRSFQYVSDLVAGLMALMEGDHIGPFNLGNPGEFTMLELAQ 348
Query: 361 VVQDTIDPNARIEFRPNTADDPHKRKPDITRAKELLGWEPKVPLREGLPLMVTDFRKRIF 420
VV++TIDP A IEF+PNTADDPH RKPDIT+AK LL WEPKV LREGLPLMV DFR+RI
Sbjct: 349 VVKETIDPMATIEFKPNTADDPHMRKPDITKAKHLLRWEPKVSLREGLPLMVKDFRQRIL 408
Query: 421 GD 422
+
Sbjct: 409 DE 410
>Os03g0280800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35)
Length = 396
Score = 555 bits (1430), Expect = e-158, Method: Compositional matrix adjust.
Identities = 256/303 (84%), Positives = 289/303 (95%)
Query: 121 AGFVGSHLVDRLVERGDSVIVVDNFFTGRKDNVAHHLANPRFEVIRHDVVEPILLEVDQI 180
AGFVGSHLVD L+ RGDSVIVVDNFFTGRK+NVA HLA+PRFE+IRHDVVEPILLEVDQI
Sbjct: 93 AGFVGSHLVDELLARGDSVIVVDNFFTGRKENVARHLADPRFELIRHDVVEPILLEVDQI 152
Query: 181 YHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIGAKFLLTSTSEVYGDPLQHPQVE 240
YHLACPASPVHYK+NPIKTIKTNV+GTLNMLGLAKR+GA+FLLTSTSEVYGDPL+HPQ E
Sbjct: 153 YHLACPASPVHYKFNPIKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKE 212
Query: 241 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSN 300
+YWG+VNPIGVRSCYDEGKRTAETLTMDYHRGA +EVRIARIFNTYGPRMC+DDGRVVSN
Sbjct: 213 SYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 272
Query: 301 FVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMSLMEGEHIGPFNLGNPGEFTMLELAK 360
FVAQ LRK+P+TVYGDGKQTRSFQYVSDLV+GL++LME EHIGPFNLGNPGEFTMLELA+
Sbjct: 273 FVAQTLRKQPMTVYGDGKQTRSFQYVSDLVDGLITLMESEHIGPFNLGNPGEFTMLELAQ 332
Query: 361 VVQDTIDPNARIEFRPNTADDPHKRKPDITRAKELLGWEPKVPLREGLPLMVTDFRKRIF 420
VV++TIDP+AR+EF+PNTADDPH RKPDI++AK LL WEPK+ L++GLP MV+DF+KRI
Sbjct: 333 VVKETIDPSARVEFKPNTADDPHMRKPDISKAKSLLHWEPKISLKQGLPRMVSDFQKRIM 392
Query: 421 GDQ 423
++
Sbjct: 393 DEK 395
>Os03g0278000 UDP-glucuronic acid decarboxylase
Length = 350
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 213/300 (71%), Positives = 251/300 (83%), Gaps = 1/300 (0%)
Query: 121 AGFVGSHLVDRLVE-RGDSVIVVDNFFTGRKDNVAHHLANPRFEVIRHDVVEPILLEVDQ 179
AGF+GSHLVD+L+E VIV DNFFTG KDN+ + +PRFE+IRHDV +P+L+EVDQ
Sbjct: 43 AGFIGSHLVDKLMENEKHEVIVADNFFTGSKDNLKKWIGHPRFELIRHDVTQPLLVEVDQ 102
Query: 180 IYHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIGAKFLLTSTSEVYGDPLQHPQV 239
IYHLACPASP+ YK+NP+KTIKTNV+GTLNMLGLAKR+GA+ LLTSTSEVYGDPL+HPQ
Sbjct: 103 IYHLACPASPIFYKHNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQT 162
Query: 240 ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVS 299
E YWGNVNPIGVRSCYDEGKR AETL DYHR +E+RIARIFNTYGPRM IDDGRVVS
Sbjct: 163 EAYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVS 222
Query: 300 NFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMSLMEGEHIGPFNLGNPGEFTMLELA 359
NF+AQA+R EPLTV G QTRSF YV+D+V GL+ LM G++ GP NLGNPGEFTMLELA
Sbjct: 223 NFIAQAVRGEPLTVQKPGTQTRSFCYVADMVNGLIKLMNGDNTGPINLGNPGEFTMLELA 282
Query: 360 KVVQDTIDPNARIEFRPNTADDPHKRKPDITRAKELLGWEPKVPLREGLPLMVTDFRKRI 419
+ V++ I+P + NT DDP +RKPDIT+AKE+LGWEPK+ LR+GL LM DFR+R+
Sbjct: 283 ENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERL 342
>AK103728
Length = 209
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/196 (94%), Positives = 191/196 (97%)
Query: 229 VYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGP 288
VYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGP
Sbjct: 6 VYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGP 65
Query: 289 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMSLMEGEHIGPFNLG 348
RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM LMEGEH+GPFNLG
Sbjct: 66 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLG 125
Query: 349 NPGEFTMLELAKVVQDTIDPNARIEFRPNTADDPHKRKPDITRAKELLGWEPKVPLREGL 408
NPGEFTMLELAKVVQDTIDPNARIEFRPNTADDPHKRKPDI+RAKELLGWEPK+PL +GL
Sbjct: 126 NPGEFTMLELAKVVQDTIDPNARIEFRPNTADDPHKRKPDISRAKELLGWEPKIPLHKGL 185
Query: 409 PLMVTDFRKRIFGDQE 424
PLMV DFR RIFGD +
Sbjct: 186 PLMVQDFRDRIFGDHK 201
>Os01g0969100 NAD-dependent epimerase/dehydratase family protein
Length = 398
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 148/351 (42%), Gaps = 65/351 (18%)
Query: 121 AGFVGSHLVDRLVERGDSVIVVDNFFTGRKDNVAHHLANP------------RFEVIRHD 168
GF+GSHL ++L+ V+ + + + HL +P R +
Sbjct: 34 GGFIGSHLCEKLMAETAHVVYAVDVYCDK----IRHLVDPAPPHLHGRISFHRLNIKNDS 89
Query: 169 VVEPILLEVDQIYHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIGAKFLLTSTSE 228
+E ++ D +LA +P Y P+ TI +N + L ++ + + ST E
Sbjct: 90 RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 149
Query: 229 VYGD------PLQHP---QVETY----------WGNVNPIGVRSCYDEGKRTAETLTMDY 269
VYG P HP + E Y +G + + R Y K+ E L
Sbjct: 150 VYGKTIGSFLPTDHPLRKEPEFYVLKEDESPCIFGPI--VKQRWSYACAKQLIERLIFAE 207
Query: 270 HRGANLEVRIARIFNTYGPRMCIDDG---------RVVSNFVAQALRKEPLTVYGDGKQT 320
LE I R FN GPRM G RV++ F LR+EPL + G+
Sbjct: 208 GAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQ 267
Query: 321 RSFQYVSDLVEGLMSLMEGEHIGP---FNLGNPG-EFTMLELAKVVQDT----------- 365
R+F Y+ D +E + ++E FN+GNP E T+ +LA+++ +
Sbjct: 268 RTFVYIKDAIEAVHLMIENPARANGQIFNVGNPNNEVTVRQLAEMMTEVYANVSGEPPLD 327
Query: 366 ---IDPNARIEFRPNTADDPHKRKPDITRAKELLGWEPKVPLREGLPLMVT 413
ID +++ +F DD KR PD+T + LGW PK PL++ L +T
Sbjct: 328 EPMIDVSSK-QFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLETTLT 377
>Os10g0417600 NAD-dependent epimerase/dehydratase family protein
Length = 378
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 13/308 (4%)
Query: 121 AGFVGSHLVDRLVERGDSVIVVDNFFTGRKDNVAHHLANPRFEVIRHDVVEPILL---EV 177
GF+GSH+ RL G +I D + +++ + F ++ V++ L V
Sbjct: 38 GGFIGSHIARRLKSEGHYIIASD---WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNGV 94
Query: 178 DQIYHLACPASPVHY-KYNPIKTIKTNVVGTLNMLGLAKRIGAK-FLLTSTSEVYGDPLQ 235
D +++LA + + + N + N + + NML A+ G K F S++ +Y + Q
Sbjct: 95 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQ 154
Query: 236 -HPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDD 294
V + P + Y K E L Y + +E R+ R N YGP
Sbjct: 155 LETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG 214
Query: 295 GR--VVSNFVAQA-LRKEPLTVYGDGKQTRSFQYVSDLVEGLMSLMEGEHIGPFNLGNPG 351
GR + F +A + ++GDG QTRSF ++ + VEG++ L + + P N+G+
Sbjct: 215 GREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDE 274
Query: 352 EFTMLELAKVVQDTIDPNARIEFRPNTADDPHKRKPDITRAKELLGWEPKVPLREGLPLM 411
+M E+A+++ D I P + R D T KE LGW P + L++GL
Sbjct: 275 MVSMNEMAEIILSFEDRELPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFT 333
Query: 412 VTDFRKRI 419
+++I
Sbjct: 334 YFWIKEQI 341
>AK109046
Length = 350
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 139/308 (45%), Gaps = 31/308 (10%)
Query: 121 AGFVGSHLVDRLVERGDSVIVVDNFFTGRKDNVAHHLANPRFEVIRHDV-------VEPI 173
GF+GSH RL E G V V D H+ + + HDV +
Sbjct: 15 GGFIGSHTAKRLKEEGHFVRVADW-------KRQHYFEDSQICDEFHDVDLRDLNNCIKM 67
Query: 174 LLEVDQIYHLACPASPVHY-KYNPIKTIKTNVVGTLNMLGLAKRIGA--KFLLTSTSEVY 230
+D++Y A + + + N + N++ + NM+ A+R G+ +F +S++ +Y
Sbjct: 68 CEGMDEVYDFAADMGGMGFIQSNHSVILYNNIMISFNMVEAARRSGSVKRFFYSSSACIY 127
Query: 231 GDPLQHPQVETY-----WGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNT 285
++ Q+ET + P + Y K E Y++ +E RI R N
Sbjct: 128 P---EYRQLETANPGLKESDAWPAQPQDAYGLEKLVTEEFCKYYNKDFGIEFRIGRFHNI 184
Query: 286 YGPRMCIDDGR--VVSNFVAQAL-RKEPLTVYGDGKQTRSFQYVSDLVEGLMSLMEGEHI 342
YGP GR + F +AL + ++GDG+QTRSF Y+ D VEG++ LM +
Sbjct: 185 YGPHGTWKGGREKAPAAFCRKALVCGDVFEMWGDGEQTRSFCYIDDCVEGVLRLMRSDVR 244
Query: 343 GPFNLGNPGEFTMLELAKVVQDTI--DPNARIEFRPNTADDPHKRKPDITRAKELLGWEP 400
P N+G+ +M ++A +V D + ++ P + R D T +E LGW P
Sbjct: 245 EPINIGSEEMVSMNDMAHLVLDFAGKKDSTKLHHIPG-PEGVRGRNSDNTLIREKLGWAP 303
Query: 401 KVPLREGL 408
+ L++GL
Sbjct: 304 IINLKDGL 311
>Os11g0591100 NAD-dependent epimerase/dehydratase family protein
Length = 371
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 136/299 (45%), Gaps = 13/299 (4%)
Query: 121 AGFVGSHLVDRLVERGDSVIVVDNFFTGRKDNVAHHLANPRFEVIRHDVVEPIL---LEV 177
GF+ SH+ RL G +I D + +++ + F ++ V++ L V
Sbjct: 31 GGFIASHIARRLKSEGHYIIASD---WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTTGV 87
Query: 178 DQIYHLACPASPVHY-KYNPIKTIKTNVVGTLNMLGLAKRIGAK-FLLTSTSEVYGDPLQ 235
D +++LA + + + N + N + + NML A+ G K F S++ +Y + Q
Sbjct: 88 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQ 147
Query: 236 HPQVETY-WGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDD 294
V + + P + Y K E L Y + +E R+ R N YGP
Sbjct: 148 LDTVVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG 207
Query: 295 GR--VVSNFVAQALRK-EPLTVYGDGKQTRSFQYVSDLVEGLMSLMEGEHIGPFNLGNPG 351
GR + F +AL + ++GDG QTRSF ++ + VEG++ L + + P N+G+
Sbjct: 208 GREKAPAAFCRKALTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDE 267
Query: 352 EFTMLELAKVVQDTIDPNARIEFRPNTADDPHKRKPDITRAKELLGWEPKVPLREGLPL 410
+M E+A++V + I P + R D T KE LGW P + L++GL +
Sbjct: 268 MVSMNEMAEIVLSFENKQLPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRI 325
>Os03g0278200 NAD-dependent epimerase/dehydratase family protein
Length = 675
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 28/307 (9%)
Query: 121 AGFVGSHLVDRLVERGD--SVIVVDNF-FTGRKDNVAHHLANPRFEVIRHDVVEPILL-- 175
AGF+ SH+ +RLV ++V+D + N+ +P F+ ++ D+ L+
Sbjct: 15 AGFIASHVANRLVRNYPHYKIVVLDKLDYCSSLSNLNPSRPSPNFKFVKGDIASADLVNY 74
Query: 176 -----EVDQIYHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIGA--KFLLTSTSE 228
+D I H A + N + K N+ GT +L K G +F+ ST E
Sbjct: 75 LLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE 134
Query: 229 VYGDPLQHPQVETYWGN----VNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFN 284
VYG+ + V + + NP Y K AE L M Y R L V R N
Sbjct: 135 VYGETDEDAVVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYGLPVITTRGNN 188
Query: 285 TYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGL-MSLMEGEHIG 343
YGP + +++ F+ A+R PL ++GDG RS+ Y D+ E + L +GE
Sbjct: 189 VYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVGH 246
Query: 344 PFNLGNPGEFTMLELAKVVQDT--IDPNARIEFRPNTADDPHKRKPDITRAKELLGWEPK 401
+N+G E ++++AK + +D I F N + + D + K+ LGW +
Sbjct: 247 VYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQKLKK-LGWAER 305
Query: 402 VPLREGL 408
EGL
Sbjct: 306 TLWEEGL 312
>Os02g0791500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 437
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 139/325 (42%), Gaps = 41/325 (12%)
Query: 121 AGFVGSHLVDRLVERGDSVIVVDNFFT----GRKDNVAHHLANPRFEVIRHDVVEPILLE 176
AGFVG+H L +RGD V+ +DNF + K LA+ VI D+ + LL
Sbjct: 105 AGFVGTHCSLALRKRGDGVVGIDNFNSYYDPSLKKARRSLLASHGVFVIEGDINDGRLLA 164
Query: 177 -------VDQIYHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIGAK--FLLTSTS 227
+ HLA A + NP + +N+ G + +L K + + S+S
Sbjct: 165 KLFDVVPFTHVLHLAAQAGVRYAMENPASYVHSNIAGLVTLLEACKDADPQPAIVWASSS 224
Query: 228 EVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYG 287
VYG + P E+ + P S Y K+ E +T Y+ L + R F YG
Sbjct: 225 SVYGLNDKVPFTESDRTD-QPA---SLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYG 280
Query: 288 PRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ----TRSFQYVSDLVEGLMSLME----- 338
P D +F L+ +P+TVY GK R F Y+ D+V+G + ++
Sbjct: 281 PWGRPD--MAYFSFTRNILQGKPITVY-RGKNRVDLARDFTYIDDIVKGCLGSLDTAGKS 337
Query: 339 ----GEHIGP-----FNLGNPGEFTMLELAKVVQDTIDPNAR--IEFRPNTADDPHKRKP 387
G+ GP FNLGN T+ L +++ + A+ + P D P
Sbjct: 338 TGTGGKKRGPAPYRIFNLGNTSPVTVPNLVSILEKHLRVKAKKNVVEMPGNGDVPFTHA- 396
Query: 388 DITRAKELLGWEPKVPLREGLPLMV 412
+I+ A++ LG++P L GL V
Sbjct: 397 NISLARQQLGYKPTTNLDVGLKKFV 421
>Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)
(UDP-galactose 4-epimerase)
Length = 373
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 51/327 (15%)
Query: 121 AGFVGSHLVDRLVERGDSVIVVDNFFTG------RKDNVAHHLANPRFEVIRHDVVEPIL 174
AG++G+H V RL+E+G +V VVDNF R +A + R + I D+
Sbjct: 34 AGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSARLDFIAGDLKSKDD 93
Query: 175 LE-------VDQIYHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIGA-KFLLTST 226
+E D + H A + +P + NV GT+N+ + G K + +S+
Sbjct: 94 MEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAMTKYGCKKIVFSSS 153
Query: 227 SEVYGDPLQHPQVE-TYWGNVNPIGVRSCYDEGKRTAETLTMDYHR---GANLEVRIA-- 280
+ VYG P + P VE + +NP G T + + +Y R A+ E+R+
Sbjct: 154 ATVYGQPEKTPCVEDSKLSALNPYG----------TTKLVLENYFRQVQAADPEMRVILL 203
Query: 281 RIFNTYGPRMCIDDG---RVVSN----FVAQAL--RKEPLTVYG------DGKQTRSFQY 325
R FN G D G R + N ++ Q R+ L VYG DG R + +
Sbjct: 204 RYFNPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRRPELNVYGVDYPTRDGTAIRDYIH 263
Query: 326 VSDLVEGLMSLMEGEHIGP------FNLGNPGEFTMLELAKVVQDTIDPNARIEFRPNTA 379
V DL +G ++ +E P +NLG T+LE+ K ++ I+ P
Sbjct: 264 VVDLADGHIAALEKLFATPDIGCVAYNLGTGCGTTVLEVVKAFEEASGKKIPIKICPRRP 323
Query: 380 DDPHKRKPDITRAKELLGWEPKVPLRE 406
D + +AK+ LGW + + +
Sbjct: 324 GDCTEVYASTDKAKKELGWSARFGIED 350
>Os08g0526100 NAD-dependent epimerase/dehydratase family protein
Length = 478
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 134/329 (40%), Gaps = 41/329 (12%)
Query: 121 AGFVGSHLVDRLVERGDSVIVVDNFFT----GRKDNVAHHLANPRFEVIRHDVVEPILLE 176
AGFVG+H L RGD V+ +DNF + K LA+ V+ D+ + LLE
Sbjct: 132 AGFVGAHCSLALRARGDGVVGLDNFNSYYDPSLKRARQRLLASRGVAVLDADINDAALLE 191
Query: 177 -------VDQIYHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIG---AKFLLTST 226
+ HLA A + P + +NV G +++ +A + + S+
Sbjct: 192 RLFDAARFTHVLHLAAQAGVRYAMRAPQTYVASNVAGLVSVFEVAAKHADPQPAIVWASS 251
Query: 227 SEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTY 286
S VYG P E + + P S Y K+ E + Y+ L + R F Y
Sbjct: 252 SSVYGLNTDAPFSEEHRTD-RPA---SLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVY 307
Query: 287 GPRMCIDDGRVVSNFVAQALRKEPLTVY--GDGKQT-RSFQYVSDLVEGLMSLME----- 338
GP D +F + EP+T++ DG R F Y+ D+V+G + ++
Sbjct: 308 GPWGRPDMAYF--SFARSIVAGEPITLFRTADGADARRDFTYIDDVVKGCLGALDTAGES 365
Query: 339 -----GEHIGP-----FNLGNPGEFTMLELAKVVQDTI--DPNARIEFRPNTADDPHKRK 386
G+ GP +NLGN + + +++ + N R+ P+ D P
Sbjct: 366 TGTKSGKKRGPAPLRVYNLGNTSPVPVTRMVAILEKLLGRKANKRVVTMPSNGDVPFTH- 424
Query: 387 PDITRAKELLGWEPKVPLREGLPLMVTDF 415
+++ A G+ P PL GL V F
Sbjct: 425 ANVSHAARDFGYRPATPLDAGLRRFVDWF 453
>Os03g0249500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 484
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 133/328 (40%), Gaps = 43/328 (13%)
Query: 121 AGFVGSHLVDRLVERGDSVIVVDNFFT----GRKDNVAHHLANPRFEVIRHDVVEPILLE 176
AGFVG H L RGD V+ +DNF K A LA V+ D+ + LL
Sbjct: 127 AGFVGCHAAAALRRRGDGVLGLDNFNDYYDPALKRGRAALLARSGVYVVDGDIADAELLA 186
Query: 177 -------VDQIYHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIGAK--FLLTSTS 227
+ HLA A H +P+ ++ NV G + +L A+ + + S+S
Sbjct: 187 KLFDVVPFTHVLHLAAQAGVRHALVDPMSYVRANVGGFVALLEAARMANPQPAIVWASSS 246
Query: 228 EVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYG 287
VYG P E + P S Y K+ E + Y+ L + R F YG
Sbjct: 247 SVYGLNSHVPFSE-HDRTDRPA---SLYAATKKAGEEIAHAYNHIYGLSLTALRFFTVYG 302
Query: 288 PRMCIDDGRVVSNFVAQALRKEPLTVY----GDGKQT---RSFQYVSDLVEGLMSLME-- 338
P D F L P+TVY G QT R F Y+ D+V+G + ++
Sbjct: 303 PWGRPDMAYFF--FTRDILAGRPITVYESAGGGTHQTTISRDFTYIDDIVKGCVGALDTA 360
Query: 339 -------GEHIGP-----FNLGNPGEFTMLELAKVVQDTIDPNA--RIEFRPNTADDPHK 384
G+ GP +NLGN + +L +++ + A +I P D P+
Sbjct: 361 GRSTGSGGKKRGPAPFRTYNLGNTSPVPVTQLVDLLEKLLKVKAVRKIVKMPRNGDVPYT 420
Query: 385 RKPDITRAKELLGWEPKVPLREGLPLMV 412
+I+ A+ LG+ P L+ G+ V
Sbjct: 421 HA-NISLAQRELGYRPSTDLQTGVKKFV 447
>Os09g0504000 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 498
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 128/330 (38%), Gaps = 42/330 (12%)
Query: 121 AGFVGSHLVDRLVERGDSVIVVDNFFT----GRKDNVAHHLANPRFEVIRHDVVEPILLE 176
AGFVG+H L RGD V+ +DNF K LA V+ D+ + +LLE
Sbjct: 134 AGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKRARQRLLAGRGVLVLDADINDALLLE 193
Query: 177 -------VDQIYHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIG---AKFLLTST 226
+ HLA A + P + +NV G + +L +A + + S+
Sbjct: 194 KLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNVAGLVTVLEVAAKHADPQPAIVWASS 253
Query: 227 SEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTY 286
S VYG P E + + P S Y K+ E + Y+ L + R F Y
Sbjct: 254 SSVYGLNTDAPFSEEHRTD-RPA---SLYAATKKAGEAIAHTYNHIYGLSITGLRFFTVY 309
Query: 287 GPRMCIDDGRVVSNFVAQALRKEPLTVY--GDGKQT-RSFQYVSDLVEGLMSLMEGEH-- 341
GP D F + EP+T++ DG R F Y+ D+V+G + ++
Sbjct: 310 GPWGRPDMAYFF--FAKSIVSGEPITLFRAADGADARRDFTYIDDVVKGCLGALDTSGKS 367
Query: 342 --------------IGPFNLGNPGEFTMLELAKVVQDTI--DPNARIEFRPNTADDPHKR 385
+ +NLGN + + +++ + N RI P+ D P
Sbjct: 368 TGSSKSGKKSGPAPLRVYNLGNTSPVPVTRMVAILEKLLGKKANKRIVAMPSNGDVPFTH 427
Query: 386 KPDITRAKELLGWEPKVPLREGLPLMVTDF 415
++T A G+ P L GL V F
Sbjct: 428 A-NVTHAAHDFGYRPTTSLDAGLRHFVDWF 456
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.138 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,468,424
Number of extensions: 460467
Number of successful extensions: 999
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 988
Number of HSP's successfully gapped: 17
Length of query: 425
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 321
Effective length of database: 11,605,545
Effective search space: 3725379945
Effective search space used: 3725379945
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)