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Os01g0837300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronic acid decarboxylase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0199) R2 : 0.253
β1 : -0.859 (0.0728) R2dD : 0.237 R2D : 0.247
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0662 (0.0424) R2dN8 : 0.00534 R2N8 : 0.016
σ : 0.373
deviance : 63.7
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.83 0.277 10 -0.764 0.457 0.319 0.312 1.36 0.147 1.1 30.13 1172 -- --
35.07 0.276 10.1 -0.968 0.484 0.492 0.28 -- 0.165 1.17 30.32 1181 -- --
35.21 0.276 10 -0.781 0.46 0.325 -- 1.36 0.146 1.05 30.4 1171 -- --
35.33 0.277 10.1 -0.982 0.434 0.477 -- -- 0.136 0.991 30.67 1172 -- --
47.64 0.321 10 -0.789 -- 0.434 -- 1.32 0.168 -- 29.41 1153 -- --
45.36 0.316 10.1 -0.863 0.532 -- 0.443 -- 0.0579 1.14 -- -- -- --
46.17 0.318 10.1 -0.879 0.531 -- -- -- 0.0557 1.07 -- -- -- --
47.81 0.322 10.1 -0.978 -- 0.572 -- -- 0.178 -- 30.87 1132 -- --
60.62 0.363 10.1 -- 0.456 0.353 -- -- 0.218 0.78 32.15 1116 -- --
63.7 0.373 10.1 -0.859 -- -- -- -- 0.0662 -- -- -- -- --
66.53 0.382 10.1 -- 0.517 -- -- -- 0.154 0.998 -- -- -- --
73.37 0.399 10 -- -- 0.447 -- -- 0.252 -- 31.62 1114 -- --
83.16 0.426 10.1 -- -- -- -- -- 0.161 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.24 precipitation 0.1 90 < th dose independent rect. 3 16
2 30.24 precipitation 0.1 90 < th dose dependent rect. 3 16
3 30.42 temperature 15.0 90 > th dose independent rect. 3 16
4 30.57 wind 9.0 90 < th dose independent rect. 19 8
6 30.59 temperature 10.0 90 > th dose independent rect. 19 8
7 30.59 temperature 30.0 90 < th dose independent rect. 19 8
8 30.59 humidity 50.0 90 > th dose independent rect. 19 8
10 30.59 atmosphere 995.0 90 > th dose independent rect. 19 8
11 30.59 radiation 1.0 90 < th dose independent rect. 19 8
17 30.59 atmosphere 1015.0 90 < th dose independent rect. 3 16
18 30.59 radiation 1.0 90 < th dose dependent rect. 19 8
23 30.71 precipitation 0.1 270 < th dose independent rect. 13 17
24 30.71 precipitation 0.1 270 < th dose dependent rect. 13 17
25 30.84 radiation 20.0 270 < th dose dependent rect. 17 9
30 30.94 atmosphere 995.0 270 > th dose independent rect. 17 9
34 31.07 wind 9.0 270 < th dose independent rect. 17 9
36 31.11 radiation 10.0 270 < th dose independent rect. 17 9
38 31.13 precipitation 0.1 90 < th dose independent rect. 19 8
39 31.13 precipitation 0.1 90 < th dose dependent rect. 19 8
40 31.17 humidity 50.0 270 > th dose independent rect. 17 9
42 31.18 temperature 10.0 270 > th dose independent rect. 17 9
49 31.22 wind 9.0 270 < th dose independent rect. 6 7
50 31.22 humidity 50.0 90 > th dose dependent rect. 3 6
51 31.24 wind 9.0 90 < th dose independent rect. 3 16
62 31.34 humidity 60.0 270 > th dose dependent rect. 1 5
65 31.36 precipitation 0.1 270 < th dose independent rect. 6 7
66 31.36 precipitation 0.1 270 < th dose dependent rect. 6 7
67 31.37 temperature 10.0 270 > th dose independent rect. 6 7
68 31.37 atmosphere 995.0 270 > th dose independent rect. 6 7
69 31.37 atmosphere 1015.0 270 < th dose independent rect. 6 7
70 31.37 temperature 10.0 270 > th dose independent rect. 13 17
78 31.46 temperature 10.0 270 > th dose dependent rect. 1 5
79 31.46 wind 7.0 90 < th dose dependent rect. 3 6
102 31.58 wind 9.0 270 < th dose independent rect. 6 19
105 31.59 humidity 60.0 270 > th dose dependent rect. 3 2
109 31.61 humidity 50.0 90 > th dose dependent rect. 19 8
115 31.64 wind 9.0 270 < th dose independent rect. 5 22
116 31.64 temperature 10.0 270 > th dose dependent rect. 3 2
123 31.69 precipitation 0.1 270 < th dose independent rect. 1 5
124 31.69 precipitation 0.1 270 < th dose dependent rect. 1 5
129 31.72 wind 9.0 270 < th dose dependent rect. 1 5
133 31.75 radiation 1.0 270 < th dose dependent rect. 5 21
143 31.79 wind 9.0 270 < th dose independent rect. 13 17
144 31.79 wind 9.0 270 < th dose dependent rect. 3 2
150 31.80 radiation 1.0 270 < th dose dependent rect. 8 17
151 31.80 radiation 1.0 270 < th dose dependent rect. 6 19
160 31.86 precipitation 0.1 270 < th dose independent rect. 3 2
161 31.86 precipitation 0.1 270 < th dose dependent rect. 3 2
178 31.93 radiation 1.0 270 < th dose independent rect. 8 17
181 31.94 wind 9.0 270 < th dose independent rect. 1 5
182 31.94 temperature 10.0 270 > th dose independent rect. 1 5
184 31.94 temperature 30.0 270 < th dose independent rect. 1 5
185 31.94 humidity 50.0 270 > th dose independent rect. 1 5
188 31.94 atmosphere 995.0 270 > th dose independent rect. 1 5
189 31.94 atmosphere 1015.0 270 < th dose independent rect. 1 5
190 31.94 radiation 20.0 270 < th dose independent rect. 1 5
195 31.94 temperature 10.0 270 > th dose independent rect. 6 19
196 31.94 radiation 40.0 270 < th dose dependent rect. 1 6
220 31.98 radiation 40.0 90 < th dose dependent rect. 3 6
251 32.05 humidity 50.0 270 > th dose independent rect. 6 7
268 32.06 temperature 10.0 270 > th dose dependent rect. 6 7
271 32.07 radiation 40.0 90 < th dose independent rect. 3 16
299 32.16 atmosphere 995.0 90 > th dose independent rect. 3 16
302 32.17 radiation 1.0 270 < th dose dependent rect. 3 2
305 32.18 wind 9.0 270 < th dose independent rect. 3 2
306 32.18 temperature 10.0 270 > th dose independent rect. 3 2
308 32.18 temperature 30.0 270 < th dose independent rect. 3 2
309 32.18 humidity 50.0 270 > th dose independent rect. 3 2
312 32.18 atmosphere 995.0 270 > th dose independent rect. 3 2
313 32.18 atmosphere 1010.0 270 < th dose independent rect. 3 2
315 32.18 radiation 1.0 270 < th dose independent rect. 3 2
321 32.18 temperature 10.0 270 > th dose independent rect. 5 22
327 32.20 radiation 30.0 90 < th dose independent rect. 3 6
328 32.20 radiation 1.0 270 > th dose independent rect. 6 7
332 32.22 precipitation 0.1 90 < th dose independent rect. 3 5
334 32.22 precipitation 0.1 90 < th dose dependent rect. 3 5
339 32.23 atmosphere 995.0 270 > th dose independent rect. 6 19
351 32.30 atmosphere 995.0 90 > th dose dependent rect. 19 8
369 32.34 wind 9.0 90 < th dose dependent rect. 19 8
387 32.40 wind 9.0 90 < th dose independent rect. 3 5
388 32.40 temperature 10.0 90 > th dose independent rect. 3 5
390 32.40 temperature 30.0 90 < th dose independent rect. 3 5
391 32.40 humidity 50.0 90 > th dose independent rect. 3 5
393 32.40 atmosphere 995.0 90 > th dose independent rect. 3 5
394 32.40 atmosphere 1015.0 90 < th dose independent rect. 3 5
404 32.44 precipitation 0.1 270 < th dose independent rect. 17 8
407 32.44 precipitation 0.1 270 < th dose dependent rect. 17 8
433 32.53 atmosphere 1015.0 90 < th dose independent rect. 19 8
442 32.55 wind 9.0 270 < th dose dependent rect. 6 7
446 32.56 temperature 10.0 270 > th dose dependent rect. 13 17
492 32.73 wind 1.0 270 > th dose independent rect. 17 9
494 32.73 atmosphere 995.0 270 > th dose independent rect. 1 16
497 32.75 wind 1.0 270 > th dose independent rect. 6 7
542 32.79 humidity 60.0 90 > th dose dependent rect. 3 8
553 32.80 radiation 40.0 270 < th dose independent rect. 14 16
565 32.81 temperature 10.0 10 > th dose dependent rect. 3 6
584 32.85 wind 9.0 270 < th dose dependent rect. 6 19
603 32.92 precipitation 0.1 270 < th dose independent rect. 6 19
606 32.92 precipitation 0.1 270 < th dose dependent rect. 6 19
620 32.96 wind 1.0 270 > th dose independent rect. 12 7
655 33.08 precipitation 0.1 270 < th dose independent rect. 12 7
659 33.08 precipitation 0.1 270 < th dose dependent rect. 12 7
662 33.09 wind 9.0 10 < th dose independent rect. 9 18
665 33.09 radiation 40.0 90 < th dose dependent rect. 3 16
679 33.13 temperature 10.0 270 > th dose dependent rect. 12 7
685 33.15 wind 9.0 270 < th dose independent rect. 19 17
694 33.17 temperature 20.0 270 > th dose independent rect. 12 7
731 33.24 temperature 10.0 270 > th dose independent rect. 12 7
733 33.24 atmosphere 1015.0 270 < th dose independent rect. 12 7
734 33.24 temperature 10.0 270 > th dose independent rect. 19 17
735 33.24 atmosphere 995.0 270 > th dose independent rect. 19 17
736 33.24 atmosphere 1015.0 270 < th dose independent rect. 6 19
744 33.25 radiation 40.0 90 < th dose dependent rect. 3 8
761 33.32 radiation 1.0 270 > th dose independent rect. 12 18
769 33.34 humidity 50.0 270 > th dose independent rect. 19 17
797 33.39 wind 7.0 10 < th dose independent rect. 3 6
802 33.39 temperature 10.0 10 > th dose independent rect. 3 6
806 33.39 temperature 30.0 10 < th dose independent rect. 3 6
808 33.39 humidity 50.0 10 > th dose independent rect. 3 6
812 33.39 atmosphere 995.0 10 > th dose independent rect. 3 6
814 33.39 atmosphere 1015.0 10 < th dose independent rect. 3 6
818 33.39 temperature 10.0 10 > th dose independent rect. 9 18
840 33.41 atmosphere 995.0 270 > th dose independent rect. 13 17
854 33.43 radiation 10.0 270 < th dose dependent rect. 1 14
937 33.54 temperature 10.0 10 > th dose dependent rect. 9 5