BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0837300 Os01g0837300|AB079063
(410 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0837300 UDP-glucuronic acid decarboxylase 717 0.0
Os03g0280800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35) 567 e-162
Os01g0315800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35) 561 e-160
Os05g0363200 UDP-glucuronic acid decarboxylase 540 e-154
Os07g0674100 UDP-glucuronic acid decarboxylase 540 e-154
Os03g0278000 UDP-glucuronic acid decarboxylase 453 e-127
AK103728 349 3e-96
Os01g0969100 NAD-dependent epimerase/dehydratase family pro... 99 6e-21
AK109046 92 8e-19
Os10g0417600 NAD-dependent epimerase/dehydratase family pro... 92 1e-18
Os11g0591100 NAD-dependent epimerase/dehydratase family pro... 92 1e-18
Os03g0278200 NAD-dependent epimerase/dehydratase family pro... 83 5e-16
Os02g0791500 Similar to Nucleotide sugar epimerase-like pro... 73 3e-13
Os03g0249500 Similar to Nucleotide sugar epimerase-like pro... 70 2e-12
>Os01g0837300 UDP-glucuronic acid decarboxylase
Length = 410
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/383 (91%), Positives = 351/383 (91%)
Query: 28 RPGPRSWVGYXXXXXXXXXXXXGALIASSFFLLRPYLFSLSPSSHVPDRRPLFSFASHTS 87
RPGPRSWVGY GALIASSFFLLRPYLFSLSPSSHVPDRRPLFSFASHTS
Sbjct: 28 RPGPRSWVGYLLREQRLLFVLLGALIASSFFLLRPYLFSLSPSSHVPDRRPLFSFASHTS 87
Query: 88 SASXXXXXXXXXXXXXXXXXXXXFVGSHLVDRLLEQGDSVIVVDNFFTGRKDNVAHHLRN 147
SAS FVGSHLVDRLLEQGDSVIVVDNFFTGRKDNVAHHLRN
Sbjct: 88 SASGVPPGFRPPPRRVVVTGGAGFVGSHLVDRLLEQGDSVIVVDNFFTGRKDNVAHHLRN 147
Query: 148 PRFELLRHDVVEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGA 207
PRFELLRHDVVEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGA
Sbjct: 148 PRFELLRHDVVEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGA 207
Query: 208 RFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRI 267
RFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRI
Sbjct: 208 RFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRI 267
Query: 268 ARIFNTYGPRMCLDDGRVVSNFVAQALRRQPMTVYGDGKQTRSFQYVSDLVAGLMALMEG 327
ARIFNTYGPRMCLDDGRVVSNFVAQALRRQPMTVYGDGKQTRSFQYVSDLVAGLMALMEG
Sbjct: 268 ARIFNTYGPRMCLDDGRVVSNFVAQALRRQPMTVYGDGKQTRSFQYVSDLVAGLMALMEG 327
Query: 328 DHIGPFNLGNPGEFTMLELAQVVKETIDPMATIEFKPNTADDPHMRKPDITKAKHLLRWE 387
DHIGPFNLGNPGEFTMLELAQVVKETIDPMATIEFKPNTADDPHMRKPDITKAKHLLRWE
Sbjct: 328 DHIGPFNLGNPGEFTMLELAQVVKETIDPMATIEFKPNTADDPHMRKPDITKAKHLLRWE 387
Query: 388 PKVSLREGLPLMVKDFRQRILDE 410
PKVSLREGLPLMVKDFRQRILDE
Sbjct: 388 PKVSLREGLPLMVKDFRQRILDE 410
>Os03g0280800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35)
Length = 396
Score = 567 bits (1462), Expect = e-162, Method: Compositional matrix adjust.
Identities = 266/300 (88%), Positives = 285/300 (95%)
Query: 111 FVGSHLVDRLLEQGDSVIVVDNFFTGRKDNVAHHLRNPRFELLRHDVVEPILLEVDRIYH 170
FVGSHLVD LL +GDSVIVVDNFFTGRK+NVA HL +PRFEL+RHDVVEPILLEVD+IYH
Sbjct: 95 FVGSHLVDELLARGDSVIVVDNFFTGRKENVARHLADPRFELIRHDVVEPILLEVDQIYH 154
Query: 171 LACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLLTSTSEVYGDPLEHPQKETY 230
LACPASPVHYK+NPIKTIKTNVMGTLNMLGLAKR+GARFLLTSTSEVYGDPLEHPQKE+Y
Sbjct: 155 LACPASPVHYKFNPIKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKESY 214
Query: 231 WGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRIARIFNTYGPRMCLDDGRVVSNFV 290
WGHVNPIGVRSCYDEGKRTAETLTMDYHRG GVEVRIARIFNTYGPRMCLDDGRVVSNFV
Sbjct: 215 WGHVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFV 274
Query: 291 AQALRRQPMTVYGDGKQTRSFQYVSDLVAGLMALMEGDHIGPFNLGNPGEFTMLELAQVV 350
AQ LR+QPMTVYGDGKQTRSFQYVSDLV GL+ LME +HIGPFNLGNPGEFTMLELAQVV
Sbjct: 275 AQTLRKQPMTVYGDGKQTRSFQYVSDLVDGLITLMESEHIGPFNLGNPGEFTMLELAQVV 334
Query: 351 KETIDPMATIEFKPNTADDPHMRKPDITKAKHLLRWEPKVSLREGLPLMVKDFRQRILDE 410
KETIDP A +EFKPNTADDPHMRKPDI+KAK LL WEPK+SL++GLP MV DF++RI+DE
Sbjct: 335 KETIDPSARVEFKPNTADDPHMRKPDISKAKSLLHWEPKISLKQGLPRMVSDFQKRIMDE 394
>Os01g0315800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35)
Length = 425
Score = 561 bits (1446), Expect = e-160, Method: Compositional matrix adjust.
Identities = 263/300 (87%), Positives = 286/300 (95%)
Query: 111 FVGSHLVDRLLEQGDSVIVVDNFFTGRKDNVAHHLRNPRFELLRHDVVEPILLEVDRIYH 170
FVGSHLVDRL+E+GDSVIVVDNFFTGRKDNVAHHL NPRFE++RHDVVEPILLEVD+IYH
Sbjct: 123 FVGSHLVDRLVERGDSVIVVDNFFTGRKDNVAHHLANPRFEVIRHDVVEPILLEVDQIYH 182
Query: 171 LACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLLTSTSEVYGDPLEHPQKETY 230
LACPASPVHYKYNPIKTIKTNV+GTLNMLGLAKRIGA+FLLTSTSEVYGDPL+HPQ ETY
Sbjct: 183 LACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIGAKFLLTSTSEVYGDPLQHPQVETY 242
Query: 231 WGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRIARIFNTYGPRMCLDDGRVVSNFV 290
WG+VNPIGVRSCYDEGKRTAETLTMDYHRG +EVRIARIFNTYGPRMC+DDGRVVSNFV
Sbjct: 243 WGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFV 302
Query: 291 AQALRRQPMTVYGDGKQTRSFQYVSDLVAGLMALMEGDHIGPFNLGNPGEFTMLELAQVV 350
AQALR++P+TVYGDGKQTRSFQYVSDLV GLM+LMEG+HIGPFNLGNPGEFTMLELA+VV
Sbjct: 303 AQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMSLMEGEHIGPFNLGNPGEFTMLELAKVV 362
Query: 351 KETIDPMATIEFKPNTADDPHMRKPDITKAKHLLRWEPKVSLREGLPLMVKDFRQRILDE 410
++TIDP A IEF+PNTADDPH RKPDIT+AK LL WEPKV LREGLPLMV DFR+RI +
Sbjct: 363 QDTIDPNARIEFRPNTADDPHKRKPDITRAKELLGWEPKVPLREGLPLMVTDFRKRIFGD 422
>Os05g0363200 UDP-glucuronic acid decarboxylase
Length = 447
Score = 540 bits (1392), Expect = e-154, Method: Compositional matrix adjust.
Identities = 251/300 (83%), Positives = 277/300 (92%)
Query: 111 FVGSHLVDRLLEQGDSVIVVDNFFTGRKDNVAHHLRNPRFELLRHDVVEPILLEVDRIYH 170
FVGSHLVDRL+E+GDSVIVVDN FTGRK+NV HH NP FE++RHDVVEPILLEVD+IYH
Sbjct: 135 FVGSHLVDRLVERGDSVIVVDNLFTGRKENVVHHFGNPNFEMIRHDVVEPILLEVDQIYH 194
Query: 171 LACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLLTSTSEVYGDPLEHPQKETY 230
LACPASPVHYKYNP+KTIKTNV+GTLNMLGLAKRI ARFLLTSTSEVYGDPL+HPQ ETY
Sbjct: 195 LACPASPVHYKYNPVKTIKTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETY 254
Query: 231 WGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRIARIFNTYGPRMCLDDGRVVSNFV 290
WG+VNPIGVRSCYDEGKRTAETLTMDYHRG +EVRIARIFNTYGPRMC+DDGRVVSNFV
Sbjct: 255 WGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFV 314
Query: 291 AQALRRQPMTVYGDGKQTRSFQYVSDLVAGLMALMEGDHIGPFNLGNPGEFTMLELAQVV 350
AQALR++P+TVYGDGKQTRSFQYVSDLV GLM LMEG+H+GPFNLGNPGEFTMLELA+VV
Sbjct: 315 AQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVV 374
Query: 351 KETIDPMATIEFKPNTADDPHMRKPDITKAKHLLRWEPKVSLREGLPLMVKDFRQRILDE 410
++TIDP A IEF+PNT DDPH RKPDI +AK LL WEPK+ L +GLPLMV DFR+RI +
Sbjct: 375 QDTIDPNAKIEFRPNTQDDPHKRKPDIGRAKELLGWEPKIPLHKGLPLMVTDFRKRIFGD 434
>Os07g0674100 UDP-glucuronic acid decarboxylase
Length = 445
Score = 540 bits (1390), Expect = e-154, Method: Compositional matrix adjust.
Identities = 250/300 (83%), Positives = 279/300 (93%)
Query: 111 FVGSHLVDRLLEQGDSVIVVDNFFTGRKDNVAHHLRNPRFELLRHDVVEPILLEVDRIYH 170
FVGSHLVDRLL +GDSV+VVDN FTGRK+NV HH NP FE++RHDVVEPILLEVD+IYH
Sbjct: 136 FVGSHLVDRLLARGDSVMVVDNLFTGRKENVLHHAGNPNFEMIRHDVVEPILLEVDQIYH 195
Query: 171 LACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLLTSTSEVYGDPLEHPQKETY 230
LACPASPVHYK+NP+KTIKTNV+GTLNMLGLAKR+GARFLLTSTSEVYGDPL+HPQ ETY
Sbjct: 196 LACPASPVHYKHNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETY 255
Query: 231 WGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRIARIFNTYGPRMCLDDGRVVSNFV 290
WG+VNPIGVRSCYDEGKRTAETLTMDYHRG +EVRIARIFNTYGPRMC+DDGRVVSNFV
Sbjct: 256 WGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFV 315
Query: 291 AQALRRQPMTVYGDGKQTRSFQYVSDLVAGLMALMEGDHIGPFNLGNPGEFTMLELAQVV 350
AQALR++P+TVYGDGKQTRSFQYVSDLV GLM LMEG+H+GPFNLGNPGEFTMLELA+VV
Sbjct: 316 AQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 375
Query: 351 KETIDPMATIEFKPNTADDPHMRKPDITKAKHLLRWEPKVSLREGLPLMVKDFRQRILDE 410
++TIDP A IEF+PNTADDPH RKPDI++AK LL WEPK+ L +GLPLMV+DFR RI +
Sbjct: 376 QDTIDPNARIEFRPNTADDPHKRKPDISRAKELLGWEPKIPLHKGLPLMVQDFRDRIFGD 435
>Os03g0278000 UDP-glucuronic acid decarboxylase
Length = 350
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/298 (71%), Positives = 249/298 (83%), Gaps = 1/298 (0%)
Query: 111 FVGSHLVDRLLE-QGDSVIVVDNFFTGRKDNVAHHLRNPRFELLRHDVVEPILLEVDRIY 169
F+GSHLVD+L+E + VIV DNFFTG KDN+ + +PRFEL+RHDV +P+L+EVD+IY
Sbjct: 45 FIGSHLVDKLMENEKHEVIVADNFFTGSKDNLKKWIGHPRFELIRHDVTQPLLVEVDQIY 104
Query: 170 HLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLLTSTSEVYGDPLEHPQKET 229
HLACPASP+ YK+NP+KTIKTNV+GTLNMLGLAKR+GAR LLTSTSEVYGDPLEHPQ E
Sbjct: 105 HLACPASPIFYKHNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQTEA 164
Query: 230 YWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRIARIFNTYGPRMCLDDGRVVSNF 289
YWG+VNPIGVRSCYDEGKR AETL DYHR G+E+RIARIFNTYGPRM +DDGRVVSNF
Sbjct: 165 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNF 224
Query: 290 VAQALRRQPMTVYGDGKQTRSFQYVSDLVAGLMALMEGDHIGPFNLGNPGEFTMLELAQV 349
+AQA+R +P+TV G QTRSF YV+D+V GL+ LM GD+ GP NLGNPGEFTMLELA+
Sbjct: 225 IAQAVRGEPLTVQKPGTQTRSFCYVADMVNGLIKLMNGDNTGPINLGNPGEFTMLELAEN 284
Query: 350 VKETIDPMATIEFKPNTADDPHMRKPDITKAKHLLRWEPKVSLREGLPLMVKDFRQRI 407
VKE I+P T+ NT DDP RKPDITKAK +L WEPK+ LR+GL LM DFR+R+
Sbjct: 285 VKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERL 342
>AK103728
Length = 209
Score = 349 bits (895), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 160/192 (83%), Positives = 178/192 (92%)
Query: 217 VYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRIARIFNTYGP 276
VYGDPL+HPQ ETYWG+VNPIGVRSCYDEGKRTAETLTMDYHRG +EVRIARIFNTYGP
Sbjct: 6 VYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGP 65
Query: 277 RMCLDDGRVVSNFVAQALRRQPMTVYGDGKQTRSFQYVSDLVAGLMALMEGDHIGPFNLG 336
RMC+DDGRVVSNFVAQALR++P+TVYGDGKQTRSFQYVSDLV GLM LMEG+H+GPFNLG
Sbjct: 66 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLG 125
Query: 337 NPGEFTMLELAQVVKETIDPMATIEFKPNTADDPHMRKPDITKAKHLLRWEPKVSLREGL 396
NPGEFTMLELA+VV++TIDP A IEF+PNTADDPH RKPDI++AK LL WEPK+ L +GL
Sbjct: 126 NPGEFTMLELAKVVQDTIDPNARIEFRPNTADDPHKRKPDISRAKELLGWEPKIPLHKGL 185
Query: 397 PLMVKDFRQRIL 408
PLMV+DFR RI
Sbjct: 186 PLMVQDFRDRIF 197
>Os01g0969100 NAD-dependent epimerase/dehydratase family protein
Length = 398
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 141/341 (41%), Gaps = 59/341 (17%)
Query: 111 FVGSHLVDRLLEQGDSVIVVDNFFTGRKDNVAHHLRNP------------RFELLRHDVV 158
F+GSHL ++L+ + V+ + + + HL +P R + +
Sbjct: 36 FIGSHLCEKLMAETAHVVYAVDVYCDK----IRHLVDPAPPHLHGRISFHRLNIKNDSRL 91
Query: 159 EPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLLTSTSEVY 218
E ++ D +LA +P Y P+ TI +N + L ++ R + ST EVY
Sbjct: 92 EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVY 151
Query: 219 GD------PLEHPQKETYWGHV----------NPI-GVRSCYDEGKRTAETLTMDYHRGG 261
G P +HP ++ +V PI R Y K+ E L
Sbjct: 152 GKTIGSFLPTDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYACAKQLIERLIFAEGAEN 211
Query: 262 GVEVRIARIFNTYGPRMCLDDG---------RVVSNFVAQALRRQPMTVYGDGKQTRSFQ 312
G+E I R FN GPRM G RV++ F LRR+P+ + G+ R+F
Sbjct: 212 GLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFV 271
Query: 313 YVSDLVAGLMALMEGDHIGP---FNLGNP-GEFTMLELAQVVKETI----------DPMA 358
Y+ D + + ++E FN+GNP E T+ +LA+++ E +PM
Sbjct: 272 YIKDAIEAVHLMIENPARANGQIFNVGNPNNEVTVRQLAEMMTEVYANVSGEPPLDEPMI 331
Query: 359 TI---EFKPNTADDPHMRKPDITKAKHLLRWEPKVSLREGL 396
+ +F DD R PD+T L W PK L++ L
Sbjct: 332 DVSSKQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLL 372
>AK109046
Length = 350
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 135/316 (42%), Gaps = 23/316 (7%)
Query: 111 FVGSHLVDRLLEQGDSVIVVDNFFTGRKDNVAHHLRNPRFELLRHDV-------VEPILL 163
F+GSH RL E+G V V D H+ + + HDV +
Sbjct: 17 FIGSHTAKRLKEEGHFVRVADW-------KRQHYFEDSQICDEFHDVDLRDLNNCIKMCE 69
Query: 164 EVDRIYHLACPASPVHY-KYNPIKTIKTNVMGTLNMLGLAKRIGA--RFLLTSTSEVYGD 220
+D +Y A + + + N + N+M + NM+ A+R G+ RF +S++ +Y +
Sbjct: 70 GMDEVYDFAADMGGMGFIQSNHSVILYNNIMISFNMVEAARRSGSVKRFFYSSSACIYPE 129
Query: 221 --PLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRIARIFNTYGPRM 278
LE P + Y K E Y++ G+E RI R N YGP
Sbjct: 130 YRQLETANPGLKESDAWPAQPQDAYGLEKLVTEEFCKYYNKDFGIEFRIGRFHNIYGPHG 189
Query: 279 CLDDGR--VVSNFVAQAL-RRQPMTVYGDGKQTRSFQYVSDLVAGLMALMEGDHIGPFNL 335
GR + F +AL ++GDG+QTRSF Y+ D V G++ LM D P N+
Sbjct: 190 TWKGGREKAPAAFCRKALVCGDVFEMWGDGEQTRSFCYIDDCVEGVLRLMRSDVREPINI 249
Query: 336 GNPGEFTMLELAQVVKETIDPMATIEFKPNTA-DDPHMRKPDITKAKHLLRWEPKVSLRE 394
G+ +M ++A +V + + + + R D T + L W P ++L++
Sbjct: 250 GSEEMVSMNDMAHLVLDFAGKKDSTKLHHIPGPEGVRGRNSDNTLIREKLGWAPIINLKD 309
Query: 395 GLPLMVKDFRQRILDE 410
GL + +I +E
Sbjct: 310 GLKRTFDWIKIQIENE 325
>Os10g0417600 NAD-dependent epimerase/dehydratase family protein
Length = 378
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 139/319 (43%), Gaps = 33/319 (10%)
Query: 111 FVGSHLVDRLLEQGDSVIVVDNFFTGRKDNVAHHLRNPRFELLRHDVVEPILL---EVDR 167
F+GSH+ RL +G +I D + +++ + F L+ V++ L VD
Sbjct: 40 FIGSHIARRLKSEGHYIIASD---WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNGVDH 96
Query: 168 IYHLACPASPVHY-KYNPIKTIKTNVMGTLNMLGLAKRIGA-RFLLTSTSEVYGDPLEHP 225
+++LA + + + N + N M + NML A+ G RF S++ +Y P E
Sbjct: 97 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIY--P-EFK 153
Query: 226 QKET--------YWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRIARIFNTYGPR 277
Q ET W P + Y K E L Y + G+E R+ R N YGP
Sbjct: 154 QLETNVSLKESDAW----PAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPF 209
Query: 278 MCLDDGRVVSNFVAQALRRQPMT------VYGDGKQTRSFQYVSDLVAGLMALMEGDHIG 331
GR + A R+ T ++GDG QTRSF ++ + V G++ L + D
Sbjct: 210 GTWKGGREKA---PAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFRE 266
Query: 332 PFNLGNPGEFTMLELAQVVKETIDPMATIEFKPNTADDPHMRKPDITKAKHLLRWEPKVS 391
P N+G+ +M E+A+++ D I P + R D T K L W P +
Sbjct: 267 PVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPTMK 325
Query: 392 LREGLPLMVKDFRQRILDE 410
L++GL +++I E
Sbjct: 326 LKDGLRFTYFWIKEQIEKE 344
>Os11g0591100 NAD-dependent epimerase/dehydratase family protein
Length = 371
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 138/313 (44%), Gaps = 21/313 (6%)
Query: 111 FVGSHLVDRLLEQGDSVIVVDNFFTGRKDNVAHHLRNPRFELLRHDVVEPIL---LEVDR 167
F+ SH+ RL +G +I D + +++ + F L+ V++ L VD
Sbjct: 33 FIASHIARRLKSEGHYIIASD---WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTTGVDH 89
Query: 168 IYHLACPASPVHY-KYNPIKTIKTNVMGTLNMLGLAKRIGA-RFLLTSTSEVYG-----D 220
+++LA + + + N + N M + NML A+ G RF S++ +Y D
Sbjct: 90 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLD 149
Query: 221 PLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRIARIFNTYGPRMCL 280
+ ++ W P + Y K E L Y + G+E R+ R N YGP
Sbjct: 150 TVVSLKESDAW----PAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTW 205
Query: 281 DDGR--VVSNFVAQALRRQP-MTVYGDGKQTRSFQYVSDLVAGLMALMEGDHIGPFNLGN 337
GR + F +AL ++GDG QTRSF ++ + V G++ L + D P N+G+
Sbjct: 206 KGGREKAPAAFCRKALTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGS 265
Query: 338 PGEFTMLELAQVVKETIDPMATIEFKPNTADDPHMRKPDITKAKHLLRWEPKVSLREGLP 397
+M E+A++V + I P + R D T K L W P + L++GL
Sbjct: 266 DEMVSMNEMAEIVLSFENKQLPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPTMRLKDGLR 324
Query: 398 LMVKDFRQRILDE 410
+ ++++ E
Sbjct: 325 ITYFWIKEQLEKE 337
>Os03g0278200 NAD-dependent epimerase/dehydratase family protein
Length = 675
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 131/310 (42%), Gaps = 28/310 (9%)
Query: 111 FVGSHLVDRLLEQGD--SVIVVDNF-FTGRKDNVAHHLRNPRFELLRHDVVEPILLE--- 164
F+ SH+ +RL+ ++V+D + N+ +P F+ ++ D+ L+
Sbjct: 17 FIASHVANRLVRNYPHYKIVVLDKLDYCSSLSNLNPSRPSPNFKFVKGDIASADLVNYLL 76
Query: 165 ----VDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGA--RFLLTSTSEVY 218
+D I H A + N + K N+ GT +L K G RF+ ST EVY
Sbjct: 77 TTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVY 136
Query: 219 GDPLEHP----QKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRIARIFNTY 274
G+ E + + NP Y K AE L M Y R G+ V R N Y
Sbjct: 137 GETDEDAVVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYGLPVITTRGNNVY 190
Query: 275 GPRMCLDDGRVVSNFVAQALRRQPMTVYGDGKQTRSFQYVSDLVAGLMALMEGDHIG-PF 333
GP + +++ F+ A+R P+ ++GDG RS+ Y D+ ++ +G +
Sbjct: 191 GPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVGHVY 248
Query: 334 NLGNPGEFTMLELAQVVKET--IDPMATIEFKPNTADDPHMRKPDITKAKHLLRWEPKVS 391
N+G E ++++A+ + + +D I F N + D K K L W +
Sbjct: 249 NIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQKLKK-LGWAERTL 307
Query: 392 LREGLPLMVK 401
EGL ++
Sbjct: 308 WEEGLKKTIE 317
>Os02g0791500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 437
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 134/329 (40%), Gaps = 51/329 (15%)
Query: 111 FVGSHLVDRLLEQGDSVIVVDNFFT--------GRKDNVAHH--------LRNPRFELLR 154
FVG+H L ++GD V+ +DNF + R+ +A H + + R
Sbjct: 107 FVGTHCSLALRKRGDGVVGIDNFNSYYDPSLKKARRSLLASHGVFVIEGDINDGRLLAKL 166
Query: 155 HDVVEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGAR--FLLT 212
DVV + HLA A + NP + +N+ G + +L K + +
Sbjct: 167 FDVV-----PFTHVLHLAAQAGVRYAMENPASYVHSNIAGLVTLLEACKDADPQPAIVWA 221
Query: 213 STSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRIARIFN 272
S+S VYG + P E+ S Y K+ E +T Y+ G+ + R F
Sbjct: 222 SSSSVYGLNDKVPFTES----DRTDQPASLYAATKKAGEEITHTYNHIYGLSITGLRFFT 277
Query: 273 TYGPRMCLDDGRVVSNFVAQALRRQPMTVYGDGKQ----TRSFQYVSDLVAGLMALME-- 326
YGP D +F L+ +P+TVY GK R F Y+ D+V G + ++
Sbjct: 278 VYGPWGRPD--MAYFSFTRNILQGKPITVY-RGKNRVDLARDFTYIDDIVKGCLGSLDTA 334
Query: 327 -------GDHIGP-----FNLGNPGEFTMLELAQVVKETIDPMA--TIEFKPNTADDPHM 372
G GP FNLGN T+ L ++++ + A + P D P
Sbjct: 335 GKSTGTGGKKRGPAPYRIFNLGNTSPVTVPNLVSILEKHLRVKAKKNVVEMPGNGDVP-F 393
Query: 373 RKPDITKAKHLLRWEPKVSLREGLPLMVK 401
+I+ A+ L ++P +L GL VK
Sbjct: 394 THANISLARQQLGYKPTTNLDVGLKKFVK 422
>Os03g0249500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 484
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 130/331 (39%), Gaps = 51/331 (15%)
Query: 111 FVGSHLVDRLLEQGDSVIVVDNFFTGRKDNVAHHLRNPRFELLRH--------DVVEPIL 162
FVG H L +GD V+ +DNF D L+ R LL D+ + L
Sbjct: 129 FVGCHAAAALRRRGDGVLGLDNF----NDYYDPALKRGRAALLARSGVYVVDGDIADAEL 184
Query: 163 LE-------VDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGAR--FLLTS 213
L + HLA A H +P+ ++ NV G + +L A+ + + S
Sbjct: 185 LAKLFDVVPFTHVLHLAAQAGVRHALVDPMSYVRANVGGFVALLEAARMANPQPAIVWAS 244
Query: 214 TSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRIARIFNT 273
+S VYG P E H S Y K+ E + Y+ G+ + R F
Sbjct: 245 SSSVYGLNSHVPFSE----HDRTDRPASLYAATKKAGEEIAHAYNHIYGLSLTALRFFTV 300
Query: 274 YGPRMCLDDGRVVSNFVAQALRRQPMTVY----GDGKQT---RSFQYVSDLVAGLMALME 326
YGP D F L +P+TVY G QT R F Y+ D+V G + ++
Sbjct: 301 YGPWGRPDMAYFF--FTRDILAGRPITVYESAGGGTHQTTISRDFTYIDDIVKGCVGALD 358
Query: 327 ---------GDHIGP-----FNLGNPGEFTMLELAQVVKETIDPMAT--IEFKPNTADDP 370
G GP +NLGN + +L ++++ + A I P D P
Sbjct: 359 TAGRSTGSGGKKRGPAPFRTYNLGNTSPVPVTQLVDLLEKLLKVKAVRKIVKMPRNGDVP 418
Query: 371 HMRKPDITKAKHLLRWEPKVSLREGLPLMVK 401
+ +I+ A+ L + P L+ G+ V+
Sbjct: 419 YTHA-NISLAQRELGYRPSTDLQTGVKKFVR 448
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.139 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,521,702
Number of extensions: 504747
Number of successful extensions: 946
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 937
Number of HSP's successfully gapped: 14
Length of query: 410
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 307
Effective length of database: 11,657,759
Effective search space: 3578932013
Effective search space used: 3578932013
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)