Os05g0363200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucuronic acid decarboxylase.
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Os05g0363200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucuronic acid decarboxylase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.8 | 0.503 | 12.6 | 0.766 | 1.04 | 0.0319 | -0.306 | -5.36 | 0.471 | 22.8 | 1005 | 30 | -- | -- |
| 122.35 | 0.515 | 12.5 | 1.07 | 1.08 | -0.65 | -0.113 | -- | 0.57 | 22.6 | 1003 | 18 | -- | -- |
| 115.19 | 0.5 | 12.6 | 0.781 | 1.04 | 0.019 | -- | -5.29 | 0.471 | 22.7 | 1005 | 30 | -- | -- |
| 119.36 | 0.512 | 12.5 | 0.985 | 1.02 | -0.982 | -- | -- | 0.431 | 22.7 | 1003 | 2 | -- | -- |
| 182.35 | 0.632 | 12.5 | 0.845 | -- | -0.213 | -- | -4.18 | 0.459 | -- | 1005 | 30 | -- | -- |
| 131.29 | 0.537 | 12.5 | 0.874 | 1.03 | -- | -0.233 | -- | 0.48 | 22.8 | -- | -- | -- | -- |
| 131.52 | 0.537 | 12.5 | 0.884 | 1.03 | -- | -- | -- | 0.481 | 22.8 | -- | -- | -- | -- |
| 183.95 | 0.632 | 12.5 | 1.01 | -- | -1.03 | -- | -- | 0.432 | -- | 1003 | 2 | -- | -- |
| 144.31 | 0.56 | 12.6 | -- | 1.03 | -0.756 | -- | -- | 0.332 | 22.8 | 1003 | 2 | -- | -- |
| 197.56 | 0.657 | 12.5 | 0.905 | -- | -- | -- | -- | 0.487 | -- | -- | -- | -- | -- |
| 152.12 | 0.577 | 12.6 | -- | 1.04 | -- | -- | -- | 0.382 | 22.8 | -- | -- | -- | -- |
| 210.22 | 0.675 | 12.5 | -- | -- | -0.821 | -- | -- | 0.333 | -- | 1003 | 2 | -- | -- |
| 219.17 | 0.691 | 12.5 | -- | -- | -- | -- | -- | 0.387 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.66 | wind | 1 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 2 | 107.68 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 3 | 108.37 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 5 | 109.10 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 24 | 23 |
| 8 | 109.77 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 1 | 18 |
| 16 | 111.10 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 20 | 111.31 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 35 | 112.15 | humidity | 90 | 30 | > th | dose independent | rect. | 1 | 5 |
| 39 | 112.31 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 48 | 112.81 | temperature | 20 | 10 | > th | dose independent | rect. | 16 | 14 |
| 55 | 113.09 | humidity | 80 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 58 | 113.19 | humidity | 80 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 59 | 113.20 | humidity | 90 | 30 | > th | dose dependent | rect. | 1 | 5 |
| 65 | 113.36 | humidity | 80 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 92 | 113.79 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 104 | 113.90 | temperature | 20 | 10 | > th | dose independent | rect. | 14 | 16 |
| 108 | 113.98 | wind | 9 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 132 | 114.24 | humidity | 90 | 10 | > th | dose dependent | rect. | 1 | 17 |
| 166 | 114.53 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 8 | 22 |
| 168 | 114.55 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 171 | 114.55 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 18 | 22 |
| 233 | 114.95 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 242 | 114.97 | atmosphere | 1005 | 30 | < th | dose dependent | no | NA | NA |
| 243 | 114.97 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 248 | 114.98 | atmosphere | 1005 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 249 | 114.98 | atmosphere | 1005 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 250 | 114.98 | atmosphere | 1005 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 253 | 114.99 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 10 |
| 255 | 115.01 | atmosphere | 1005 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 259 | 115.03 | atmosphere | 1005 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 260 | 115.03 | atmosphere | 1005 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 282 | 115.18 | temperature | 30 | 90 | < th | dose dependent | rect. | 18 | 7 |
| 308 | 115.38 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 8 | 18 |
| 315 | 115.42 | humidity | 80 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 357 | 115.63 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 9 | 10 |
| 367 | 115.66 | temperature | 10 | 270 | > th | dose dependent | rect. | 14 | 14 |
| 425 | 115.95 | atmosphere | 1000 | 10 | > th | dose independent | sin | 20 | NA |
| 434 | 115.98 | humidity | 80 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 472 | 116.10 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 484 | 116.15 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 9 |
| 494 | 116.17 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 6 | 20 |
| 498 | 116.18 | temperature | 25 | 30 | < th | dose independent | rect. | 1 | 17 |
| 504 | 116.19 | temperature | 25 | 270 | > th | dose dependent | rect. | 19 | 18 |
| 505 | 116.20 | humidity | 80 | 14400 | > th | dose independent | rect. | 23 | 7 |
| 507 | 116.20 | humidity | 90 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 534 | 116.27 | humidity | 80 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 541 | 116.29 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 9 | 23 |
| 547 | 116.31 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 7 | 23 |
| 553 | 116.33 | humidity | 80 | 14400 | < th | dose independent | rect. | 23 | 5 |
| 580 | 116.38 | atmosphere | 1000 | 10 | < th | dose independent | sin | 21 | NA |
| 594 | 116.41 | temperature | 15 | 90 | > th | dose dependent | rect. | 16 | 14 |
| 627 | 116.50 | wind | 3 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 647 | 116.54 | temperature | 15 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 720 | 116.73 | temperature | 20 | 10 | > th | dose independent | rect. | 1 | 5 |
| 722 | 116.73 | wind | 5 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 757 | 116.83 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 758 | 116.83 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 4 | 22 |
| 797 | 116.93 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 3 | 23 |
| 799 | 116.93 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 10 | 9 |
| 818 | 117.01 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 19 | 23 |
| 830 | 117.03 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 1 | 23 |
| 834 | 117.04 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 11 | 23 |
| 837 | 117.05 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 23 | 23 |
| 849 | 117.07 | atmosphere | 1000 | 10 | > th | dose independent | no | NA | NA |
| 852 | 117.07 | atmosphere | 1000 | 10 | < th | dose independent | no | NA | NA |
| 866 | 117.09 | wind | 1 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 872 | 117.10 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 3 | 23 |
| 882 | 117.12 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 21 | 23 |
| 887 | 117.13 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 11 | 23 |
| 888 | 117.13 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 17 | 23 |
| 909 | 117.17 | temperature | 25 | 270 | > th | dose dependent | sin | 8 | NA |
| 910 | 117.17 | wind | 9 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 949 | 117.25 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 13 | 23 |
| 980 | 117.32 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 15 | 23 |
| 997 | 117.36 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 13 | 15 |