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Os03g0278000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronic acid decarboxylase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.4 (0.0197) R2 : 0.0398
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.18 (0.0414) R2dN8 : 0.0514 R2N8 : 0.0398
σ : 0.371
deviance : 63.09
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
38.19 0.29 13.5 -0.569 0.464 0.714 0.0283 -2.62 0.0061 5.14 25.44 2643 -- --
40.13 0.295 13.4 0.155 0.451 0.448 0.00596 -- 0.168 5.21 26 2652 -- --
38.11 0.288 13.5 -0.632 0.479 0.744 -- -2.95 0.013 5.11 25.92 2632 -- --
40.06 0.295 13.4 0.143 0.446 0.44 -- -- 0.178 4.96 26.1 2640 -- --
49.12 0.326 13.5 -0.413 -- 0.673 -- -1.85 0.00898 -- 23.82 2665 -- --
47.73 0.324 13.4 0.284 0.492 -- 0.0381 -- 0.201 4.53 -- -- -- --
47.73 0.324 13.4 0.284 0.492 -- -- -- 0.201 4.53 -- -- -- --
50.27 0.33 13.4 0.173 -- 0.41 -- -- 0.201 -- 27.15 1273 -- --
40.54 0.297 13.4 -- 0.457 0.469 -- -- 0.163 4.99 25.98 2643 -- --
60.66 0.364 13.4 0.303 -- -- -- -- 0.214 -- -- -- -- --
49.86 0.33 13.4 -- 0.497 -- -- -- 0.169 4.51 -- -- -- --
50.41 0.331 13.4 -- -- 0.534 -- -- 0.176 -- 26.2 1257 -- --
63.09 0.371 13.4 -- -- -- -- -- 0.18 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.49 radiation 30 14400 < th dose independent rect. 16 13
4 35.57 radiation 30 14400 < th dose independent rect. 16 2
7 35.61 radiation 30 14400 < th dose independent rect. 16 9
9 35.65 radiation 30 14400 < th dose independent rect. 16 4
13 35.76 radiation 30 4320 < th dose independent rect. 16 16
15 35.85 radiation 1 4320 > th dose dependent rect. 18 11
20 36.05 radiation 10 4320 < th dose independent rect. 17 14
21 36.08 radiation 30 4320 < th dose independent rect. 24 8
25 36.25 radiation 30 4320 < th dose independent rect. 19 13
26 36.26 radiation 1 4320 < th dose independent rect. 18 11
28 36.28 radiation 40 14400 > th dose dependent rect. 8 1
29 36.29 radiation 30 4320 < th dose independent rect. 2 6
50 36.30 radiation 1 4320 > th dose dependent rect. 4 2
59 36.30 radiation 1 720 > th dose dependent rect. 18 11
66 36.32 radiation 1 14400 > th dose dependent rect. 18 1
76 36.33 radiation 1 4320 < th dose independent rect. 18 7
78 36.34 radiation 30 4320 < th dose independent rect. 6 2
80 36.35 radiation 40 14400 < th dose independent rect. 15 18
91 36.36 radiation 1 4320 < th dose independent rect. 18 1
121 36.62 humidity 70 14400 < th dose dependent rect. 18 2
124 36.64 humidity 70 14400 < th dose dependent rect. 18 13
138 36.69 radiation 10 4320 < th dose independent rect. 24 7
140 36.70 radiation 10 4320 < th dose independent rect. 2 5
154 36.72 radiation 20 14400 < th dose dependent rect. 24 5
155 36.73 wind 1 43200 > th dose dependent rect. 10 3
156 36.73 temperature 15 720 > th dose dependent rect. 14 9
159 36.74 wind 9 43200 < th dose dependent rect. 10 3
160 36.74 radiation 10 4320 < th dose dependent rect. 18 11
161 36.74 wind 5 43200 > th dose dependent rect. 24 16
162 36.75 wind 7 43200 < th dose independent sin 5 NA
163 36.75 wind 5 43200 < th dose independent rect. 2 14
164 36.75 wind 5 43200 < th dose independent rect. 24 16
165 36.75 wind 1 43200 > th dose dependent rect. 9 5
171 36.76 wind 7 43200 > th dose independent rect. 24 14
172 36.76 wind 7 43200 < th dose independent rect. 24 14
175 36.77 wind 7 43200 > th dose independent sin 5 NA
187 36.78 wind 5 43200 > th dose independent rect. 2 14
193 36.78 radiation 20 4320 > th dose dependent rect. 16 16
224 36.84 wind 7 43200 > th dose independent rect. 10 1
253 36.87 wind 5 43200 > th dose dependent sin 3 NA
254 36.87 temperature 15 720 > th dose dependent sin 16 NA
287 36.90 wind 7 43200 < th dose independent rect. 9 2
298 36.90 wind 7 43200 > th dose independent rect. 20 18
319 36.93 wind 5 43200 < th dose independent sin 2 NA
330 36.93 wind 5 43200 > th dose dependent rect. 19 21
333 36.94 radiation 1 4320 > th dose independent rect. 18 11
342 36.95 wind 5 43200 > th dose independent sin 2 NA
344 36.95 wind 7 43200 < th dose independent rect. 7 6
360 36.96 wind 7 43200 > th dose independent rect. 7 6
403 36.98 radiation 1 4320 > th dose independent rect. 18 1
469 37.02 temperature 15 720 > th dose dependent rect. 11 15
477 37.03 humidity 60 14400 < th dose independent rect. 17 3
506 37.05 radiation 30 14400 > th dose independent rect. 16 16
643 37.16 wind 5 43200 > th dose dependent no NA NA
649 37.16 wind 5 43200 > th dose dependent rect. 8 22
818 37.25 wind 5 43200 > th dose dependent rect. 13 23
889 37.29 temperature 30 720 < th dose dependent sin 16 NA
909 37.30 wind 5 43200 > th dose independent rect. 8 23
928 37.31 wind 5 43200 > th dose independent no NA NA
942 37.31 temperature 30 720 < th dose dependent rect. 17 6
975 37.33 wind 5 43200 < th dose independent no NA NA
984 37.33 wind 7 43200 < th dose independent rect. 6 23
988 37.33 radiation 20 4320 < th dose dependent rect. 2 4
992 37.33 radiation 20 4320 < th dose dependent rect. 20 10
993 37.33 wind 9 43200 < th dose dependent rect. 3 12