BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0276600 Os01g0276600|AK071739
(329 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0276600 Zinc finger, RING-type domain containing protein 416 e-117
Os03g0812200 Zinc finger, RING-type domain containing protein 145 6e-35
Os10g0487400 Zinc finger, RING-type domain containing protein 124 8e-29
Os05g0488800 Zinc finger, RING-type domain containing protein 123 2e-28
Os06g0101300 Zinc finger, RING-type domain containing protein 122 3e-28
Os03g0286100 113 2e-25
Os03g0324900 Zinc finger, RING-type domain containing protein 107 1e-23
Os03g0351800 Zinc finger, RING-type domain containing protein 107 1e-23
Os02g0767600 103 2e-22
Os05g0110000 Zinc finger, RING-type domain containing protein 98 8e-21
Os01g0972000 Zinc finger, RING-type domain containing protein 92 4e-19
Os01g0802000 Zinc finger, RING-type domain containing protein 92 4e-19
Os08g0487500 Zinc finger, RING-type domain containing protein 89 4e-18
Os12g0118700 Zinc finger, RING-type domain containing protein 86 3e-17
Os11g0119200 Zinc finger, RING-type domain containing protein 84 1e-16
Os05g0495000 83 3e-16
Os12g0140700 Zinc finger, RING-type domain containing protein 82 5e-16
Os12g0140233 Zinc finger, RING-type domain containing protein 82 5e-16
Os03g0271600 Zinc finger, RING-type domain containing protein 81 1e-15
Os02g0727700 Zinc finger, RING-type domain containing protein 78 1e-14
Os07g0631200 Zinc finger, RING-type domain containing protein 76 3e-14
Os09g0434200 Zinc finger, RING-type domain containing protein 74 1e-13
Os09g0242800 Zinc finger, RING-type domain containing protein 74 2e-13
Os02g0191500 Similar to Goliath homolog precursor (RING fin... 73 2e-13
Os11g0142600 72 5e-13
Os06g0633500 Zinc finger, RING-type domain containing protein 72 7e-13
Os11g0142800 71 1e-12
Os08g0464400 Zinc finger, RING-type domain containing protein 70 2e-12
Os12g0139100 70 3e-12
Os09g0344900 Zinc finger, RING-type domain containing protein 69 4e-12
Os03g0380100 69 7e-12
Os12g0143750 Zinc finger, RING-type domain containing protein 67 1e-11
Os01g0736600 Zinc finger, RING-type domain containing protein 66 4e-11
Os08g0104300 Similar to RING finger family protein 65 6e-11
>Os01g0276600 Zinc finger, RING-type domain containing protein
Length = 329
Score = 416 bits (1070), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/308 (73%), Positives = 226/308 (73%)
Query: 1 MAEEAAAGGLYYCHMCXXXXXXXXXXXXXXXIKCPYCHSGFVEEIESARGVATGGGGAIS 60
MAEEAAAGGLYYCHMC IKCPYCHSGFVEEIESARGVATGGGGAIS
Sbjct: 1 MAEEAAAGGLYYCHMCASTVSAVAAAEGEVEIKCPYCHSGFVEEIESARGVATGGGGAIS 60
Query: 61 SVWAPIIDGMVXXXXXDAVXXXXXXXXXXXXXXXXXXXXXXXXLLDFSESRRRTAALLLL 120
SVWAPIIDGMV DAV LLDFSESRRRTAALLLL
Sbjct: 61 SVWAPIIDGMVGGGGGDAVRRHRRSRRLADAAGADDGYYRDLALLDFSESRRRTAALLLL 120
Query: 121 MQEFRERQLQRLXXXXXXXXXXXXXXXXXXXTSRDAEGVALADYFLGPGLDALMQRVGDG 180
MQEFRERQLQRL TSRDAEGVALADYFLGPGLDALMQRVGDG
Sbjct: 121 MQEFRERQLQRLESATATISAAAAEAGAVVGTSRDAEGVALADYFLGPGLDALMQRVGDG 180
Query: 181 DAGRQGTLPAKKEAVESMPTVEVAAGGDCDSACAVCLEDYAAGERATEMPCRHRFHAKCI 240
DAGRQGTLPAKKEAVESMPTVEVAAGGDCDSACAVCLEDYAAGERATEMPCRHRFHAKCI
Sbjct: 181 DAGRQGTLPAKKEAVESMPTVEVAAGGDCDSACAVCLEDYAAGERATEMPCRHRFHAKCI 240
Query: 241 VPWLKMHSSCPVCRFQLPTDDDDDXXXXXXXXXXXXXXXXXXXQPAPRVDGGGLGRLPAV 300
VPWLKMHSSCPVCRFQLPTDDDDD QPAPRVDGGGLGRLPAV
Sbjct: 241 VPWLKMHSSCPVCRFQLPTDDDDDSSKSARGGAAHSGGGRRLSQPAPRVDGGGLGRLPAV 300
Query: 301 MQELRSIL 308
MQELRSIL
Sbjct: 301 MQELRSIL 308
>Os03g0812200 Zinc finger, RING-type domain containing protein
Length = 369
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 62/110 (56%), Positives = 83/110 (75%), Gaps = 4/110 (3%)
Query: 152 TSRDAEGVALADYFLGPGLDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGGDCDS 211
+S + GV+L DYFLGPGLD L+Q + + D R GT PAKKEAVE++PTV +
Sbjct: 198 SSNTSSGVSLGDYFLGPGLDILLQHLAESDLNRSGTPPAKKEAVEALPTVNIQEV----L 253
Query: 212 ACAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLPTDD 261
C+VCLED+ G A EMPC+H+FH++CI+PWL++HSSCP+CRFQLPT++
Sbjct: 254 GCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLPTEE 303
>Os10g0487400 Zinc finger, RING-type domain containing protein
Length = 304
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 78/112 (69%), Gaps = 9/112 (8%)
Query: 158 GVALADYFLGPGLDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEV------AAGGDCDS 211
G + DYF+GPGL+ L++++ + D R GT PA K A+ ++P V V AA G +
Sbjct: 112 GASFGDYFVGPGLEQLIEQLTENDPNRYGTPPAAKSALSTLPDVVVTDAMVAAADG---A 168
Query: 212 ACAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLPTDDDD 263
CAVC ED++ GE A +MPC+H +HA CI+PWL +H+SCP+CRF+LPTDD D
Sbjct: 169 ECAVCKEDFSPGEGAKQMPCKHIYHADCIMPWLDLHNSCPICRFELPTDDPD 220
>Os05g0488800 Zinc finger, RING-type domain containing protein
Length = 323
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 75/104 (72%), Gaps = 4/104 (3%)
Query: 161 LADYFLGPGLDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGGDCDSACAVCLEDY 220
L +Y LG GL L+Q + + D R GT PAKKEAVE++PTV++ +C+VCL+D
Sbjct: 151 LEEYVLGAGLSLLLQHLAESDPSRNGTPPAKKEAVEALPTVKIEEV----VSCSVCLDDL 206
Query: 221 AAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLPTDDDDD 264
G +A +MPC H+FH+ CI+PWL++HSSCPVCRF+LP+++ D
Sbjct: 207 EVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFELPSEETKD 250
>Os06g0101300 Zinc finger, RING-type domain containing protein
Length = 338
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 75/106 (70%), Gaps = 3/106 (2%)
Query: 159 VALADYFLGPGLDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAA---GGDCDSACAV 215
++L DYF+G GL+ L+Q++ + D R GT PA K AV ++P V V+A D + CAV
Sbjct: 145 ISLGDYFVGSGLEQLIQQLAENDPNRYGTPPAAKSAVAALPDVAVSADMMAADGGAQCAV 204
Query: 216 CLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLPTDD 261
C++D+ G A ++PC+H FH CI+PWL +HSSCPVCRF+LPTDD
Sbjct: 205 CMDDFHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTDD 250
>Os03g0286100
Length = 140
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 153 SRDAEGVALADYFLGPGLDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGGDCD-- 210
S D EG+ALADYF GP LD LMQ +GDGD GR+GTLP KKEA E+MPTVEV AG
Sbjct: 47 SLDVEGMALADYFFGPELDDLMQWLGDGDVGRKGTLPTKKEARETMPTVEVTAGHSASAF 106
Query: 211 -SACAVCLEDYAAGERATEMPCRHRFHAKCI 240
+A VC EDYA GE AT P RHRFHA +
Sbjct: 107 ATASTVCREDYAVGEHATGTPYRHRFHASAL 137
>Os03g0324900 Zinc finger, RING-type domain containing protein
Length = 320
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 6/82 (7%)
Query: 183 GRQGTLPAKKEAVESMPTVEV--AAGGDCDSACAVCLEDYAAGERATEMPCRHRFHAKCI 240
RQGT PA+KEAV ++PTV V AAG + C VCL+++ AG A EMPC+HRFH CI
Sbjct: 184 NRQGTPPARKEAVAALPTVRVHDAAG----ATCPVCLDEFEAGGEAREMPCKHRFHDGCI 239
Query: 241 VPWLKMHSSCPVCRFQLPTDDD 262
+PWL+ HSSCPVCR+QLPTDD+
Sbjct: 240 LPWLEAHSSCPVCRYQLPTDDE 261
>Os03g0351800 Zinc finger, RING-type domain containing protein
Length = 283
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 70/99 (70%), Gaps = 3/99 (3%)
Query: 161 LADYFLGPGLDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGG-DCDSACAVCLED 219
+ADYF+GPGLD L++++ D R+G PA + ++++MPTV++ DS C VC +
Sbjct: 136 IADYFVGPGLDDLIEQLTQND--RRGPPPATQSSIDAMPTVKITQRHLSGDSHCPVCKDK 193
Query: 220 YAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLP 258
+ G A EMPC+H +H+ CIVPWL+ H+SCPVCR++LP
Sbjct: 194 FELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELP 232
>Os02g0767600
Length = 335
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 65/96 (67%), Gaps = 3/96 (3%)
Query: 163 DYFLGPGLDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGGDCD-SACAVCLEDYA 221
+YF GP L+ L++ + D R G PA A++S+PTV++ D S C VC ED+
Sbjct: 150 NYFNGPNLNNLIEELTQND--RPGPAPAPSSAIDSLPTVQITGAHLSDGSQCPVCKEDFE 207
Query: 222 AGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQL 257
GE A +MPC+H +H+ CIVPWL++H+SCPVCR+QL
Sbjct: 208 LGEAARQMPCKHVYHSDCIVPWLRLHNSCPVCRYQL 243
>Os05g0110000 Zinc finger, RING-type domain containing protein
Length = 333
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 65/105 (61%), Gaps = 5/105 (4%)
Query: 161 LADYFLGPG----LDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGG-DCDSACAV 215
++D+ +G G LD L Q G A + PA K +VESMPTV +AA DS CAV
Sbjct: 86 MSDFLMGSGFERLLDQLTQIEAGGLARARENPPASKASVESMPTVTIAASHVGADSHCAV 145
Query: 216 CLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLPTD 260
C E + G+ A EMPC H +H CI+PWL + +SCPVCR ++PTD
Sbjct: 146 CKEPFELGDEAREMPCSHIYHQDCILPWLALRNSCPVCRHEMPTD 190
>Os01g0972000 Zinc finger, RING-type domain containing protein
Length = 334
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 166 LGPGLDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGG-DCDSACAVCLEDYAAGE 224
L P D L+ R+ A PA K AV+SMPT+ + A DS CAVC E +
Sbjct: 85 LRPLFDRLLLRIPS--ASDNPNPPASKAAVDSMPTILIGACHLAADSHCAVCKEPFHLAA 142
Query: 225 RATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLPTDDDD 263
A EMPC H +H CI+PWL +H+SCPVCR ++PTDD D
Sbjct: 143 EAREMPCAHIYHHNCILPWLALHNSCPVCRHRMPTDDHD 181
>Os01g0802000 Zinc finger, RING-type domain containing protein
Length = 329
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 156 AEGVALADYFLGPGLDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGG-DCDSACA 214
A+ + + +GP L+AL +++ + RQG PA + A++SMP V++ D C
Sbjct: 135 ADRPNFSRFLVGPSLEALFEQLLLHN-NRQGPPPAPQSAIDSMPVVKINLRHLRDDPHCP 193
Query: 215 VCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLP 258
VC + + G A EMPC+H +HA+CI+PWL H+SCPVCR LP
Sbjct: 194 VCTDKFEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLP 237
>Os08g0487500 Zinc finger, RING-type domain containing protein
Length = 271
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 189 PAKKEAVESMPTVEVAAGGDCD-SACAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMH 247
PA + AVE++P+ VAAG D + CAVC + AAGER +PC H +H +CI+PWL +
Sbjct: 184 PAARSAVEALPSAVVAAGEDGEGEECAVCRDGVAAGERVKRLPCSHGYHEECIMPWLDVR 243
Query: 248 SSCPVCRFQLPTDD 261
+SCP+CRF+LPTDD
Sbjct: 244 NSCPLCRFELPTDD 257
>Os12g0118700 Zinc finger, RING-type domain containing protein
Length = 499
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Query: 163 DYFLGPGLDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGGDC--DSACAVCLEDY 220
DY + L+++ + + R+G PA +E++P+V ++A D C VC +
Sbjct: 282 DYVDARQFEMLLEQFAEDNDSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCKDPI 341
Query: 221 AAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLPTDD 261
RA ++PC H +H+ CI+PWL ++CPVCR++LPTDD
Sbjct: 342 PTRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRYELPTDD 382
>Os11g0119200 Zinc finger, RING-type domain containing protein
Length = 491
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 163 DYFLGPGLDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGGDC--DSACAVCLEDY 220
DY + L+++ + ++ R+G PA +E++P+V ++ D C VC +
Sbjct: 274 DYVDARQFEMLLEQFAEDNSSRRGAPPAATSFIENLPSVIISTSHQINDDVICPVCKDPI 333
Query: 221 AAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLPTDD 261
RA ++PC H +H+ CI+PW ++CPVCR++LPTDD
Sbjct: 334 PTRARAKQLPCMHLYHSSCILPWFSSRNTCPVCRYELPTDD 374
>Os05g0495000
Length = 350
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 158 GVALADYFLGPGLDALMQRVGDG-DAGRQGTLPAKKEAVESMPTVEVAAGG-DCDSACAV 215
GV + GL+AL +++ + + RQG PA A+++MP V ++ + C V
Sbjct: 182 GVERRGGYYRAGLEALFEQLQNQLGSSRQGPPPAPPSAIDAMPVVTISRRHLRAEPRCPV 241
Query: 216 CLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLP 258
C +++ G A EMPC H +HA CIVPWL H+SCPVCR LP
Sbjct: 242 CQDEFQLGAEAREMPCAHLYHADCIVPWLVHHNSCPVCRHSLP 284
>Os12g0140700 Zinc finger, RING-type domain containing protein
Length = 197
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 181 DAGRQGTLPAKKEAVESMPTVEVAAGGDC-DSACAVCLEDYAAGERATEMPCRHRFHAKC 239
DA R G A + ++M ++ A D + CAVCLED+ AGE+ T MPC H FHA C
Sbjct: 113 DAYRNGGFGAIPASSKAMAELQEAMASDARERGCAVCLEDFEAGEKLTRMPCSHCFHATC 172
Query: 240 IVPWLKMHSSCPVCRFQLPTDD 261
I+ WL++ CP+CRF +PT D
Sbjct: 173 ILDWLRLSHRCPLCRFPMPTQD 194
>Os12g0140233 Zinc finger, RING-type domain containing protein
Length = 199
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 181 DAGRQGTLPAKKEAVESMPTVEVAAGGDC-DSACAVCLEDYAAGERATEMPCRHRFHAKC 239
DA R G A + ++M ++ A D + CAVCLED+ AGE+ T MPC H FHA C
Sbjct: 115 DAYRNGGFGAVPASSKAMAELQEAMASDARERGCAVCLEDFEAGEKLTRMPCSHCFHATC 174
Query: 240 IVPWLKMHSSCPVCRFQLPTDD 261
I+ WL++ CP+CRF +PT D
Sbjct: 175 ILDWLRLSHRCPLCRFPMPTQD 196
>Os03g0271600 Zinc finger, RING-type domain containing protein
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
Query: 189 PAKKEAVESMPTVEVAAGGDCDSACAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHS 248
PA K AVESMP+V VA G + CAVC E + G A EMPC+H +H CI+PWL + +
Sbjct: 114 PASKAAVESMPSVTVAGSG---AHCAVCQEAFEPGASAREMPCKHVYHQDCILPWLSLRN 170
Query: 249 SCPVCRFQL 257
SCPVCR +L
Sbjct: 171 SCPVCRREL 179
>Os02g0727700 Zinc finger, RING-type domain containing protein
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 195 VESMPTVEV-AAGGDCDSACAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVC 253
VES+PTV V AA GD + CAVC + AGERA +PC H +H CI+PWL + ++CP+C
Sbjct: 214 VESLPTVVVDAARGD--TQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLC 271
Query: 254 RFQLPTDD 261
R +LPTDD
Sbjct: 272 RHELPTDD 279
>Os07g0631200 Zinc finger, RING-type domain containing protein
Length = 185
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 186 GTLPAKKEAVESMPTV---EVAAGGDCDSACAVCLEDYAAGERATEMPCRHRFHAKCIVP 242
G PA K A+ S+ V E GGD CA+CL+ +AAG+ EMPC HRFH++C+
Sbjct: 59 GVPPASKAAIASLKEVKAGEDGEGGDSLGDCAICLDAFAAGK---EMPCGHRFHSECLER 115
Query: 243 WLKMHSSCPVCRFQLPT 259
WL +H SCPVCR +LP
Sbjct: 116 WLGVHGSCPVCRRELPA 132
>Os09g0434200 Zinc finger, RING-type domain containing protein
Length = 320
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 189 PAKKEAVESMPTV----EVAAGGDCDSACAVCLEDYAAGERATEMPCRHRFHAKCIVPWL 244
PA KE V ++P V E+ A ++ CAVC E ++ E+PC+H FH C+ PWL
Sbjct: 212 PASKEVVANLPVVTVTEEIIARLGKETQCAVCRESLLVDDKMQELPCKHLFHPPCLKPWL 271
Query: 245 KMHSSCPVCRFQLPTDD 261
++SCP+CR +L TDD
Sbjct: 272 DENNSCPICRHELRTDD 288
>Os09g0242800 Zinc finger, RING-type domain containing protein
Length = 163
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 192 KEAVESMPTVEVAAGGDCDSACAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCP 251
++AV S P V A G + C+VC E+ A + +PC H +HA CI PWL + S+CP
Sbjct: 49 RQAVVSQPPVVRATAGVAGTVCSVCTEEIAVADAVVRLPCAHWYHAGCISPWLGIRSTCP 108
Query: 252 VCRFQLPTDDD 262
+CR +LP DD
Sbjct: 109 MCRAELPASDD 119
>Os02g0191500 Similar to Goliath homolog precursor (RING finger protein 130)
Length = 375
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 190 AKKEAVESMPTVEVAAGGDCDSACAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSS 249
A + VES+P ++ + CAVC + +A+G+ +PC+H FH CI PWL + ++
Sbjct: 253 ASQLVVESLPEATLSEE-EASRGCAVCKDSFASGQIVALLPCKHYFHGDCIWPWLTIRTT 311
Query: 250 CPVCRFQLPTDDDD 263
CPVCR Q+ T+DDD
Sbjct: 312 CPVCRHQVRTEDDD 325
>Os11g0142600
Length = 269
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 188 LPAKKEAVESMPTVEVAAGGDC---DSACAVCLEDYAAGERATEMPCRHRFHAKCIVPWL 244
+PA +A+ ++P E + ACAVCLE + G+R +MPC H FHA CI WL
Sbjct: 183 VPASSDAIAALPVPETTVSETETREEEACAVCLEGFKEGDRVKKMPCSHDFHANCISEWL 242
Query: 245 KMHSSCPVCRFQLPTDDDDD 264
++ CP CRF LP + D +
Sbjct: 243 RVSRLCPHCRFALPAERDSE 262
>Os06g0633500 Zinc finger, RING-type domain containing protein
Length = 124
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 37/49 (75%)
Query: 213 CAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLPTDD 261
CAVC + A GE AT++PC H +H CI PWL + +SCPVCR++LPTDD
Sbjct: 50 CAVCKDGIAQGELATQLPCAHLYHGACIEPWLAIRNSCPVCRYELPTDD 98
>Os11g0142800
Length = 231
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 170 LDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGGDCDSACAVCLEDYAAGERATEM 229
LD ++Q DG+ G G PA A+ ++P + V C VCL+ + G++ +M
Sbjct: 103 LDGILQADDDGNGG--GATPASSMAIVNLPEITVGDEKGEAKDCPVCLQGFEEGDKLRKM 160
Query: 230 PC--RHRFHAKCIVPWLKMHSSCPVCRFQLPTDDDDD 264
PC H FH +CI WL ++ CP+CRF LP + ++D
Sbjct: 161 PCADSHCFHEQCIFSWLLINRHCPLCRFPLPAETEED 197
>Os08g0464400 Zinc finger, RING-type domain containing protein
Length = 211
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Query: 198 MPTVEVAAGGDCDSACAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQL 257
+PTVEV+ +ACA+C +D A +PC H +H++CIV WL+M +SCPVCR +L
Sbjct: 62 LPTVEVSEPA---TACAICKDDLPLAAPARRLPCGHLYHSECIVQWLEMRNSCPVCRSRL 118
Query: 258 PTDDDDD 264
P+D+ D
Sbjct: 119 PSDEPQD 125
>Os12g0139100
Length = 228
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 170 LDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGGDCDSACAVCLEDYAAGERATEM 229
LD ++Q DG+ G G PA A+ S+P + V C VCL+ + G++ M
Sbjct: 103 LDGILQPDDDGNGG--GATPASSMAIVSLPEITVGDEKGEAKDCPVCLQGFEEGDKLRRM 160
Query: 230 PC--RHRFHAKCIVPWLKMHSSCPVCRFQLP 258
PC H FH +CI WL ++ CP+CRF LP
Sbjct: 161 PCADSHCFHEQCIFSWLVINRHCPLCRFPLP 191
>Os09g0344900 Zinc finger, RING-type domain containing protein
Length = 227
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 210 DSACAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQL 257
+ AC +CLE + AGE+ PC H FH +CI PW+K H +CPVCRF L
Sbjct: 134 EKACTICLETFLAGEQVVATPCNHIFHQECITPWVKGHGNCPVCRFAL 181
>Os03g0380100
Length = 179
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 186 GTLPAKKEAVESMPTVEVAAGGDCDSACAVCLED----YAAGERATEMPCRHRFHAKCIV 241
G PA KEA+E++ V V + CA+CL AA R EMPC HRFH C+V
Sbjct: 89 GVAPAFKEAIEALRDVVVDQLAPA-AECAICLHGQDAATAAAGRWKEMPCGHRFHGVCLV 147
Query: 242 PWLKMHSSCPVCRFQLP 258
WL++H +CP+CR Q+P
Sbjct: 148 KWLRVHGTCPMCRHQMP 164
>Os12g0143750 Zinc finger, RING-type domain containing protein
Length = 131
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%)
Query: 202 EVAAGGDCDSACAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLPTDD 261
EV A G + CAVCL+D+ A E+ MPC H FH +CI WL++ CP+CR LPT
Sbjct: 59 EVTAAGAREEECAVCLQDFVAEEKLRMMPCSHTFHQRCIFDWLRLSCICPLCRRALPTQH 118
>Os01g0736600 Zinc finger, RING-type domain containing protein
Length = 197
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 194 AVESMPTVEV--AAGGDCDSACAVCLEDYAAGERATEMP-CRHRFHAKCIVPWLKMHSSC 250
A+ S P V AG D D+ C++CL +YA GE MP CRHRFH C+ WL+ ++SC
Sbjct: 101 AIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLRRNASC 160
Query: 251 PVCR 254
PVCR
Sbjct: 161 PVCR 164
>Os08g0104300 Similar to RING finger family protein
Length = 495
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 11/81 (13%)
Query: 185 QGTLPAKKE-------AVESMPTV---EVAAGGDCDSACAVCLEDYAAGERATEMPCRHR 234
+G +P +E V++MP++ +V S+CA+CLEDY+ GE+ +PCRH+
Sbjct: 232 RGRIPVTREFHGMSSQLVKAMPSLIFTKVQEDNSTSSSCAICLEDYSFGEKLRVLPCRHK 291
Query: 235 FHAKCIVPWL-KMHSSCPVCR 254
FHA C+ WL + CPVC+
Sbjct: 292 FHATCVDMWLTSWKTFCPVCK 312
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.137 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,059,667
Number of extensions: 331289
Number of successful extensions: 1630
Number of sequences better than 1.0e-10: 53
Number of HSP's gapped: 1705
Number of HSP's successfully gapped: 53
Length of query: 329
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 228
Effective length of database: 11,762,187
Effective search space: 2681778636
Effective search space used: 2681778636
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)