BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0542400 Os10g0542400|AK068088
(275 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0542400 Expansin/Lol pI family protein 473 e-134
Os03g0132200 Expansin-like protein A 352 2e-97
Os07g0475400 Similar to Expansin-like protein A (Fragment) 257 5e-69
Os06g0725300 Expansin/Lol pI family protein 191 6e-49
Os03g0106900 Beta-expansin precursor (Beta-expansin 1) 99 4e-21
Os03g0106500 Beta-expansin precursor (Beta-expansin 1) 99 4e-21
Os03g0106800 Beta-expansin precursor (Beta-expansin OsEXPB10) 97 1e-20
Os02g0658800 Beta-expansin 94 2e-19
Os04g0552200 Beta-expansin 5 93 2e-19
Os10g0555900 Beta-expansin precursor 89 4e-18
Os03g0102700 Beta-expansin precursor 87 1e-17
Os05g0246300 Expansin/Lol pI family protein 87 2e-17
Os10g0548600 Beta-expansin precursor 86 4e-17
Os04g0552000 Expansin/Lol pI family protein 85 5e-17
Os03g0102500 Similar to Beta-expansin precursor (Fragment) 76 2e-14
Os10g0555700 Beta-expansin 76 2e-14
Os10g0555600 Beta-expansin precursor 76 2e-14
Os10g0556100 beta-expansin EXPB4 [Oryza sativa (japonica cu... 76 3e-14
Os03g0645000 Beta-expansin 75 4e-14
Os02g0658600 Similar to Beta-expansin (Fragment) 75 6e-14
AK064012 70 1e-12
Os07g0496250 Barwin-related endoglucanase domain containing... 68 6e-12
Os08g0561900 Similar to Alpha expansin 26 67 1e-11
>Os10g0542400 Expansin/Lol pI family protein
Length = 275
Score = 473 bits (1217), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/275 (86%), Positives = 237/275 (86%)
Query: 1 MAVRCCXXXXXXXXXXXXXXXXXXXXXXXXCDRCVRRSKAGFRDSSIALNAGSCGYGSLA 60
MAVRCC CDRCVRRSKAGFRDSSIALNAGSCGYGSLA
Sbjct: 1 MAVRCCSSMASASVVLFFVVVGMSASMVSGCDRCVRRSKAGFRDSSIALNAGSCGYGSLA 60
Query: 61 ASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDEARSTNRTDLVLS 120
ASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDEARSTNRTDLVLS
Sbjct: 61 ASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDEARSTNRTDLVLS 120
Query: 121 XXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQ 180
QLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQ
Sbjct: 121 AAAYAAMARPGMAAQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQ 180
Query: 181 GGQTDIVAVDVATVGSSNWKFMTRDYGPAWSTAQAPAGPLQFRVVVTGGYDGKWVWADGE 240
GGQTDIVAVDVATVGSSNWKFMTRDYGPAWSTAQAPAGPLQFRVVVTGGYDGKWVWADGE
Sbjct: 181 GGQTDIVAVDVATVGSSNWKFMTRDYGPAWSTAQAPAGPLQFRVVVTGGYDGKWVWADGE 240
Query: 241 VLPRRWTAGRVYDAGVQIADVAQEGCYPCDTQEWK 275
VLPRRWTAGRVYDAGVQIADVAQEGCYPCDTQEWK
Sbjct: 241 VLPRRWTAGRVYDAGVQIADVAQEGCYPCDTQEWK 275
>Os03g0132200 Expansin-like protein A
Length = 279
Score = 352 bits (902), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 176/246 (71%), Positives = 196/246 (79%), Gaps = 3/246 (1%)
Query: 31 CDRCVRRSKAGFRDSSIALNAGSCGYGSLAASFNGG-HLAAASPALFRGGVGCGACFQVR 89
CDRCVRRS+A + SS+ L AGSCGYG+ AA+FNGG LAAA PAL+RGGVGCGAC+QVR
Sbjct: 36 CDRCVRRSRAAYYTSSLTLTAGSCGYGTAAATFNGGGFLAAAGPALYRGGVGCGACYQVR 95
Query: 90 CKDGKLCSTAGAKVVVTDEARSTNRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRV 149
CKD KLCS AGA+VVVTD AR TNRT LVLS L AVDVEYKRV
Sbjct: 96 CKDKKLCSNAGARVVVTDRAR-TNRTGLVLSSPAFAAMARPGMAASLTELAAVDVEYKRV 154
Query: 150 PCEYAAGRNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYGPA 209
PCEY R+LS+RV+E+SR P EL+I FLYQGGQTDIVAVDVA VGSS+WKFMTR++GP+
Sbjct: 155 PCEYRH-RSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHGPS 213
Query: 210 WSTAQAPAGPLQFRVVVTGGYDGKWVWADGEVLPRRWTAGRVYDAGVQIADVAQEGCYPC 269
WS A AP GPLQ R+VVTGGYDGKWVWAD EVLPRRW AG VYD GVQI D+AQEGC+PC
Sbjct: 214 WSMANAPPGPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDTGVQITDIAQEGCFPC 273
Query: 270 DTQEWK 275
DT EWK
Sbjct: 274 DTHEWK 279
>Os07g0475400 Similar to Expansin-like protein A (Fragment)
Length = 276
Score = 257 bits (657), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/250 (54%), Positives = 166/250 (66%), Gaps = 7/250 (2%)
Query: 31 CDRCVRRSKAGFRDSSIALNAGSCGYG-----SLAASFNGGHLAAASPALFRGGVGCGAC 85
C+RCVR KA + S L G G ++ NGG LAA P RGG+GCG C
Sbjct: 29 CERCVRNGKAAYSPSLSPLPPGGGGGCGYGAMAMEMELNGGFLAAGGPRQHRGGLGCGRC 88
Query: 86 FQVRCKDGKLCSTAGAKVVVTDEARSTNRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVE 145
FQ+RC++ ++CS AG +VV+TD RS N TD +L +L+ A+ VE
Sbjct: 89 FQMRCRNAEVCSNAGVRVVLTDFHRS-NSTDFLLGGPAFAGLAKPGMAHKLKKLDALSVE 147
Query: 146 YKRVPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRD 205
Y+R+PC+Y +NLSI VEE+S+ P L I+FLYQGGQTDI+AVDVA VGSS+W+FMTR
Sbjct: 148 YRRIPCDYK-DKNLSILVEEQSKRPNNLVIKFLYQGGQTDILAVDVAQVGSSDWRFMTRV 206
Query: 206 YGPAWSTAQAPAGPLQFRVVVTGGYDGKWVWADGEVLPRRWTAGRVYDAGVQIADVAQEG 265
YGP WS +AP GPLQFR VVTGGYDGKWVWAD EVLP W G+VYD G +IADVA+E
Sbjct: 207 YGPVWSIDRAPNGPLQFRAVVTGGYDGKWVWADREVLPANWQPGQVYDTGARIADVARES 266
Query: 266 CYPCDTQEWK 275
C C T +WK
Sbjct: 267 CLDCATLDWK 276
>Os06g0725300 Expansin/Lol pI family protein
Length = 313
Score = 191 bits (484), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 102/240 (42%), Positives = 140/240 (58%), Gaps = 25/240 (10%)
Query: 49 LNAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDE 108
L G+CG+G+ N +AA + LFR G CGAC+Q+RC+D +LC G KVVV D
Sbjct: 57 LTGGACGFGAAPMELN---VAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADM 113
Query: 109 AR------STNRTD------LVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAG 156
A+ NRT + +L +R ++V+++R+PCEY
Sbjct: 114 AKQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRES 173
Query: 157 RNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVATVGSS--------NWKFMTRDYGP 208
R L++RVEE SR P L+IRFLYQGGQTDI AV++A ++ +W++MTR G
Sbjct: 174 RRLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATPPSSSYYSSWRYMTRRDGA 233
Query: 209 --AWSTAQAPAGPLQFRVVVTGGYDGKWVWADGEVLPRRWTAGRVYDAGVQIADVAQEGC 266
W+T++AP GPL+ RVVVT G GKW+ +DGEVLP W G VYD G+++ DVA C
Sbjct: 234 PGVWTTSRAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVYDTGLRVTDVAVRSC 293
>Os03g0106900 Beta-expansin precursor (Beta-expansin 1)
Length = 267
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 8/211 (3%)
Query: 50 NAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTD-E 108
N G+CGY + + G + + +F+ G GCG+CF+++C + CS A + VTD
Sbjct: 60 NGGACGYKDVDKAPFLGMNSCGNDPIFKDGKGCGSCFEIKCSKPEACSDKPALIHVTDMN 119
Query: 109 ARSTNRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSR 168
LS +LR +D +++RV C+Y A ++ +E+ S
Sbjct: 120 DEPIAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKCKYPADTKITFHIEKASN 179
Query: 169 PPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYGPAW--STAQAPAGPLQFRVVV 226
P L++ Y G D+V V++ GS WK + +G W T + GP RV
Sbjct: 180 -PNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLKGPFSVRVTT 238
Query: 227 TGGYDGKWVWADGEVLPRRWTAGRVYDAGVQ 257
GG K + D +P W A VY + VQ
Sbjct: 239 EGGE--KIIAED--AIPDGWKADSVYKSNVQ 265
>Os03g0106500 Beta-expansin precursor (Beta-expansin 1)
Length = 267
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 8/211 (3%)
Query: 50 NAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTD-E 108
N G+CGY + + G + + +F+ G GCG+CF+++C + CS A + VTD
Sbjct: 60 NGGACGYKDVDKAPFLGMNSCGNDPIFKDGKGCGSCFEIKCSKPEACSDKPALIHVTDMN 119
Query: 109 ARSTNRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSR 168
LS +LR +D +++RV C+Y A ++ +E+ S
Sbjct: 120 DEPIAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKCKYPADTKITFHIEKASN 179
Query: 169 PPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYGPAW--STAQAPAGPLQFRVVV 226
P L++ Y G D+V V++ GS WK + +G W T + GP RV
Sbjct: 180 -PNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLKGPFSVRVTT 238
Query: 227 TGGYDGKWVWADGEVLPRRWTAGRVYDAGVQ 257
GG K + D +P W A VY + VQ
Sbjct: 239 EGGE--KIIAED--AIPDGWKADSVYKSNVQ 265
>Os03g0106800 Beta-expansin precursor (Beta-expansin OsEXPB10)
Length = 267
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 8/212 (3%)
Query: 50 NAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTD-E 108
N G+CGY + + G + + +F+ G GCG+CF+V+C + CS + +TD
Sbjct: 60 NGGACGYKDIDKAPFLGMNSCGNDPIFKDGKGCGSCFEVKCSKPEACSDKPVIIHITDMN 119
Query: 109 ARSTNRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSR 168
LS +LR +D++++RV C+Y ++ VE+ S
Sbjct: 120 TEPIAAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGETKVTFHVEKGSN 179
Query: 169 PPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYGPAW--STAQAPAGPLQFRVVV 226
P ++ Y GG D+V V++ GS WK + +G W T + GP RV
Sbjct: 180 -PNYFAVLVKYVGGDGDVVKVELKEKGSEEWKPLNESWGAIWRIDTPKPLKGPFSLRVTT 238
Query: 227 TGGYDGKWVWADGEVLPRRWTAGRVYDAGVQI 258
D K V D V+P W A +Y + +Q+
Sbjct: 239 ES--DQKLVAND--VIPDNWKANALYKSEIQV 266
>Os02g0658800 Beta-expansin
Length = 292
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 50 NAGSCGYGSLAAS--FNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTD 107
+ G+CGY + F+ +AA SP+L++GG GCGAC++V+C CS A VV+TD
Sbjct: 81 DGGACGYQTAVGQRPFSS-MIAAGSPSLYKGGKGCGACYEVKCTTNAACSGQPATVVITD 139
Query: 108 EARS----TNRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRV 163
E +S +LR + V+Y+RVPC+Y +G N++ RV
Sbjct: 140 ECPGGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKY-SGVNIAFRV 198
Query: 164 EEKSRPPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYGPAW----STAQAPAGP 219
++ + P + ++ G D+ AVD+ G W M +++G W +T +A P
Sbjct: 199 DQGAN-PFYFEVLIEFEDGDGDLNAVDLMEAGCG-WTPMVQNWGALWRYNSNTGKALKAP 256
Query: 220 LQFRVVVTGGYDGKWVWADGEVLPRRWTAGRVY 252
R+ G V V+P W G Y
Sbjct: 257 FSLRLTSDSGK----VLVANNVIPASWKPGVTY 285
>Os04g0552200 Beta-expansin 5
Length = 275
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 15/217 (6%)
Query: 52 GSCGYGSLAAS--FNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDEA 109
G+CGY S F+ +AA P+LF+ G GCG+C+Q++C + CS VV+TD
Sbjct: 64 GACGYQSAVGQRPFSS-MIAAGGPSLFKNGKGCGSCYQIKCTGNRACSGRPVTVVITDSC 122
Query: 110 RS----TNRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEE 165
+S +LR+ + ++YKRVPC +A N++ +V+
Sbjct: 123 PGGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFA--MNVAFKVDA 180
Query: 166 KSRPPRELSIRFLYQGGQTDIVAVDVATV-GSSNWKFMTRDYGPAWSTAQAPAGPLQ--F 222
S P L+I Y G D+ AV + G WK M + +G W PL F
Sbjct: 181 GSN-PYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWRLNSNTGKPLSPPF 239
Query: 223 RVVVTGGYDGKWVWADGEVLPRRWTAGRVYDAGVQIA 259
+ +T G GK + A+ V+P W AG Y + V A
Sbjct: 240 SIRLTSG-SGKVLVAN-NVIPSGWQAGLTYRSTVNYA 274
>Os10g0555900 Beta-expansin precursor
Length = 268
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 9/213 (4%)
Query: 50 NAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTD-E 108
+ G+CG+ + + + +F+ G GCG+C+Q+RC + CS V++TD
Sbjct: 61 DGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCVNHPACSGNPETVIITDMN 120
Query: 109 ARSTNRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSR 168
++ LS QLR +D+++KRVPC + G ++ VEE S
Sbjct: 121 YYPVSKYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKRVPCNF-PGLKVTFHVEEGSN 179
Query: 169 PPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYGPAW--STAQAPAGPLQFRVVV 226
P ++ Y+ G D+V VD+ S +W M +G W + P R+
Sbjct: 180 -PVYFAVLVEYEDGDGDVVQVDLMEANSQSWTPMRESWGSIWRLDSNHRLTAPFSLRIT- 237
Query: 227 TGGYDGKWVWADGEVLPRRWTAGRVYDAGVQIA 259
GK + A +V+P W VY + VQ +
Sbjct: 238 --NESGKQLVA-SQVIPANWAPMAVYRSFVQYS 267
>Os03g0102700 Beta-expansin precursor
Length = 327
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 19/222 (8%)
Query: 50 NAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTD-E 108
N G+CG+ ++ + + LF+ G GCG+C+Q+RC CS V++TD
Sbjct: 111 NGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITDMN 170
Query: 109 ARSTNRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSR 168
+ LS +LR +D++++RVPC+Y G ++ VE+ S
Sbjct: 171 YYPVSLYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQY-PGLTVTFHVEQGSN 229
Query: 169 PPRELSIRFLYQGGQTDIVAVDVATVGSSN----------WKFMTRDYGPAW--STAQAP 216
P ++I Y+ G D+V VD+ S W M +G W T
Sbjct: 230 -PVYMAILVEYENGDGDVVQVDLMESRYSTGGVDGTPTGVWTPMRESWGSIWRLDTNHPL 288
Query: 217 AGPLQFRVVVTGGYDGKWVWADGEVLPRRWTAGRVYDAGVQI 258
GP R+ GK + AD +V+P W VY + VQ
Sbjct: 289 QGPFSLRIT---NESGKTLIAD-QVIPADWQPNTVYSSIVQF 326
>Os05g0246300 Expansin/Lol pI family protein
Length = 264
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 16/217 (7%)
Query: 50 NAGSCGYGSLA--ASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTD 107
+ G+CGY + A F+ +AA SP++++ G+GCG+C+QV+C CS VV+TD
Sbjct: 54 DGGACGYQAAVDQAPFSS-MIAAGSPSIYKSGLGCGSCYQVKCSGNSACSGNPVTVVLTD 112
Query: 108 EARS----TNRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRV 163
E + LS QLR + ++Y RVPC + G L+ V
Sbjct: 113 ECPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNW-GGVMLTFAV 171
Query: 164 EEKSRPPRELSIRFLYQGGQTDIVAVDVATVGS-SNWKFMTRDYGPAW--STAQAPAGPL 220
+ S P ++ Y+ G D+ +D+ G+ + W M + +G W S A PL
Sbjct: 172 DAGSN-PSYFAVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWKLSAGAALQAPL 230
Query: 221 QFRVVVTGGYDGKWVWADGEVLPRRWTAGRVYDAGVQ 257
R+ + GK + A V+P W G Y + V
Sbjct: 231 SIRLTSS---SGKTLVAS-NVIPSGWKPGASYTSTVN 263
>Os10g0548600 Beta-expansin precursor
Length = 269
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 50 NAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTD-- 107
N G+CG ++ G ++ + +F+ G GCG+C++V+C+ CS V +TD
Sbjct: 62 NGGACGIKNVNLPPYNGMISCGNVPIFKDGRGCGSCYEVKCEQPAACSKQPVTVFITDMN 121
Query: 108 -EARSTNRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEK 166
E S D S +LR +D++++RV C+Y G+ ++ VE+
Sbjct: 122 YEPISAYHFD--FSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPGGQKVTFHVEKG 179
Query: 167 SRPPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYGPAW--STAQAPAGPLQFRV 224
S P L++ + D++ +D+ G W+ M +G W TA P RV
Sbjct: 180 SN-PNYLAVLVKFVADDGDVIQMDLQEAGLPAWRPMKLSWGAIWRMDTATPLKAPFSIRV 238
Query: 225 VVTGGYDGKWVWADGEVLPRRWTAGRVYDAGVQI 258
GK + A +V+P W +Y + VQ
Sbjct: 239 TTE---SGKSLIAK-DVIPVNWMPDAIYVSNVQF 268
>Os04g0552000 Expansin/Lol pI family protein
Length = 264
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 10/215 (4%)
Query: 50 NAGSCGY-GSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDE 108
+ G+CGY G++ + +AA SP++++ G+GCG+C+QV+C CS VV+TDE
Sbjct: 54 DGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSACSGNPVTVVLTDE 113
Query: 109 ARS----TNRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRVE 164
+ LS QLR + ++Y RVPC + G L+ V+
Sbjct: 114 CPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNW-GGVKLTFVVD 172
Query: 165 EKSRPPRELSIRFLYQGGQTDIVAVDVATVGS-SNWKFMTRDYGPAWSTAQAPAGPLQFR 223
S P ++ Y+ G D+ V++ G+ + W M + +G W A F
Sbjct: 173 VGSN-PNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNAGSALQAPFS 231
Query: 224 VVVTGGYDGKWVWADGEVLPRRWTAGRVYDAGVQI 258
+ +T GK + A V+P W G Y + V
Sbjct: 232 IRLTSS-SGKTLVAS-NVIPSGWKPGMSYISTVNF 264
>Os03g0102500 Similar to Beta-expansin precursor (Fragment)
Length = 276
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 11/211 (5%)
Query: 54 CGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTD-EARST 112
CG+ + G + + L++GG GCG+C++VRC CS V +TD
Sbjct: 71 CGFKKVNQYPFMGMTSCGNQPLYKGGKGCGSCYRVRCNRNPACSGNAQTVAITDMNYFPL 130
Query: 113 NRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSRPPRE 172
++ LS LR +DV++ RVPCE+ G + VEE S P
Sbjct: 131 SQYHFDLSGIAFGRLAKPGRADDLRRAGIIDVQFARVPCEF-PGLKVGFHVEEGSS-PVY 188
Query: 173 LSIRFLYQGGQTDIVAVDV--ATVGSSNWKFMTRDYGPAW--STAQAPAGPLQFRVVVTG 228
L++ Y+ G D+ VD+ A G W M +G W + P R+
Sbjct: 189 LAVLVEYENGDGDVAQVDLKEAGAGGGRWTPMRESWGSVWRLDSNHRLRAPFSIRIRSD- 247
Query: 229 GYDGKWVWADGEVLPRRWTAGRVYDAGVQIA 259
GK + A +V+P WT Y + VQ +
Sbjct: 248 --SGKTLVAP-DVIPLNWTPNTFYRSFVQYS 275
>Os10g0555700 Beta-expansin
Length = 261
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 90/217 (41%), Gaps = 14/217 (6%)
Query: 50 NAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTD-E 108
N G+CG+ + + + LF+ G GCGAC+Q+RC + CS V++TD
Sbjct: 50 NGGACGFKNTNQYPFMSMTSCGNEPLFQDGKGCGACYQIRCTNNPSCSGQPRTVIITDMN 109
Query: 109 ARSTNRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSR 168
R LS QLR +D++++RVPC Y G ++ VE S
Sbjct: 110 YYPVARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPC-YHRGLYVNFHVEAGSN 168
Query: 169 PPRELSIRFLYQGGQTDIVAVDVATVGSSN-----WKFMTRDYGPAW--STAQAPAGPLQ 221
P L++ + +V +DV S W M R +G W GP
Sbjct: 169 -PVYLAVLVEFANKDGTVVQLDVMESLPSGKPTRVWTPMRRSWGSIWRLDANHRLQGPFS 227
Query: 222 FRVVVTGGYDGKWVWADGEVLPRRWTAGRVYDAGVQI 258
R+V G+ V A +V+P W A Y + VQ
Sbjct: 228 LRMVSE---SGQTVIAH-QVIPANWRANTNYGSKVQF 260
>Os10g0555600 Beta-expansin precursor
Length = 275
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 15/219 (6%)
Query: 50 NAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTD-E 108
N G+CG+ ++ + + +F+ G GCG+C+Q+RC CS V++TD
Sbjct: 63 NGGACGFKNVNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCNKDPSCSGNIETVIITDMN 122
Query: 109 ARSTNRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSR 168
R LS +LR +D++++RVPC Y G ++ VEE S
Sbjct: 123 YYPVARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNY-PGLKINFHVEEGSN 181
Query: 169 PPRELSIRFLYQGGQTDIVAVDVATVGSSN------WKFMTRDYGPAW--STAQAPAGPL 220
P ++ Y+ D+V VD+ S+ W M +G W + P
Sbjct: 182 -PVYFAVLVEYEDLDGDVVQVDLMESKSAYGGATGVWTPMRESWGSIWRLDSNHRLQAPF 240
Query: 221 QFRVVVTGGYDGKWVWADGEVLPRRWTAGRVYDAGVQIA 259
R+ GK + A+ V+P W+ Y + VQ +
Sbjct: 241 SLRIRSD---SGKTLVAN-NVIPANWSPNSNYRSIVQFS 275
>Os10g0556100 beta-expansin EXPB4 [Oryza sativa (japonica cultivar-group)]
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 15/219 (6%)
Query: 50 NAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTD-E 108
N G+CG+ + + LF+ G GCG+C+++RC + CS V++TD
Sbjct: 74 NGGACGFKHTNQYPFMSMTSCGNQPLFKDGKGCGSCYKIRCTKDQSCSGRSETVIITDMN 133
Query: 109 ARSTNRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSR 168
LS +LR +D+E+ RVPCE+ G + VEE S
Sbjct: 134 YYPVAPFHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEF-PGLKIGFHVEEYSN 192
Query: 169 PPRELSIRFLYQGGQTDIVAVDVATVGSSN------WKFMTRDYGPAW--STAQAPAGPL 220
P ++ Y+ G D+V VD+ +++ W M +G W T P
Sbjct: 193 -PVYFAVLVEYEDGDGDVVQVDLMESKTAHGPPTGRWTPMRESWGSIWRLDTNHRLQAPF 251
Query: 221 QFRVVVTGGYDGKWVWADGEVLPRRWTAGRVYDAGVQIA 259
R+ GK + A+ V+P W Y + VQ +
Sbjct: 252 SIRIR---NESGKTLVAN-NVIPANWRPNTFYRSFVQYS 286
>Os03g0645000 Beta-expansin
Length = 313
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 24/206 (11%)
Query: 68 LAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDEARS-------------TNR 114
+AA SP ++ G GCG+C++V C + CS VV+TD+
Sbjct: 75 IAAGSPYIYDSGKGCGSCYRVVCAGNEACSGIPVTVVITDQGPGGPCLEELVDGQCMNEA 134
Query: 115 TDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSRPPRELS 174
+S QLR + ++Y RV CE+ G L+ V+ S P L+
Sbjct: 135 AHFDMSGTAFGAMARPGQADQLRGAGLLQIQYTRVECEW-TGVGLTFVVDSGSN-PNYLA 192
Query: 175 IRFLYQGGQTDIVAVDVATVG---SSNWKFMTRDYGPAW--STAQAPAGPLQFRVVVTGG 229
+ Y +D+ AVD+ +G S +W M + +G W ++ A GP R+ + G
Sbjct: 193 LLVEYDDNDSDLAAVDIMPIGAGASGSWIPMQQSWGAVWRLNSGSALQGPFSVRLTFSSG 252
Query: 230 YDGKWVWADGEVLPRRWTAGRVYDAG 255
++ +P W G Y G
Sbjct: 253 Q----MFVASNAIPAGWNPGMAYQPG 274
>Os02g0658600 Similar to Beta-expansin (Fragment)
Length = 273
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 50 NAGSCGY-GSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTD- 107
+ G+CGY G + +AA SP+++ G GCG+C+QV+C CS VV+TD
Sbjct: 55 DGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPSCSGKPVTVVLTDL 114
Query: 108 ---EARSTNRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRVE 164
A LS QLR + V+Y RVPC++ G +++ RV+
Sbjct: 115 CPGGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKW-QGVDIAFRVD 173
Query: 165 EKSRPPRELSIRFLYQGGQTDIVAVDV----ATVGSSNWKFMTRDYGPAWSTAQAPAGPL 220
S L++ + G D+ AVD+ + G +W M + +G W PA PL
Sbjct: 174 AGSN-QYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNSGPA-PL 231
Query: 221 Q--FRVVVTGGYDGKWVWADGEVLPRRWTAGRVY 252
Q + +T G V ++ V+P W G Y
Sbjct: 232 QAPMSIRLTSGSGRTLVASN--VIPAGWQPGGTY 263
>AK064012
Length = 459
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 15/206 (7%)
Query: 50 NAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTD-E 108
N G+CG+ + + LF+ G GCG+C+++RC + CS V++TD
Sbjct: 74 NGGACGFKHTNQYPFMSMTSCGNQPLFKDGKGCGSCYKIRCTKDQSCSGRSETVIITDMN 133
Query: 109 ARSTNRTDLVLSXXXXXXXXXXXXXXQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSR 168
LS +LR +D+E+ RVPCE+ G + VEE S
Sbjct: 134 YYPVAPFHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEF-PGLKIGFHVEEYSN 192
Query: 169 PPRELSIRFLYQGGQTDIVAVDVATVGSSN------WKFMTRDYGPAW--STAQAPAGPL 220
P ++ Y+ G D+V VD+ +++ W M +G W T P
Sbjct: 193 -PVYFAVLVEYEDGDGDVVQVDLMESKTAHGPPTGRWTPMRESWGSIWRLDTNHRLQAPF 251
Query: 221 QFRVVVTGGYDGKWVWADGEVLPRRW 246
R+ GK + A+ V+P W
Sbjct: 252 SIRIR---NESGKTLVAN-NVIPAYW 273
>Os07g0496250 Barwin-related endoglucanase domain containing protein
Length = 162
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 52 GSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDEARS 111
G+C YG+ A+ N G ++A S +L+R GVGCGAC+QVRC + CS G +V+TD S
Sbjct: 47 GACEYGAFGATLNNGDVSA-SASLYRDGVGCGACYQVRCTNPYYCSPNGVTIVITDSGAS 105
Query: 112 TNRTDLVLSXXXXXXXXXXXXX-XQLRTRRAVDVEYKR 148
+ TD +LS L T V +EY+R
Sbjct: 106 -DGTDFILSQHAFTRMAQSTDAGTALLTLGVVGIEYRR 142
>Os08g0561900 Similar to Alpha expansin 26
Length = 269
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 89/224 (39%), Gaps = 20/224 (8%)
Query: 41 GFRDSSIALNAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKL-CSTA 99
G RD S L+ G+CGY + G A S LF G GCGAC++V+C D C
Sbjct: 51 GGRDGSGTLD-GACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVG 109
Query: 100 GAKVVVT------DEARSTNRTDLVLSXXXXXXXXXXXXXXQLRTRRA--VDVEYKRVPC 151
A +VVT +N + Q+ +A V + Y+RVPC
Sbjct: 110 AAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPC 169
Query: 152 EYAAGRNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYGPAWS 211
G IR P L + GG D+ + V W + R++G W
Sbjct: 170 VKVGG----IRYTITGNPYFNL-VMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQ 224
Query: 212 TAQAPAG-PLQFRVVVTGGYDGKWVWADGEVLPRRWTAGRVYDA 254
T++ G L FR V+TG + W VLP W G Y A
Sbjct: 225 TSEVLTGESLTFR-VMTGDHRKATSW---HVLPPDWQFGVTYQA 264
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,181,173
Number of extensions: 391809
Number of successful extensions: 1069
Number of sequences better than 1.0e-10: 23
Number of HSP's gapped: 1042
Number of HSP's successfully gapped: 23
Length of query: 275
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 176
Effective length of database: 11,866,615
Effective search space: 2088524240
Effective search space used: 2088524240
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 155 (64.3 bits)