Os10g0555900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Beta-expansin precursor.
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Os10g0555900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Beta-expansin precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1696.18 | 1.94 | 8.79 | -15.5 | 2.42 | 6.66 | -0.547 | -19 | -2.69 | 5.82 | 26.65 | 1263 | -- | -- |
| 1786.6 | 1.97 | 8.22 | -10.8 | 2.52 | 4.4 | 0.991 | -- | -1.56 | 5.19 | 27.44 | 1275 | -- | -- |
| 1696.37 | 1.92 | 8.78 | -15.6 | 2.43 | 6.72 | -- | -19.9 | -2.61 | 5.78 | 26.88 | 1268 | -- | -- |
| 1776.51 | 1.96 | 8.2 | -11 | 2.54 | 4.48 | -- | -- | -1.63 | 5.4 | 27.24 | 1283 | -- | -- |
| 1993.74 | 2.08 | 8.86 | -15.6 | -- | 6.81 | -- | -18.6 | -2.77 | -- | 26.42 | 1283 | -- | -- |
| 2665.5 | 2.42 | 8.22 | -9.58 | 2.77 | -- | 0.538 | -- | -1.67 | 4.77 | -- | -- | -- | -- |
| 2666.25 | 2.42 | 8.22 | -9.58 | 2.77 | -- | -- | -- | -1.67 | 4.79 | -- | -- | -- | -- |
| 2056.99 | 2.11 | 8.29 | -11 | -- | 4.82 | -- | -- | -1.77 | -- | 26.47 | 1283 | -- | -- |
| 4845.07 | 3.24 | 7.95 | -- | 3.01 | 3.9 | -- | -- | -0.419 | 6.19 | 27.07 | 1095 | -- | -- |
| 3073.34 | 2.59 | 8.25 | -9.48 | -- | -- | -- | -- | -1.6 | -- | -- | -- | -- | -- |
| 5086.39 | 3.34 | 7.98 | -- | 2.6 | -- | -- | -- | -0.605 | 4.9 | -- | -- | -- | -- |
| 5015.94 | 3.3 | 7.87 | -- | -- | 2.88 | -- | -- | 0.0809 | -- | 30.45 | 1216 | -- | -- |
| 5443.23 | 3.44 | 8.01 | -- | -- | -- | -- | -- | -0.548 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1687.40 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 7 |
| 2 | 1687.80 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 14 |
| 3 | 1687.96 | wind | 7 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 5 | 1688.34 | wind | 7 | 43200 | < th | dose independent | rect. | 4 | 12 |
| 6 | 1689.18 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 14 | 1692.29 | wind | 5 | 43200 | > th | dose dependent | rect. | 4 | 13 |
| 60 | 1705.28 | wind | 5 | 43200 | > th | dose dependent | sin | 0 | NA |
| 64 | 1705.99 | wind | 7 | 43200 | > th | dose independent | sin | 2 | NA |
| 65 | 1706.41 | wind | 7 | 43200 | < th | dose independent | sin | 2 | NA |
| 101 | 1713.69 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 21 |
| 114 | 1716.14 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 17 |
| 117 | 1716.32 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 21 |
| 138 | 1720.66 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 12 |
| 153 | 1722.15 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 19 |
| 156 | 1722.45 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 19 |
| 188 | 1725.27 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 228 | 1727.44 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 22 |
| 271 | 1730.24 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 21 |
| 323 | 1732.71 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 4 |
| 366 | 1734.44 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 16 |
| 395 | 1736.14 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 21 |
| 449 | 1738.49 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 490 | 1739.84 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 22 |
| 496 | 1739.93 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 22 |
| 580 | 1742.62 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 586 | 1742.85 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 664 | 1745.85 | temperature | 25 | 1440 | > th | dose dependent | sin | 13 | NA |
| 691 | 1746.82 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 696 | 1746.92 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 18 |
| 819 | 1751.89 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 19 |
| 848 | 1753.19 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 871 | 1753.87 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 939 | 1756.37 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 23 |