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Os02g0658600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Beta-expansin (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.12 (0.0282) R2 : 0.324
β1 : -1.31 (0.103) R2dD : 0.248 R2D : 0.132
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.592 (0.0601) R2dN8 : 0.192 R2N8 : 0.0758
σ : 0.529
deviance : 128.01
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
108.7 0.49 7.07 -1.02 0.391 0.705 0.448 -0.629 -0.449 6.88 23.29 829 -- --
109.06 0.486 7.08 -1.11 0.391 0.824 0.375 -- -0.467 6.82 23 883 -- --
109.14 0.487 7.07 -1.04 0.4 0.735 -- -0.46 -0.456 6.89 23.08 869 -- --
109.37 0.487 7.08 -1.09 0.397 0.832 -- -- -0.469 6.86 22.91 892 -- --
116.91 0.504 7.08 -1.01 -- 0.808 -- -0.496 -0.43 -- 23.2 732 -- --
117.54 0.508 7.11 -1.32 0.438 -- 0.273 -- -0.598 7.45 -- -- -- --
117.74 0.508 7.11 -1.32 0.438 -- -- -- -0.599 7.55 -- -- -- --
117.07 0.504 7.09 -1.07 -- 0.909 -- -- -0.447 -- 23 736 -- --
114.25 0.498 7.03 -- 0.394 1.23 -- -- -0.24 7.9 19.62 39707 -- --
128.01 0.529 7.12 -1.31 -- -- -- -- -0.592 -- -- -- -- --
163.43 0.598 7.08 -- 0.427 -- -- -- -0.452 7.76 -- -- -- --
123.97 0.519 7.04 -- -- 1.22 -- -- -0.216 -- 19.1 46883 -- --
173.29 0.614 7.09 -- -- -- -- -- -0.446 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 98.68 temperature 10.0 10 > th dose dependent rect. 6 20
27 102.72 temperature 15.0 10 > th dose dependent rect. 6 10
33 103.17 temperature 25.0 90 < th dose independent rect. 2 15
40 103.82 temperature 25.0 90 < th dose independent rect. 2 11
47 104.05 temperature 15.0 10 > th dose dependent rect. 6 8
54 104.42 temperature 25.0 90 < th dose independent rect. 2 17
59 104.58 temperature 30.0 10 < th dose dependent rect. 2 15
67 104.76 temperature 25.0 90 < th dose independent rect. 2 20
73 104.93 temperature 15.0 90 > th dose independent rect. 5 22
82 105.12 temperature 25.0 90 > th dose independent sin 5 NA
93 105.27 temperature 30.0 10 < th dose dependent rect. 2 10
111 105.52 temperature 25.0 90 > th dose independent rect. 5 9
113 105.53 temperature 30.0 10 < th dose dependent rect. 2 21
116 105.58 radiation 20.0 14400 < th dose independent rect. 3 3
122 105.63 wind 5.0 10 < th dose dependent rect. 2 4
128 105.71 wind 3.0 10 < th dose independent rect. 2 4
129 105.71 wind 9.0 30 < th dose dependent rect. 16 14
136 105.81 temperature 20.0 270 > th dose dependent rect. 5 4
144 105.89 temperature 15.0 10 > th dose independent rect. 6 20
146 105.91 temperature 15.0 270 > th dose independent rect. 3 22
152 106.00 temperature 20.0 270 > th dose dependent rect. 4 6
166 106.13 temperature 25.0 10 > th dose dependent sin 7 NA
180 106.20 temperature 25.0 90 < th dose independent sin 4 NA
183 106.23 temperature 30.0 270 < th dose dependent rect. 24 11
188 106.26 temperature 15.0 10 > th dose dependent rect. 6 16
195 106.32 wind 7.0 10 < th dose independent rect. 6 10
203 106.36 temperature 15.0 720 > th dose dependent rect. 6 1
226 106.51 wind 5.0 90 < th dose dependent rect. 3 2
240 106.59 temperature 30.0 270 < th dose dependent rect. 24 13
248 106.63 wind 9.0 30 < th dose dependent rect. 14 16
260 106.69 precipitation 0.1 10 < th dose independent rect. 2 4
262 106.69 precipitation 0.1 10 < th dose dependent rect. 2 4
266 106.72 wind 7.0 10 < th dose independent rect. 6 8
291 106.83 wind 3.0 90 < th dose independent rect. 3 2
297 106.84 humidity 50.0 1440 < th dose dependent rect. 16 1
314 106.91 humidity 50.0 1440 < th dose independent rect. 16 1
329 106.97 precipitation 0.1 10 < th dose independent rect. 6 20
331 106.97 precipitation 0.1 10 < th dose dependent rect. 6 20
336 106.99 temperature 10.0 10 > th dose dependent sin 5 NA
352 107.06 wind 7.0 10 < th dose independent rect. 16 14
369 107.15 temperature 10.0 10 > th dose independent rect. 2 4
371 107.15 temperature 30.0 10 < th dose independent rect. 2 4
372 107.15 humidity 50.0 10 > th dose independent rect. 2 4
375 107.15 atmosphere 995.0 10 > th dose independent rect. 2 4
376 107.15 atmosphere 1010.0 10 < th dose independent rect. 2 4
378 107.15 radiation 20.0 10 < th dose independent rect. 2 4
405 107.21 precipitation 0.1 90 < th dose independent rect. 3 2
407 107.21 precipitation 0.1 90 < th dose dependent rect. 3 2
413 107.23 temperature 25.0 90 > th dose independent rect. 24 14
432 107.29 atmosphere 1010.0 30 < th dose independent rect. 6 20
448 107.33 radiation 10.0 4320 < th dose dependent rect. 3 2
479 107.41 temperature 25.0 90 < th dose independent sin 6 NA
481 107.41 wind 9.0 43200 < th dose independent rect. 24 3
483 107.41 wind 7.0 10 < th dose independent rect. 6 20
485 107.41 radiation 40.0 10 < th dose dependent rect. 2 4
490 107.44 radiation 1.0 10 > th dose independent rect. 6 10
498 107.45 temperature 10.0 270 > th dose dependent rect. 20 13
500 107.46 temperature 20.0 10 > th dose dependent rect. 6 6
503 107.47 humidity 50.0 90 > th dose dependent rect. 3 2
519 107.50 humidity 50.0 10 > th dose dependent rect. 2 4
533 107.54 wind 9.0 1440 < th dose independent rect. 3 4
534 107.54 temperature 10.0 1440 > th dose independent rect. 3 4
537 107.54 temperature 30.0 1440 < th dose independent rect. 3 4
542 107.54 humidity 50.0 1440 > th dose independent rect. 3 4
547 107.54 atmosphere 995.0 1440 > th dose independent rect. 3 4
548 107.54 radiation 40.0 1440 < th dose independent rect. 3 4
555 107.54 temperature 10.0 1440 > th dose independent rect. 7 20
568 107.56 temperature 10.0 90 > th dose independent rect. 3 2
570 107.56 temperature 30.0 90 < th dose independent rect. 3 2
571 107.56 humidity 50.0 90 > th dose independent rect. 3 2
574 107.56 atmosphere 995.0 90 > th dose independent rect. 3 2
575 107.56 atmosphere 1010.0 90 < th dose independent rect. 3 2
577 107.56 radiation 20.0 90 < th dose independent rect. 3 2
591 107.58 radiation 30.0 90 < th dose dependent rect. 3 2
594 107.59 wind 9.0 14400 < th dose independent rect. 7 3
603 107.62 radiation 1.0 90 < th dose independent rect. 3 2
607 107.62 temperature 10.0 10 > th dose dependent rect. 2 4
613 107.63 temperature 30.0 10 < th dose dependent sin 3 NA
620 107.65 wind 1.0 270 > th dose independent rect. 1 2
636 107.69 atmosphere 1015.0 1440 < th dose independent rect. 3 3
666 107.75 atmosphere 995.0 10 > th dose dependent rect. 2 4
669 107.77 temperature 30.0 90 < th dose dependent rect. 3 2
688 107.81 wind 9.0 10 < th dose dependent rect. 6 8
690 107.82 radiation 20.0 43200 < th dose independent rect. 18 12
697 107.83 wind 7.0 30 < th dose independent rect. 14 16
712 107.86 radiation 40.0 10 < th dose dependent rect. 14 16
715 107.87 atmosphere 995.0 10 > th dose independent rect. 16 14
743 107.95 wind 9.0 90 < th dose independent rect. 5 22
762 107.96 wind 9.0 10 < th dose dependent rect. 6 10
775 107.98 atmosphere 1005.0 10 > th dose independent rect. 2 4
777 107.98 precipitation 0.1 90 < th dose independent rect. 5 22
779 107.98 precipitation 0.1 90 < th dose dependent rect. 5 22
792 108.02 radiation 30.0 30 < th dose independent rect. 6 20
795 108.03 temperature 30.0 30 < th dose independent rect. 14 16
816 108.07 atmosphere 1010.0 30 < th dose independent rect. 6 8
865 108.18 temperature 25.0 90 > th dose independent rect. 24 11
866 108.18 wind 7.0 720 < th dose independent rect. 15 14
888 108.22 humidity 60.0 10 > th dose independent rect. 16 14
898 108.24 wind 9.0 270 < th dose dependent rect. 15 14
901 108.25 temperature 10.0 90 > th dose dependent rect. 3 2
909 108.27 atmosphere 1005.0 90 > th dose independent rect. 3 2
932 108.28 radiation 20.0 10 < th dose independent rect. 16 14
938 108.28 temperature 10.0 720 > th dose dependent rect. 22 9
967 108.30 atmosphere 995.0 90 > th dose dependent rect. 3 2
973 108.31 temperature 10.0 10 > th dose independent rect. 6 10
975 108.31 atmosphere 1015.0 10 < th dose independent rect. 6 10
976 108.31 precipitation 0.1 10 < th dose independent rect. 6 10
978 108.31 temperature 10.0 10 > th dose independent rect. 16 14
979 108.31 radiation 40.0 10 < th dose independent rect. 16 14
983 108.31 precipitation 0.1 10 < th dose dependent rect. 6 10
986 108.31 temperature 15.0 10 > th dose dependent rect. 17 23
987 108.32 radiation 1.0 90 < th dose dependent rect. 3 14