BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0182400 Os07g0182400|AK103483
(219 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0182400 AUX/IAA protein family protein 344 3e-95
Os03g0797800 AUX/IAA protein family protein 152 2e-37
Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) ... 151 4e-37
Os03g0633800 Similar to IAA6 (Fragment) 148 3e-36
Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) ... 131 4e-31
Os03g0742900 Aux /IAA protein 131 5e-31
Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) ... 130 1e-30
Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) ... 129 1e-30
Os06g0335500 AUX/IAA protein family protein 125 3e-29
Os01g0675700 Similar to Auxin-responsive protein IAA14 (Ind... 123 9e-29
Os05g0559400 Similar to IAA11 (Fragment) 122 2e-28
Os06g0597000 Similar to Auxin responsive protein IAA-Re 117 7e-27
Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) ... 115 2e-26
Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) ... 108 2e-24
Os09g0527700 Similar to Auxin-induced protein IAA4 106 2e-23
Os02g0817600 AUX/IAA protein family protein 103 7e-23
Os05g0523300 Similar to IAA8 (Fragment) 94 9e-20
Os02g0228900 Similar to Auxin-responsive protein IAA18 (Ind... 92 2e-19
Os01g0190300 Similar to Auxin-responsive protein IAA26 (Ind... 91 9e-19
Os01g0741900 Similar to Auxin-responsive protein IAA26 (Ind... 90 1e-18
Os08g0109400 AUX/IAA protein family protein 86 2e-17
Os06g0166500 Similar to Auxin-responsive protein IAA20 (Ind... 74 1e-13
Os02g0723400 AUX/IAA protein family protein 69 3e-12
>Os07g0182400 AUX/IAA protein family protein
Length = 219
Score = 344 bits (883), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 173/202 (85%), Positives = 173/202 (85%)
Query: 18 ETDADNLCLRLGPPGSSIXXXXXXGGADPAAKRSLGAKRSLESTDSMASGTGTSAAGDEH 77
ETDADNLCLRLGPPGSSI GGADPAAKRSLGAKRSLESTDSMASGTGTSAAGDEH
Sbjct: 18 ETDADNLCLRLGPPGSSITTTTTTGGADPAAKRSLGAKRSLESTDSMASGTGTSAAGDEH 77
Query: 78 DDDTAAPAKAQVVGWPPVRAYRRNTFHQXXXXXXXTXXXXXXXXXXXXXXXXLYVKVSMD 137
DDDTAAPAKAQVVGWPPVRAYRRNTFHQ T LYVKVSMD
Sbjct: 78 DDDTAAPAKAQVVGWPPVRAYRRNTFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMD 137
Query: 138 GAPYLRKVDLKMCKGYRELREALDLLFTKCFSATASDGCSDGQFAIAYEDKDGDLMLVGD 197
GAPYLRKVDLKMCKGYRELREALDLLFTKCFSATASDGCSDGQFAIAYEDKDGDLMLVGD
Sbjct: 138 GAPYLRKVDLKMCKGYRELREALDLLFTKCFSATASDGCSDGQFAIAYEDKDGDLMLVGD 197
Query: 198 VPWEMFISSCKKLRIMKGSEAR 219
VPWEMFISSCKKLRIMKGSEAR
Sbjct: 198 VPWEMFISSCKKLRIMKGSEAR 219
>Os03g0797800 AUX/IAA protein family protein
Length = 197
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 111/171 (64%), Gaps = 9/171 (5%)
Query: 55 KRSLEST-DSMASGTGT-SAAGDEHDDDTAAPA-KAQVVGWPPVRAYRRNTFHQXXXXXX 111
+RS ST S ASGT AG +D A+PA K QVVGWPPV +YRR+TF
Sbjct: 30 RRSASSTVKSEASGTACCGGAGARDVEDGASPASKVQVVGWPPVGSYRRSTFQSSSSSTA 89
Query: 112 XTXXXXXXXXXXXXXXXX---LYVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFTKCF 168
LYVKVSMDGAPYLRKVDL+M GYRELR+ALD LF CF
Sbjct: 90 AAAKGKGGGETDQGRKNKGGGLYVKVSMDGAPYLRKVDLRMYGGYRELRDALDALFG-CF 148
Query: 169 SATASDGCSDGQFAIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSEAR 219
SA AS S FA+AYEDKDGDLML GDVPW+MFISSCKKLRIM+GSEAR
Sbjct: 149 SADASA--SAAHFAVAYEDKDGDLMLAGDVPWDMFISSCKKLRIMRGSEAR 197
>Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 197
Score = 151 bits (381), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 115/201 (57%), Gaps = 26/201 (12%)
Query: 26 LRLGPPGSSIXXXXXXGGADPAAKRSLGAKRSLESTDSMASGTGTSAAGDEHDDDTAAPA 85
LRLG PG+ A P + G+KR+L + D+ AA A
Sbjct: 9 LRLGLPGTE------EEAAPPPSTPRAGSKRAL------------AGEPDQAKIKPAAAA 50
Query: 86 KAQVVGWPPVRAYRRNTFHQXXXXXXXTXXXXXXXXXXXXXXXX-----LYVKVSMDGAP 140
KAQVVGWPPVR+YR++ L+VKVSMDGAP
Sbjct: 51 KAQVVGWPPVRSYRKSCLQPTTTTTKSKPPPAAAAAETQQKEDVAGAGGLFVKVSMDGAP 110
Query: 141 YLRKVDLKMCKGYRELREALDLLFTKCFS--ATASDGCSDGQFAIAYEDKDGDLMLVGDV 198
YLRK+DLK+ KGYRELREAL+ +F CFS A A + FA+ YEDKDGDLMLVGDV
Sbjct: 111 YLRKIDLKVYKGYRELREALEAMFL-CFSGGAAADAAVNPSDFAVTYEDKDGDLMLVGDV 169
Query: 199 PWEMFISSCKKLRIMKGSEAR 219
P+EMFIS+CK+LRIMKGSEAR
Sbjct: 170 PFEMFISTCKRLRIMKGSEAR 190
>Os03g0633800 Similar to IAA6 (Fragment)
Length = 226
Score = 148 bits (373), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 97/156 (62%), Gaps = 21/156 (13%)
Query: 82 AAP--AKAQVVGWPPVRAYRRNTFHQXXXX-----------------XXXTXXXXXXXXX 122
AAP AKAQVVGWPPVR+YR++ F Q
Sbjct: 62 AAPPVAKAQVVGWPPVRSYRKSCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPAPAASS 121
Query: 123 XXXXXXXLYVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFTKCFSATASDGCSDGQFA 182
VKVSMDGAPYLRK+DL+M KGYRELREAL+ +F CFS A+DG + +FA
Sbjct: 122 AAAANGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFV-CFSG-AADGANPSEFA 179
Query: 183 IAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSEA 218
I Y+DKDGDLMLVGDVP++MF S+CKKLRIMK SEA
Sbjct: 180 ITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEA 215
>Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 277
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 86/146 (58%), Gaps = 14/146 (9%)
Query: 86 KAQVVGWPPVRAYRRNTFHQXXXXXXXTXXXXXXXXXXXXXXXXLYVKVSMDGAPYLRKV 145
KAQVVGWPPVR+YR+N +VKVSMDGAPYLRKV
Sbjct: 118 KAQVVGWPPVRSYRKNIL-AVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKV 176
Query: 146 DLKMCKGYRELREALDLLFT-----KCFS--------ATASDGCSDGQFAIAYEDKDGDL 192
DLKM K Y EL +AL+ +F+ C S + +D + ++ YEDKDGD
Sbjct: 177 DLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYEDKDGDW 236
Query: 193 MLVGDVPWEMFISSCKKLRIMKGSEA 218
MLVGDVPWEMF+ SCK+LRIMKGSEA
Sbjct: 237 MLVGDVPWEMFVESCKRLRIMKGSEA 262
>Os03g0742900 Aux /IAA protein
Length = 236
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 85/139 (61%), Gaps = 7/139 (5%)
Query: 86 KAQVVGWPPVRAYRRNTFH----QXXXXXXXTXXXXXXXXXXXXXXXXLYVKVSMDGAPY 141
KAQ VGWPPVR++RRN + +VKVSMDGAPY
Sbjct: 84 KAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPY 143
Query: 142 LRKVDLKMCKGYRELREALDLLFTKCFSATASD-GCSDGQFAIA-YEDKDGDLMLVGDVP 199
LRKVDLKM Y++L AL +F F+AT ++ +G A+ YEDKDGD MLVGDVP
Sbjct: 144 LRKVDLKMYNSYKDLSLALQKMFG-TFTATGNNMNEVNGSDAVTTYEDKDGDWMLVGDVP 202
Query: 200 WEMFISSCKKLRIMKGSEA 218
W+MF+ SCK+LRIMKGSEA
Sbjct: 203 WQMFVESCKRLRIMKGSEA 221
>Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 241
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 88/162 (54%), Gaps = 28/162 (17%)
Query: 66 SGTGTSAAGDEHDDDTAAPAKAQVVGWPPVRAYRRNTFHQXXXXXXXTXXXXXXXXXXXX 125
S + +S E D D KAQVVGWPPVR++R+N +
Sbjct: 78 SASQSSVVTAEPDPDKPRAPKAQVVGWPPVRSFRKNVLAEKCKAAA-------------- 123
Query: 126 XXXXLYVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFT-----KCFSATASDGCS--- 177
VKVSMDGAPYLRK+D+ M K Y EL A +FT KC S +
Sbjct: 124 -----LVKVSMDGAPYLRKIDVAMYKSYPELSMAFQNMFTSFTIGKCGSHQQLKESNKLR 178
Query: 178 -DGQFAIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSEA 218
D ++ YEDKDGD MLVGDVPWEMF+ SCK+LRIMKGSEA
Sbjct: 179 DDLEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEA 220
>Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 263
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 82/132 (62%), Gaps = 9/132 (6%)
Query: 89 VVGWPPVRAYRRNTFHQXXXXXXXTXXXXXXXXXXXXXXXXLYVKVSMDGAPYLRKVDLK 148
VVGWPP+R+YR+NT LYVKVSMDGAPYLRKVDLK
Sbjct: 124 VVGWPPIRSYRKNTM------ATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLK 177
Query: 149 MCKGYRELREALDLLFTKCFSA--TASDGCSDGQFAIAYEDKDGDLMLVGDVPWEMFISS 206
K Y+++ L+ +F FS ++ DG++ + YEDKDGD MLVGDVPWEMF S
Sbjct: 178 TYKNYKDMSLGLEKMFI-GFSTGKEGAENQKDGEYVLTYEDKDGDWMLVGDVPWEMFTDS 236
Query: 207 CKKLRIMKGSEA 218
C++LRIMKGS+A
Sbjct: 237 CRRLRIMKGSDA 248
>Os06g0335500 AUX/IAA protein family protein
Length = 266
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 84/147 (57%), Gaps = 21/147 (14%)
Query: 89 VVGWPPVRAYRRNTFHQXXXXXXXTXXXXXXXXXXXXXXXXLYVKVSMDGAPYLRKVDLK 148
VVGWPP+R+YR+NT LYVKVSMDGAPYLRKVDLK
Sbjct: 109 VVGWPPIRSYRKNTMAMSQPA---LKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLK 165
Query: 149 MCKGYRELREALDLLFTKCFSA--------TASDGCSD---------GQFAIAYEDKDGD 191
M K Y+EL AL+ +F+ CF+ + DG SD + + YEDKD D
Sbjct: 166 MYKNYKELSLALEKMFS-CFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDED 224
Query: 192 LMLVGDVPWEMFISSCKKLRIMKGSEA 218
MLVGDVPW MF SC++LRIMKGS+A
Sbjct: 225 WMLVGDVPWRMFTDSCRRLRIMKGSDA 251
>Os01g0675700 Similar to Auxin-responsive protein IAA14 (Indoleacetic
acid-induced protein 14) (SOLITARY-ROOT protein)
Length = 271
Score = 123 bits (309), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 84/148 (56%), Gaps = 25/148 (16%)
Query: 88 QVVGWPPVRAYRRNTFHQXXXXXXXTXXXXXXXXXXXXXXXXLYVKVSMDGAPYLRKVDL 147
QVVGWPPVR YR+NT + LYVKVSMDGAPYLRKVDL
Sbjct: 117 QVVGWPPVRNYRKNTL-------AASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDL 169
Query: 148 KMCKGYRELREALDLLFTKCF-----------------SATASDGCSDGQFAIAYEDKDG 190
KM Y +L AL+ +F+ CF + + +D D ++ + YEDKD
Sbjct: 170 KMYSSYEDLSMALEKMFS-CFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDA 228
Query: 191 DLMLVGDVPWEMFISSCKKLRIMKGSEA 218
D MLVGD+PW++F + C+KL+IM+GS+A
Sbjct: 229 DWMLVGDLPWDLFTTICRKLKIMRGSDA 256
>Os05g0559400 Similar to IAA11 (Fragment)
Length = 281
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 108/240 (45%), Gaps = 54/240 (22%)
Query: 23 NLCLRLGPPGSSIXXXXXXGGA--------DPAAKRSLGAKRSLESTDSMASGTGTSAAG 74
+L LRLG PGS PA GAKR DS+ G AA
Sbjct: 37 HLALRLGLPGSESPARAEAEAVVVDAALTLGPAPPPRGGAKRGF--VDSLDRSEGRRAAA 94
Query: 75 DEHDDDTAAPAKA-------------------QVVGWPPVRAYRRNTFHQXXXXXXXTXX 115
DD+ + QVVGWPPVR+YR+NT +
Sbjct: 95 TAGDDERGVREEEEEEKGLGEAAAGAPRAAKAQVVGWPPVRSYRKNTL-------AASAT 147
Query: 116 XXXXXXXXXXXXXXLYVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFTKCF------- 168
YVKVSMDGAPYLRKVDLK Y +L AL+ +F+ CF
Sbjct: 148 KTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLKTYSSYEDLSLALEKMFS-CFITGRSSS 206
Query: 169 ----------SATASDGCSDGQFAIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSEA 218
+ +D D ++ + YEDKD D MLVGD+PW++F +SC+KLRIM+GS+A
Sbjct: 207 HKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDA 266
>Os06g0597000 Similar to Auxin responsive protein IAA-Re
Length = 193
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 76/144 (52%), Gaps = 30/144 (20%)
Query: 86 KAQVVGWPPVRAYRRNTFHQXXXXXXXTXXXXXXXXXXXXXXXXLYVKVSMDGAPYLRKV 145
KA+ VGWPPVRAYRRN + VKV++DGAPYLRKV
Sbjct: 59 KARAVGWPPVRAYRRNALREDSARAK-------------------LVKVAVDGAPYLRKV 99
Query: 146 DLKMCKGYRELREALDLLFTKCFSATAS-----------DGCSDGQFAIAYEDKDGDLML 194
DL GY L AL +F C + D + ++ YEDKDGD ML
Sbjct: 100 DLAAHAGYAPLLRALHGMFASCLAVRGGGGGDGEGTKLVDLVTGAEYVPTYEDKDGDWML 159
Query: 195 VGDVPWEMFISSCKKLRIMKGSEA 218
VGDVPW+MF+ SCK++R+MK SEA
Sbjct: 160 VGDVPWKMFVESCKRIRLMKSSEA 183
>Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 212
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 79/141 (56%), Gaps = 23/141 (16%)
Query: 86 KAQVVGWPPVRAYRRNTFHQXXXXXXXTXXXXXXXXXXXXXXXXLYVKVSMDGAPYLRKV 145
KA+VVGWPPVRA+R+N +VKV++DGAPYLRKV
Sbjct: 79 KARVVGWPPVRAFRKNALAALAAASSSKAK---------------FVKVAVDGAPYLRKV 123
Query: 146 DLKMCKGYRELREALDLLFTKCFSATA--------SDGCSDGQFAIAYEDKDGDLMLVGD 197
DL+ +GY +L AL F F+ D S ++ YEDKDGD MLVGD
Sbjct: 124 DLEAYRGYDQLLAALQDKFFSHFTIRKLGNEEMKLVDAVSGNEYVPTYEDKDGDWMLVGD 183
Query: 198 VPWEMFISSCKKLRIMKGSEA 218
VPW+MF+ +C++LR+MK SEA
Sbjct: 184 VPWKMFVETCQRLRLMKSSEA 204
>Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 199
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 76/139 (54%), Gaps = 32/139 (23%)
Query: 88 QVVGWPPVRAYRRNTFHQXXXXXXXTXXXXXXXXXXXXXXXXLYVKVSMDGAPYLRKVDL 147
+VVGWPPVR++R+N +VKV++DGAPYLRKVDL
Sbjct: 76 RVVGWPPVRSFRKNALAAK------------------------FVKVAVDGAPYLRKVDL 111
Query: 148 KMCKGYRELREALDLLFTKCFSA--------TASDGCSDGQFAIAYEDKDGDLMLVGDVP 199
+ GY +L AL F F+ D + ++ YEDKDGD MLVGDVP
Sbjct: 112 EAYSGYDQLLRALQDKFFSHFTIRKFADDERKLVDAVNGTEYVPTYEDKDGDWMLVGDVP 171
Query: 200 WEMFISSCKKLRIMKGSEA 218
W+MF+ +C++LR+MK SEA
Sbjct: 172 WKMFVETCQRLRLMKSSEA 190
>Os09g0527700 Similar to Auxin-induced protein IAA4
Length = 140
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 131 YVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFTKCFSATASDGCSDGQFAIAYEDKDG 190
+VKVSMDG PYLRKVD+ Y EL EAL+ +F C + DG + + A+ YED DG
Sbjct: 47 FVKVSMDGTPYLRKVDVAAYGDYLELVEALNDMF-YCSTIGLMDGYGEWEHAVVYEDGDG 105
Query: 191 DLMLVGDVPWEMFISSCKKLRIMKGSEAR 219
D MLVGDVPWEMF+SSCK++R+M+ EAR
Sbjct: 106 DWMLVGDVPWEMFVSSCKRMRVMRACEAR 134
>Os02g0817600 AUX/IAA protein family protein
Length = 280
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 80/154 (51%), Gaps = 19/154 (12%)
Query: 84 PAKAQVVGWPPVRAYRRNT-FHQXXXXXXXTXXXXXXXXXXXXXXXXL----------YV 132
P VVGWPP+R +R N+ F+Q T +V
Sbjct: 106 PHSFGVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWV 165
Query: 133 KVSMDGAPYLRKVDLKMCKGYRELREALDLLFTK-----CFSATASDGC---SDGQFAIA 184
KV+MDG RKVDL + Y+ L AL+L+FTK C S + + ++ +
Sbjct: 166 KVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNSAEYQLT 225
Query: 185 YEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSEA 218
YED+DGD MLVGDVPWEMF+SS K+LRIM+ S+A
Sbjct: 226 YEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDA 259
>Os05g0523300 Similar to IAA8 (Fragment)
Length = 327
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 19/148 (12%)
Query: 89 VVGWPPVRAYRRN-TFHQXXXXXXXTXXXXXXXXXXXXXXXXLYVKVSMDGAPYLRKVDL 147
VVGWPP+R++RRN T VK++MDG P RKVDL
Sbjct: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDL 227
Query: 148 KMCKGYRELREALDLLFTKCFSATASDGCSD------------------GQFAIAYEDKD 189
++ Y++L A++ LF A C++ G + + YED D
Sbjct: 228 QIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDND 287
Query: 190 GDLMLVGDVPWEMFISSCKKLRIMKGSE 217
GD ML GD+PW++F+S+ K+LR+M+ SE
Sbjct: 288 GDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
>Os02g0228900 Similar to Auxin-responsive protein IAA18 (Indoleacetic
acid-induced protein 18)
Length = 300
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 71/147 (48%), Gaps = 20/147 (13%)
Query: 89 VVGWPPVRAYRRNTFHQXXXXXXXTXXXXXXXXXXXXXXXXLYVKVSMDGAPYLRKVDLK 148
VVGWPPVR +RRN ++K++MDG P RK+DL
Sbjct: 139 VVGWPPVRTFRRNL--ATSSKASLELQNGKKAAKAEEIKRAPFIKINMDGVPIGRKIDLN 196
Query: 149 MCKGYRELREALDLLFTKCFSA----------------TASDGCSD--GQFAIAYEDKDG 190
Y +L A+D LF +A A G D G++ + YED +G
Sbjct: 197 AFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDGTGEYTLVYEDYEG 256
Query: 191 DLMLVGDVPWEMFISSCKKLRIMKGSE 217
D +LVGDVPW MF+SS K+LR++K S+
Sbjct: 257 DKVLVGDVPWGMFVSSVKRLRVLKTSD 283
>Os01g0190300 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 238
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 19/145 (13%)
Query: 92 WPPVRAYRRNTFHQXXXXXXXTXXXXXXXXXXXXXXXX-------LYVKVSMDGAPYLRK 144
WPPVR++RRN ++VK++MDG P RK
Sbjct: 74 WPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEKGMFVKINMDGVPIGRK 133
Query: 145 VDLKMCKGYRELREALDLLFTKCFSATASDG------------CSDGQFAIAYEDKDGDL 192
VDL GY +L A+D LF +A ++ G++ + YED +GD
Sbjct: 134 VDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEADAAAAGEMVGGGEYTLVYEDDEGDR 193
Query: 193 MLVGDVPWEMFISSCKKLRIMKGSE 217
MLVGDVPW+MFI++ K+LR++K S+
Sbjct: 194 MLVGDVPWQMFIATAKRLRVLKSSD 218
>Os01g0741900 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 335
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 85 AKAQVVGWPPVRAYRRN-TFHQXXXXXXXTXXXXXXXXXXXXXXXXLYVKVSMDGAPYLR 143
A A VVGWPP+R++RRN VK++MDG P R
Sbjct: 172 AAAPVVGWPPIRSFRRNLASSSSSKHSPEPQNDNANAKVTLTCKKNPLVKINMDGIPIGR 231
Query: 144 KVDLKMCKGYRELREALDLLFTKCFSA--------TASDGCSD----------GQFAIAY 185
K+DL Y L A+ LF A A G D G++ + Y
Sbjct: 232 KIDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVY 291
Query: 186 EDKDGDLMLVGDVPWEMFISSCKKLRIMKGSE 217
ED +GD MLVGDVPW++F+S+ K+LR+++ SE
Sbjct: 292 EDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSE 323
>Os08g0109400 AUX/IAA protein family protein
Length = 246
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 74/154 (48%), Gaps = 19/154 (12%)
Query: 80 DTAAPAKAQVVGWPPVRAYRRNT----------FHQXXXXXXXTXXXXXXXXXXXXXXXX 129
+ A + AQ+VGWPPVRA+R+N
Sbjct: 84 ENRAASSAQLVGWPPVRAFRKNLSTPKPADADDLMNKVKLCSDEGHGSRCAAQERRSSST 143
Query: 130 LYVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFTKCFS---ATASDGC------SDGQ 180
++VKV+++G RK+DLK + Y L +AL +F S AT + S +
Sbjct: 144 MFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKR 203
Query: 181 FAIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMK 214
+ + YED +GD MLVGDVPWE+FI+S K+L I +
Sbjct: 204 YVLVYEDNEGDRMLVGDVPWELFIASVKRLYIAQ 237
>Os06g0166500 Similar to Auxin-responsive protein IAA20 (Indoleacetic
acid-induced protein 20)
Length = 183
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 58/128 (45%), Gaps = 21/128 (16%)
Query: 86 KAQVVGWPPVRAYRRNTFHQXXXXXXXTXXXXXXXXXXXXXXXXLYVKVSMDGAPYLRKV 145
+ ++VGWPPV+ R YVKV M+G RK+
Sbjct: 76 RRKLVGWPPVKCLHRRRDGGCGGG---------------------YVKVKMEGLAIGRKL 114
Query: 146 DLKMCKGYRELREALDLLFTKCFSATASDGCSDGQFAIAYEDKDGDLMLVGDVPWEMFIS 205
DL + Y EL + L L+F D +A+ YED +GD M VGDVPWE F
Sbjct: 115 DLSILGSYAELLDTLHLMFPSTNQEDGHDRRRRHPYAVTYEDGEGDWMQVGDVPWEAFAK 174
Query: 206 SCKKLRIM 213
S K+L+I+
Sbjct: 175 SVKRLKIL 182
>Os02g0723400 AUX/IAA protein family protein
Length = 205
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 130 LYVKVSMDGAPYLRKVDLKMCKGYRELREALDLLF------TKCFSATASDGCSDGQF-- 181
L+VKV M+G P RK+DL GY+ L L +F C A G +
Sbjct: 104 LFVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYHHCHRQFAVVGMKTNKVHH 163
Query: 182 AIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKG 215
+ YED++GD M+ GDVPWE+F++S K+LRI +
Sbjct: 164 VLTYEDQEGDWMMAGDVPWELFLTSVKRLRIARA 197
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.132 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,518,949
Number of extensions: 235354
Number of successful extensions: 1134
Number of sequences better than 1.0e-10: 24
Number of HSP's gapped: 1107
Number of HSP's successfully gapped: 24
Length of query: 219
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 122
Effective length of database: 11,971,043
Effective search space: 1460467246
Effective search space used: 1460467246
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 154 (63.9 bits)