BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0725300 Os06g0725300|AK072728
(313 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0725300 Expansin/Lol pI family protein 576 e-165
Os03g0132200 Expansin-like protein A 208 4e-54
Os10g0542400 Expansin/Lol pI family protein 196 2e-50
Os07g0475400 Similar to Expansin-like protein A (Fragment) 194 9e-50
Os03g0102700 Beta-expansin precursor 100 1e-21
Os02g0658800 Beta-expansin 97 1e-20
Os10g0555900 Beta-expansin precursor 97 2e-20
Os04g0552200 Beta-expansin 5 96 3e-20
Os05g0246300 Expansin/Lol pI family protein 96 3e-20
Os03g0106800 Beta-expansin precursor (Beta-expansin OsEXPB10) 95 5e-20
Os04g0552000 Expansin/Lol pI family protein 94 1e-19
Os02g0658600 Similar to Beta-expansin (Fragment) 94 2e-19
Os10g0555600 Beta-expansin precursor 92 5e-19
Os03g0106900 Beta-expansin precursor (Beta-expansin 1) 91 1e-18
Os03g0106500 Beta-expansin precursor (Beta-expansin 1) 91 1e-18
Os10g0556100 beta-expansin EXPB4 [Oryza sativa (japonica cu... 90 2e-18
Os10g0548600 Beta-expansin precursor 87 1e-17
AK064012 84 1e-16
Os03g0645000 Beta-expansin 84 2e-16
Os10g0555700 Beta-expansin 81 1e-15
Os03g0102500 Similar to Beta-expansin precursor (Fragment) 79 6e-15
Os04g0530100 Similar to Beta-expansin 1 precursor (AtEXPB1)... 66 4e-11
>Os06g0725300 Expansin/Lol pI family protein
Length = 313
Score = 576 bits (1484), Expect = e-165, Method: Compositional matrix adjust.
Identities = 284/313 (90%), Positives = 284/313 (90%)
Query: 1 MDDNGDVHFCHRXXXXXXXXXXXXXXXXXXXXHSCDWCTPRHSTVSILPTPTHAAHLTGG 60
MDDNGDVHFCHR HSCDWCTPRHSTVSILPTPTHAAHLTGG
Sbjct: 1 MDDNGDVHFCHRATAVVALLLLHLVVVANAAAHSCDWCTPRHSTVSILPTPTHAAHLTGG 60
Query: 61 ACGFGAAPMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMAKQPEQE 120
ACGFGAAPMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMAKQPEQE
Sbjct: 61 ACGFGAAPMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMAKQPEQE 120
Query: 121 GEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESRRLAVRV 180
GEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESRRLAVRV
Sbjct: 121 GEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESRRLAVRV 180
Query: 181 EEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRYMTRRDGAPGVWTTS 240
EEASRNPTHLAIRFLYQGGQTDIAAVEIAQANAT WRYMTRRDGAPGVWTTS
Sbjct: 181 EEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATPPSSSYYSSWRYMTRRDGAPGVWTTS 240
Query: 241 RAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVYDTGLRVTDVAVRSCSLSCAIQ 300
RAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVYDTGLRVTDVAVRSCSLSCAIQ
Sbjct: 241 RAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVYDTGLRVTDVAVRSCSLSCAIQ 300
Query: 301 DMDSDDGEEEELR 313
DMDSDDGEEEELR
Sbjct: 301 DMDSDDGEEEELR 313
>Os03g0132200 Expansin-like protein A
Length = 279
Score = 208 bits (529), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/263 (44%), Positives = 158/263 (60%), Gaps = 32/263 (12%)
Query: 35 CDWCTPRHSTVSILPTPTHAAHLTGGACGFGAAPMELN----VAAVTADLFRHGHACGAC 90
CD C R T + LT G+CG+G A N +AA L+R G CGAC
Sbjct: 36 CDRCVRRSRAAYY----TSSLTLTAGSCGYGTAAATFNGGGFLAAAGPALYRGGVGCGAC 91
Query: 91 YQLRCRDRRLCGEDGVKVVVADMAKQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSA 150
YQ+RC+D++LC G +VVV D A+ NRT ++ AFAAMA+ G++A
Sbjct: 92 YQVRCKDKKLCSNAGARVVVTDRART-------NRTG-----LVLSSPAFAAMARPGMAA 139
Query: 151 HELTRQRTLEVDFRRIPCEYRESRRLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQ 210
LT ++V+++R+PCEYR R L+VRV+E SR P L I FLYQGGQTDI AV++AQ
Sbjct: 140 -SLTELAAVDVEYKRVPCEYRH-RSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQ 197
Query: 211 ANATXXXXXXXXXWRYMTRRDGAPGVWTTSRAPVGPLRLRVVVTAGSGGKWLRSDGEVLP 270
++ W++MTR G W+ + AP GPL++R+VVT G GKW+ +D EVLP
Sbjct: 198 VGSSS--------WKFMTREHGPS--WSMANAPPGPLQMRLVVTGGYDGKWVWADREVLP 247
Query: 271 ADWRPGEVYDTGLRVTDVAVRSC 293
WR GEVYDTG+++TD+A C
Sbjct: 248 RRWRAGEVYDTGVQITDIAQEGC 270
>Os10g0542400 Expansin/Lol pI family protein
Length = 275
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/240 (45%), Positives = 150/240 (62%), Gaps = 25/240 (10%)
Query: 57 LTGGACGFGAAPMELN---VAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADM 113
L G+CG+G+ N +AA + LFR G CGAC+Q+RC+D +LC G KVVV D
Sbjct: 49 LNAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDE 108
Query: 114 AKQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRES 173
A+ NRT ++ A+AAMA+ G++A TR R ++V+++R+PCEY
Sbjct: 109 AR------STNRT-----DLVLSAAAYAAMARPGMAAQLRTR-RAVDVEYKRVPCEYAAG 156
Query: 174 RRLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRYMTRRDGA 233
R L++RVEE SR P L+IRFLYQGGQTDI AV++A ++ W++MTR G
Sbjct: 157 RNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVATVGSS--------NWKFMTRDYGP 208
Query: 234 PGVWTTSRAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVYDTGLRVTDVAVRSC 293
W+T++AP GPL+ RVVVT G GKW+ +DGEVLP W G VYD G+++ DVA C
Sbjct: 209 --AWSTAQAPAGPLQFRVVVTGGYDGKWVWADGEVLPRRWTAGRVYDAGVQIADVAQEGC 266
>Os07g0475400 Similar to Expansin-like protein A (Fragment)
Length = 276
Score = 194 bits (492), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 146/239 (61%), Gaps = 28/239 (11%)
Query: 66 AAPMELN---VAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMAKQPEQEGE 122
A MELN +AA R G CG C+Q+RCR+ +C GV+VV+ D +
Sbjct: 61 AMEMELNGGFLAAGGPRQHRGGLGCGRCFQMRCRNAEVCSNAGVRVVLTDFHRS------ 114
Query: 123 MNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESRRLAVRVEE 182
S F + AFA +AK G+ AH+L + L V++RRIPC+Y++ + L++ VEE
Sbjct: 115 ------NSTDFLLGGPAFAGLAKPGM-AHKLKKLDALSVEYRRIPCDYKD-KNLSILVEE 166
Query: 183 ASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRYMTRRDGAPGVWTTSRA 242
S+ P +L I+FLYQGGQTDI AV++AQ ++ WR+MTR G VW+ RA
Sbjct: 167 QSKRPNNLVIKFLYQGGQTDILAVDVAQVGSSD--------WRFMTRVYGP--VWSIDRA 216
Query: 243 PVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVYDTGLRVTDVAVRSCSLSCAIQD 301
P GPL+ R VVT G GKW+ +D EVLPA+W+PG+VYDTG R+ DVA SC L CA D
Sbjct: 217 PNGPLQFRAVVTGGYDGKWVWADREVLPANWQPGQVYDTGARIADVARESC-LDCATLD 274
>Os03g0102700 Beta-expansin precursor
Length = 327
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 22/229 (9%)
Query: 58 TGGACGF---GAAPMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMA 114
GGACGF P + LF+ G CG+CYQ+RC C V++ DM
Sbjct: 111 NGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITDMN 170
Query: 115 KQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESR 174
P F ++ AF AMAK + EL +++ FRR+PC+Y
Sbjct: 171 YYPVSL----------YHFDLSGTAFGAMAKDNRN-DELRHAGIIDIQFRRVPCQY-PGL 218
Query: 175 RLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRYMTRRDGAP 234
+ VE+ S NP ++AI Y+ G D+ V++ ++ + + R+
Sbjct: 219 TVTFHVEQGS-NPVYMAILVEYENGDGDVVQVDLMESRYSTGGVDGTPTGVWTPMRESWG 277
Query: 235 GVW--TTSRAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVYDT 281
+W T+ GP LR+ GK L +D +V+PADW+P VY +
Sbjct: 278 SIWRLDTNHPLQGPFSLRIT---NESGKTLIAD-QVIPADWQPNTVYSS 322
>Os02g0658800 Beta-expansin
Length = 292
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 59 GGACGF----GAAPMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMA 114
GGACG+ G P +AA + L++ G CGACY+++C C VV+ D
Sbjct: 82 GGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAACSGQPATVVITD-- 139
Query: 115 KQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESR 174
E G + G+ F ++ + AMAK G+ A +L L+V +RR+PC+Y
Sbjct: 140 ---ECPGGI--CLAGAAHFDMSGTSMGAMAKPGM-ADKLRAAGILQVQYRRVPCKY-SGV 192
Query: 175 RLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANA--TXXXXXXXXXWRYMTRRDG 232
+A RV++ + NP + + ++ G D+ AV++ +A T WRY +
Sbjct: 193 NIAFRVDQGA-NPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWGALWRYNSN--- 248
Query: 233 APGVWTTSRAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVY 279
T +A P LR+ + GK L ++ V+PA W+PG Y
Sbjct: 249 ------TGKALKAPFSLRLTSDS---GKVLVAN-NVIPASWKPGVTY 285
>Os10g0555900 Beta-expansin precursor
Length = 268
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 28/231 (12%)
Query: 59 GGACGF---GAAPMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMAK 115
GGACGF P + +F+ G CG+CYQ+RC + C + V++ DM
Sbjct: 62 GGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCVNHPACSGNPETVIITDMNY 121
Query: 116 QPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESRR 175
P + F ++ AF AMAK G + +L +++ F+R+PC + +
Sbjct: 122 YPVSK----------YHFDLSGTAFGAMAKPGQN-DQLRHAGIIDIQFKRVPCNF-PGLK 169
Query: 176 LAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRYMTRRDGAPG 235
+ VEE S NP + A+ Y+ G D+ V++ +AN+ W M G+
Sbjct: 170 VTFHVEEGS-NPVYFAVLVEYEDGDGDVVQVDLMEANS--------QSWTPMRESWGSIW 220
Query: 236 VWTTSRAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVYDTGLRVT 286
++ P LR +T SG + + S +V+PA+W P VY + ++ +
Sbjct: 221 RLDSNHRLTAPFSLR--ITNESGKQLVAS--QVIPANWAPMAVYRSFVQYS 267
>Os04g0552200 Beta-expansin 5
Length = 275
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 109/227 (48%), Gaps = 28/227 (12%)
Query: 59 GGACGFGAA----PMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMA 114
GGACG+ +A P +AA LF++G CG+CYQ++C R C V VV+ D
Sbjct: 63 GGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGNRACSGRPVTVVITDSC 122
Query: 115 KQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESR 174
E + F ++ AF AMA +G+ L L++ ++R+PC R +
Sbjct: 123 PGGVCLNE-------AAHFDMSGTAFGAMANRGM-GDRLRSAGVLKIQYKRVPC--RFAM 172
Query: 175 RLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRYMTRRDGAP 234
+A +V+ S NP +LAI Y G D+AAV I +A W+ M + GA
Sbjct: 173 NVAFKVDAGS-NPYYLAILVQYANGDGDLAAVHIMEARG-------GGGWKAMQQSWGA- 223
Query: 235 GVWTTSRAPVGPLR--LRVVVTAGSGGKWLRSDGEVLPADWRPGEVY 279
W + PL + +T+GS GK L ++ V+P+ W+ G Y
Sbjct: 224 -TWRLNSNTGKPLSPPFSIRLTSGS-GKVLVAN-NVIPSGWQAGLTY 267
>Os05g0246300 Expansin/Lol pI family protein
Length = 264
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 59 GGACGFGAA----PMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMA 114
GGACG+ AA P +AA + +++ G CG+CYQ++C C + V VV+ D
Sbjct: 55 GGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSACSGNPVTVVLTDEC 114
Query: 115 KQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESR 174
E + F ++ AF AMA G A +L L++ + R+PC +
Sbjct: 115 PGGPCLSE-------PVHFDLSGTAFGAMANPG-QADQLRAAGVLQIQYNRVPCNW--GG 164
Query: 175 RLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRYMTRRDGAP 234
+ +A NP++ A+ Y+ G D++ +++ Q A W M + GA
Sbjct: 165 VMLTFAVDAGSNPSYFAVLVKYENGDGDLSGMDLMQTGA-------GAAWTPMQQSWGA- 216
Query: 235 GVWTTSRAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVYDT 281
VW S L + +T+ SG + S+ V+P+ W+PG Y +
Sbjct: 217 -VWKLSAGAALQAPLSIRLTSSSGKTLVASN--VIPSGWKPGASYTS 260
>Os03g0106800 Beta-expansin precursor (Beta-expansin OsEXPB10)
Length = 267
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 31/233 (13%)
Query: 58 TGGACGFG---AAPMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMA 114
GGACG+ AP + +F+ G CG+C++++C C + V + + DM
Sbjct: 60 NGGACGYKDIDKAPFLGMNSCGNDPIFKDGKGCGSCFEVKCSKPEACSDKPVIIHITDMN 119
Query: 115 KQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESR 174
+P + F ++ AF AMAK+G EL + +++ FRR+ C+Y
Sbjct: 120 TEPI----------AAYHFDLSGHAFGAMAKEG-KDEELRKAGIIDMQFRRVRCKYPGET 168
Query: 175 RLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRYMTRRDGAP 234
++ VE+ S NP + A+ Y GG D+ VE+ + + W+ + GA
Sbjct: 169 KVTFHVEKGS-NPNYFAVLVKYVGGDGDVVKVELKEKGSE--------EWKPLNESWGA- 218
Query: 235 GVW--TTSRAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVYDTGLRV 285
+W T + GP LR VT S K + +D V+P +W+ +Y + ++V
Sbjct: 219 -IWRIDTPKPLKGPFSLR--VTTESDQKLVAND--VIPDNWKANALYKSEIQV 266
>Os04g0552000 Expansin/Lol pI family protein
Length = 264
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 25/225 (11%)
Query: 59 GGACGF-GA---APMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMA 114
GGACG+ GA AP +AA + +++ G CG+CYQ++C C + V VV+ D
Sbjct: 55 GGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSACSGNPVTVVLTDEC 114
Query: 115 KQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESR 174
E + F ++ AF AMA G A +L L++ + R+PC + +
Sbjct: 115 PGGPCLSE-------PVHFDLSGTAFGAMANPG-QADQLRAAGVLQIQYNRVPCNWGGVK 166
Query: 175 RLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRYMTRRDGAP 234
V + NP + A+ Y+ G D++ VE+ Q A W M + GA
Sbjct: 167 L--TFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGA-------GAAWTQMQQSWGA- 216
Query: 235 GVWTTSRAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVY 279
VW + + +T+ SG + S+ V+P+ W+PG Y
Sbjct: 217 -VWKLNAGSALQAPFSIRLTSSSGKTLVASN--VIPSGWKPGMSY 258
>Os02g0658600 Similar to Beta-expansin (Fragment)
Length = 273
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 25/235 (10%)
Query: 51 PTHAAHLTGGACGF----GAAPMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGV 106
P + + GGACG+ G P +AA + ++ G CG+CYQ++C C V
Sbjct: 48 PANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPSCSGKPV 107
Query: 107 KVVVADMAKQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRI 166
VV+ D+ E + F ++ AF AMAK G +L L V + R+
Sbjct: 108 TVVLTDLCPGGACLEE-------PVHFDLSGTAFGAMAKPG-QDDQLRNAGKLPVQYARV 159
Query: 167 PCEYRESRRLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRY 226
PC++ + +A RV+ S N +LA+ + G D++AV++ Q+ + W
Sbjct: 160 PCKW-QGVDIAFRVDAGS-NQYYLAVLVEDEDGDGDLSAVDLMQSGGS----GGGGSWAA 213
Query: 227 MTRRDGAPGVWTTSRAPVGPLR--LRVVVTAGSGGKWLRSDGEVLPADWRPGEVY 279
M + GA VW + P PL+ + + +T+GSG + S+ V+PA W+PG Y
Sbjct: 214 MQQSWGA--VWKYNSGPA-PLQAPMSIRLTSGSGRTLVASN--VIPAGWQPGGTY 263
>Os10g0555600 Beta-expansin precursor
Length = 275
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 99/238 (41%), Gaps = 48/238 (20%)
Query: 58 TGGACGF---GAAPMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMA 114
GGACGF P + +F+ G CG+CYQ+RC C + V++ DM
Sbjct: 63 NGGACGFKNVNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCNKDPSCSGNIETVIITDMN 122
Query: 115 KQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESR 174
P F ++ AF AMAK G++ +L +++ FRR+PC Y
Sbjct: 123 YYPVAR----------YHFDLSGTAFGAMAKPGLN-DKLRHSGIIDIQFRRVPCNY-PGL 170
Query: 175 RLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRYMTRRDGAP 234
++ VEE S NP + A+ Y+ D+ V++ ++ + GA
Sbjct: 171 KINFHVEEGS-NPVYFAVLVEYEDLDGDVVQVDLMESKSA---------------YGGAT 214
Query: 235 GVWTTSRAPVG-------------PLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVY 279
GVWT R G P LR+ GK L ++ V+PA+W P Y
Sbjct: 215 GVWTPMRESWGSIWRLDSNHRLQAPFSLRI---RSDSGKTLVAN-NVIPANWSPNSNY 268
>Os03g0106900 Beta-expansin precursor (Beta-expansin 1)
Length = 267
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 31/232 (13%)
Query: 58 TGGACGFG---AAPMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMA 114
GGACG+ AP + +F+ G CG+C++++C C + + V DM
Sbjct: 60 NGGACGYKDVDKAPFLGMNSCGNDPIFKDGKGCGSCFEIKCSKPEACSDKPALIHVTDMN 119
Query: 115 KQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESR 174
+P + F ++ AF AMAK G EL + ++ FRR+ C+Y
Sbjct: 120 DEPI----------AAYHFDLSGLAFGAMAKDG-KDEELRKAGIIDTQFRRVKCKYPADT 168
Query: 175 RLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRYMTRRDGAP 234
++ +E+AS NP +LA+ Y G D+ VEI + + W+ + GA
Sbjct: 169 KITFHIEKAS-NPNYLALLVKYVAGDGDVVEVEIKEKGS--------EEWKALKESWGA- 218
Query: 235 GVW--TTSRAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVYDTGLR 284
+W T + GP +RV G K + D +P W+ VY + ++
Sbjct: 219 -IWRIDTPKPLKGPFSVRVTTEGGE--KIIAED--AIPDGWKADSVYKSNVQ 265
>Os03g0106500 Beta-expansin precursor (Beta-expansin 1)
Length = 267
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 31/232 (13%)
Query: 58 TGGACGFG---AAPMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMA 114
GGACG+ AP + +F+ G CG+C++++C C + + V DM
Sbjct: 60 NGGACGYKDVDKAPFLGMNSCGNDPIFKDGKGCGSCFEIKCSKPEACSDKPALIHVTDMN 119
Query: 115 KQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESR 174
+P + F ++ AF AMAK G EL + ++ FRR+ C+Y
Sbjct: 120 DEPI----------AAYHFDLSGLAFGAMAKDG-KDEELRKAGIIDTQFRRVKCKYPADT 168
Query: 175 RLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRYMTRRDGAP 234
++ +E+AS NP +LA+ Y G D+ VEI + + W+ + GA
Sbjct: 169 KITFHIEKAS-NPNYLALLVKYVAGDGDVVEVEIKEKGS--------EEWKALKESWGA- 218
Query: 235 GVW--TTSRAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVYDTGLR 284
+W T + GP +RV G K + D +P W+ VY + ++
Sbjct: 219 -IWRIDTPKPLKGPFSVRVTTEGGE--KIIAED--AIPDGWKADSVYKSNVQ 265
>Os10g0556100 beta-expansin EXPB4 [Oryza sativa (japonica cultivar-group)]
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 26/227 (11%)
Query: 58 TGGACGF---GAAPMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMA 114
GGACGF P + LF+ G CG+CY++RC + C V++ DM
Sbjct: 74 NGGACGFKHTNQYPFMSMTSCGNQPLFKDGKGCGSCYKIRCTKDQSCSGRSETVIITDMN 133
Query: 115 KQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESR 174
P F ++ AF +AK G++ +L ++++F R+PCE+
Sbjct: 134 YYPV----------APFHFDLSGTAFGRLAKPGLN-DKLRHSGIIDIEFTRVPCEF-PGL 181
Query: 175 RLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRYMTRRDGAP 234
++ VEE S NP + A+ Y+ G D+ V++ ++ R+ R+
Sbjct: 182 KIGFHVEEYS-NPVYFAVLVEYEDGDGDVVQVDLMESKTAHGPPTG----RWTPMRESWG 236
Query: 235 GVW--TTSRAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVY 279
+W T+ P +R+ GK L ++ V+PA+WRP Y
Sbjct: 237 SIWRLDTNHRLQAPFSIRI---RNESGKTLVAN-NVIPANWRPNTFY 279
>Os10g0548600 Beta-expansin precursor
Length = 269
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 31/232 (13%)
Query: 58 TGGACGF---GAAPMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMA 114
GGACG P ++ +F+ G CG+CY+++C C + V V + DM
Sbjct: 62 NGGACGIKNVNLPPYNGMISCGNVPIFKDGRGCGSCYEVKCEQPAACSKQPVTVFITDMN 121
Query: 115 KQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESR 174
+P + F + AF AMA G EL + +++ FRR+ C+Y +
Sbjct: 122 YEPIS----------AYHFDFSGKAFGAMACPG-KETELRKAGIIDMQFRRVRCKYPGGQ 170
Query: 175 RLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRYMTRRDGAP 234
++ VE+ S NP +LA+ + D+ +++ +A WR M GA
Sbjct: 171 KVTFHVEKGS-NPNYLAVLVKFVADDGDVIQMDLQEAGLP--------AWRPMKLSWGA- 220
Query: 235 GVWTTSRAPVGPLR--LRVVVTAGSGGKWLRSDGEVLPADWRPGEVYDTGLR 284
+W A PL+ + VT SG + D V+P +W P +Y + ++
Sbjct: 221 -IWRMDTA--TPLKAPFSIRVTTESGKSLIAKD--VIPVNWMPDAIYVSNVQ 267
>AK064012
Length = 459
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 58 TGGACGF---GAAPMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMA 114
GGACGF P + LF+ G CG+CY++RC + C V++ DM
Sbjct: 74 NGGACGFKHTNQYPFMSMTSCGNQPLFKDGKGCGSCYKIRCTKDQSCSGRSETVIITDMN 133
Query: 115 KQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESR 174
P F ++ AF +AK G++ +L ++++F R+PCE+
Sbjct: 134 YYPV----------APFHFDLSGTAFGRLAKPGLN-DKLRHSGIIDIEFTRVPCEF-PGL 181
Query: 175 RLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRYMTRRDGAP 234
++ VEE S NP + A+ Y+ G D+ V++ ++ R+ R+
Sbjct: 182 KIGFHVEEYS-NPVYFAVLVEYEDGDGDVVQVDLMESKTAHGPPTG----RWTPMRESWG 236
Query: 235 GVW--TTSRAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRP 275
+W T+ P +R+ GK L ++ V+PA WRP
Sbjct: 237 SIWRLDTNHRLQAPFSIRI---RNESGKTLVAN-NVIPAYWRP 275
>Os03g0645000 Beta-expansin
Length = 313
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 106/242 (43%), Gaps = 30/242 (12%)
Query: 53 HAAHLTGGACGFGAA----PMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKV 108
+ A GGACG+ A P +AA + ++ G CG+CY++ C C V V
Sbjct: 51 NGAGSEGGACGYQYAVDQPPFSSRIAAGSPYIYDSGKGCGSCYRVVCAGNEACSGIPVTV 110
Query: 109 VVADMAK-----QPEQEGE-MNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVD 162
V+ D + +G+ MN A F ++ AF AMA+ G A +L L++
Sbjct: 111 VITDQGPGGPCLEELVDGQCMNEAA----HFDMSGTAFGAMARPG-QADQLRGAGLLQIQ 165
Query: 163 FRRIPCEYRESRRLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXX 222
+ R+ CE+ L V+ S NP +LA+ Y +D+AAV+I A
Sbjct: 166 YTRVECEWT-GVGLTFVVDSGS-NPNYLALLVEYDDNDSDLAAVDIMPIGA-----GASG 218
Query: 223 XWRYMTRRDGAPGVW--TTSRAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVYD 280
W M + GA VW + A GP +R+ ++G + +PA W PG Y
Sbjct: 219 SWIPMQQSWGA--VWRLNSGSALQGPFSVRLTFSSGQ----MFVASNAIPAGWNPGMAYQ 272
Query: 281 TG 282
G
Sbjct: 273 PG 274
>Os10g0555700 Beta-expansin
Length = 261
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 25/232 (10%)
Query: 58 TGGACGF---GAAPMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMA 114
GGACGF P + LF+ G CGACYQ+RC + C V++ DM
Sbjct: 50 NGGACGFKNTNQYPFMSMTSCGNEPLFQDGKGCGACYQIRCTNNPSCSGQPRTVIITDMN 109
Query: 115 KQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESR 174
P F ++ AF AMA+ G++ +L +++ FRR+PC +R
Sbjct: 110 YYPVAR----------YHFDLSGTAFGAMARPGLN-DQLRHAGIIDIQFRRVPCYHRG-- 156
Query: 175 RLAVRVE-EASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRYMTRRDGA 233
L V EA NP +LA+ + + +++ + + W M R G+
Sbjct: 157 -LYVNFHVEAGSNPVYLAVLVEFANKDGTVVQLDVME---SLPSGKPTRVWTPMRRSWGS 212
Query: 234 PGVWTTSRAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVYDTGLRV 285
+ GP LR+V +G +V+PA+WR Y + ++
Sbjct: 213 IWRLDANHRLQGPFSLRMVSESGQ----TVIAHQVIPANWRANTNYGSKVQF 260
>Os03g0102500 Similar to Beta-expansin precursor (Fragment)
Length = 276
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 36/226 (15%)
Query: 62 CGFGAA---PMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMAKQPE 118
CGF P + L++ G CG+CY++RC C + V + DM P
Sbjct: 71 CGFKKVNQYPFMGMTSCGNQPLYKGGKGCGSCYRVRCNRNPACSGNAQTVAITDMNYFPL 130
Query: 119 QEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESRRLAV 178
+ F ++ AF +AK G A +L R ++V F R+PCE+ ++
Sbjct: 131 SQ----------YHFDLSGIAFGRLAKPG-RADDLRRAGIIDVQFARVPCEF-PGLKVGF 178
Query: 179 RVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATXXXXXXXXXWRYMTRRDGAPGVWT 238
VEE S +P +LA+ Y+ G D+A V++ +A A R+ R+ VW
Sbjct: 179 HVEEGS-SPVYLAVLVEYENGDGDVAQVDLKEAGAGGG--------RWTPMRESWGSVWR 229
Query: 239 TS-----RAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRPGEVY 279
RAP +R+R + SG + D V+P +W P Y
Sbjct: 230 LDSNHRLRAPFS-IRIR----SDSGKTLVAPD--VIPLNWTPNTFY 268
>Os04g0530100 Similar to Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)
(Ath-ExpBeta-1.5)
Length = 323
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
Query: 55 AHLTGGACGFGA----APMELNVAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVV 110
++ +GGACG+G+ PM+ V +V+ LF+ G CGACY+++C D +C V V+V
Sbjct: 42 SYFSGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKCLDHGICSRRAVTVIV 101
Query: 111 ADMAKQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRI 166
D E A G F ++ AF+ MA G H L + L V +R +
Sbjct: 102 TD-------ECPGGLCAFGRTHFDLSGAAFSRMAVAGAGGH-LRDRGQLSVVYRSV 149
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.134 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,100,124
Number of extensions: 451807
Number of successful extensions: 1282
Number of sequences better than 1.0e-10: 22
Number of HSP's gapped: 1235
Number of HSP's successfully gapped: 22
Length of query: 313
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 212
Effective length of database: 11,762,187
Effective search space: 2493583644
Effective search space used: 2493583644
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)