BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0183800 Os06g0183800|AY062186
(1335 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0183800 Similar to Chromatin remodeling factor CHD3 (G... 2526 0.0
Os07g0497000 Similar to Mi-2 autoantigen-like protein (Heli... 462 e-130
Os01g0881000 Zinc finger, FYVE/PHD-type domain containing p... 421 e-117
Os01g0367900 Similar to Possible global transcription activ... 397 e-110
Os05g0150300 Similar to Possible global transcription activ... 395 e-109
Os05g0144300 DEAD/DEAH box helicase, N-terminal domain cont... 374 e-103
Os03g0101700 Similar to SNF2P 306 6e-83
Os01g0102800 DEAD/DEAH box helicase, N-terminal domain cont... 275 2e-73
AK111184 221 3e-57
Os10g0457700 Zinc finger, FYVE/PHD-type domain containing p... 190 6e-48
Os04g0566100 Similar to Transcriptional activator SRCAP 180 8e-45
Os07g0660200 Similar to Chromodomain-helicase-DNA-binding p... 175 2e-43
Os02g0689800 DEAD/DEAH box helicase domain containing protein 161 3e-39
Os02g0762800 DEAD/DEAH box helicase, N-terminal domain cont... 150 8e-36
Os07g0636200 DEAD/DEAH box helicase, N-terminal domain cont... 132 1e-30
Os06g0255700 DEAD/DEAH box helicase, N-terminal domain cont... 122 1e-27
Os05g0247900 DEAD/DEAH box helicase, N-terminal domain cont... 121 3e-27
Os02g0650800 108 3e-23
Os07g0434500 DEAD/DEAH box helicase, N-terminal domain cont... 107 5e-23
Os05g0392400 SNF2-related domain containing protein 107 6e-23
Os02g0527100 DEAD/DEAH box helicase, N-terminal domain cont... 107 7e-23
Os01g0636700 RNA-binding region RNP-1 (RNA recognition moti... 103 9e-22
Os07g0642400 DEAD/DEAH box helicase, N-terminal domain cont... 99 3e-20
Os04g0177300 DEAD/DEAH box helicase, N-terminal domain cont... 96 1e-19
Os01g0779400 SWAP/Surp domain containing protein 96 2e-19
AK110250 92 3e-18
Os08g0180300 DEAD/DEAH box helicase, N-terminal domain cont... 91 5e-18
Os07g0511500 SNF2-related domain containing protein 89 2e-17
Os04g0629300 DEAD/DEAH box helicase, N-terminal domain cont... 87 1e-16
>Os06g0183800 Similar to Chromatin remodeling factor CHD3 (GYMNOS/PICKLE)
Length = 1335
Score = 2526 bits (6547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1228/1335 (91%), Positives = 1228/1335 (91%)
Query: 1 PPAARRGREGEGSAQRRPHRADRAGGRVIHLCVQKEDACQKCGENDNLVPCSTCTYAFHR 60
PPAARRGREGEGSAQRRPHRADRAGGRVIHLCVQKEDACQKCGENDNLVPCSTCTYAFHR
Sbjct: 1 PPAARRGREGEGSAQRRPHRADRAGGRVIHLCVQKEDACQKCGENDNLVPCSTCTYAFHR 60
Query: 61 KCLVPRLNITSDKWSCPECVSPLTEMEKILDCEETKPDAXXXXXXXXXXXXXXPVKRYLI 120
KCLVPRLNITSDKWSCPECVSPLTEMEKILDCEETKPDA PVKRYLI
Sbjct: 61 KCLVPRLNITSDKWSCPECVSPLTEMEKILDCEETKPDASEETSSSESGSKKKPVKRYLI 120
Query: 121 KWKGISHLHCTWVSESEYLETAKIYPRLKTRLNNFHKQMDSTDKSDDDYSAIRPEWTTVD 180
KWKGISHLHCTWVSESEYLETAKIYPRLKTRLNNFHKQMDSTDKSDDDYSAIRPEWTTVD
Sbjct: 121 KWKGISHLHCTWVSESEYLETAKIYPRLKTRLNNFHKQMDSTDKSDDDYSAIRPEWTTVD 180
Query: 181 RILATRKSSTGEREYYVKWKELTYDECTWENDSDIAVFQPQIERFNEIQSRRKKSTDKCK 240
RILATRKSSTGEREYYVKWKELTYDECTWENDSDIAVFQPQIERFNEIQSRRKKSTDKCK
Sbjct: 181 RILATRKSSTGEREYYVKWKELTYDECTWENDSDIAVFQPQIERFNEIQSRRKKSTDKCK 240
Query: 241 SVTREIRQYKESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIAFL 300
SVTREIRQYKESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIAFL
Sbjct: 241 SVTREIRQYKESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIAFL 300
Query: 301 GSLFVDKLGPHLVVAPLSTLRNWEREFATWAPQMNVVMYFGSAASREIIRXXXXXXXXXX 360
GSLFVDKLGPHLVVAPLSTLRNWEREFATWAPQMNVVMYFGSAASREIIR
Sbjct: 301 GSLFVDKLGPHLVVAPLSTLRNWEREFATWAPQMNVVMYFGSAASREIIRKYEFYYPKEK 360
Query: 361 XXXXXXXXXXXXXXDKKQSRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKD 420
DKKQSRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKD
Sbjct: 361 PKKLKKKKSSPSNEDKKQSRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKD 420
Query: 421 SKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEEFKDINQDKQ 480
SKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEEFKDINQDKQ
Sbjct: 421 SKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEEFKDINQDKQ 480
Query: 481 VEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSKQKEYYKAILTKNYEVLTRRSG 540
VEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSKQKEYYKAILTKNYEVLTRRSG
Sbjct: 481 VEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSKQKEYYKAILTKNYEVLTRRSG 540
Query: 541 GHVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRRLLESSGKMELLDKMMVKLKEQGH 600
GHVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRRLLESSGKMELLDKMMVKLKEQGH
Sbjct: 541 GHVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRRLLESSGKMELLDKMMVKLKEQGH 600
Query: 601 RVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTR 660
RVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTR
Sbjct: 601 RVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTR 660
Query: 661 AGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQL 720
AGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQL
Sbjct: 661 AGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQL 720
Query: 721 TKKKMVLEHLVVGRLTKGTNIVQEELDDIIRHGSKELFDDENDEAGKSCQIHYXXXXXXX 780
TKKKMVLEHLVVGRLTKGTNIVQEELDDIIRHGSKELFDDENDEAGKSCQIHY
Sbjct: 721 TKKKMVLEHLVVGRLTKGTNIVQEELDDIIRHGSKELFDDENDEAGKSCQIHYDDAAIDR 780
Query: 781 XXXXXXXXXXXXXXXXXXXXFLKGFKVANFEYIDXXXXXXXXXXXXXXXXXXXXXNSDRA 840
FLKGFKVANFEYID NSDRA
Sbjct: 781 LLDRDQADGEEPVEDEEEDEFLKGFKVANFEYIDEAKALAAKEEEARKKAEAEAANSDRA 840
Query: 841 NFWDKLLKDRYDVQKVEEHTTMGKGKRSRKQMAAADEDDITGLHXXXXXXXXXXXXXXXX 900
NFWDKLLKDRYDVQKVEEHTTMGKGKRSRKQMAAADEDDITGLH
Sbjct: 841 NFWDKLLKDRYDVQKVEEHTTMGKGKRSRKQMAAADEDDITGLHDMSSEDDDYSYDDDVS 900
Query: 901 XXXXXLQSGLAGRRGPYSKKKQRNVDSLPFMEGEGRALRVYGFNQIQRTQFLQTLMRYGF 960
LQSGLAGRRGPYSKKKQRNVDSLPFMEGEGRALRVYGFNQIQRTQFLQTLMRYGF
Sbjct: 901 DNDTSLQSGLAGRRGPYSKKKQRNVDSLPFMEGEGRALRVYGFNQIQRTQFLQTLMRYGF 960
Query: 961 QNYDWKEFTPRLKGKSVEEIQRYAELVMIHLLEDINDSGYYADGVPKEMRTDETLVRLAN 1020
QNYDWKEFTPRLKGKSVEEIQRYAELVMIHLLEDINDSGYYADGVPKEMRTDETLVRLAN
Sbjct: 961 QNYDWKEFTPRLKGKSVEEIQRYAELVMIHLLEDINDSGYYADGVPKEMRTDETLVRLAN 1020
Query: 1021 ISLVEEKVAAMEQGKITKLFPSYLLYEFPSLVGGRVWKAEQDLLLLKALIKHGYARWQYI 1080
ISLVEEKVAAMEQGKITKLFPSYLLYEFPSLVGGRVWKAEQDLLLLKALIKHGYARWQYI
Sbjct: 1021 ISLVEEKVAAMEQGKITKLFPSYLLYEFPSLVGGRVWKAEQDLLLLKALIKHGYARWQYI 1080
Query: 1081 SDDRDNGIFEAARQELRLPTANELISSHSNNETNGNLESTQEGQSNPTSMIHYRDTQRKI 1140
SDDRDNGIFEAARQELRLPTANELISSHSNNETNGNLESTQEGQSNPTSMIHYRDTQRKI
Sbjct: 1081 SDDRDNGIFEAARQELRLPTANELISSHSNNETNGNLESTQEGQSNPTSMIHYRDTQRKI 1140
Query: 1141 VEFIRKRYHLLERCLNLEYAVIKTKTPVPDDLAEQDFPGGHRPAVPDYSEMLRELPVLEP 1200
VEFIRKRYHLLERCLNLEYAVIKTKTPVPDDLAEQDFPGGHRPAVPDYSEMLRELPVLEP
Sbjct: 1141 VEFIRKRYHLLERCLNLEYAVIKTKTPVPDDLAEQDFPGGHRPAVPDYSEMLRELPVLEP 1200
Query: 1201 ISKEVAPEGTTDQSQVSHLYNKMCFVLEDSAVPALNSHFGDKAASSGLANSLHKFEAVCE 1260
ISKEVAPEGTTDQSQVSHLYNKMCFVLEDSAVPALNSHFGDKAASSGLANSLHKFEAVCE
Sbjct: 1201 ISKEVAPEGTTDQSQVSHLYNKMCFVLEDSAVPALNSHFGDKAASSGLANSLHKFEAVCE 1260
Query: 1261 DVSRILRSHENGTTPKEEVMLDASSKETTSPKDPATEVPSSASKEATPPVQDPVIEAVKE 1320
DVSRILRSHENGTTPKEEVMLDASSKETTSPKDPATEVPSSASKEATPPVQDPVIEAVKE
Sbjct: 1261 DVSRILRSHENGTTPKEEVMLDASSKETTSPKDPATEVPSSASKEATPPVQDPVIEAVKE 1320
Query: 1321 EPPTVKAEDKMEIDS 1335
EPPTVKAEDKMEIDS
Sbjct: 1321 EPPTVKAEDKMEIDS 1335
>Os07g0497000 Similar to Mi-2 autoantigen-like protein (Helicase-like protein)
Length = 622
Score = 462 bits (1189), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/494 (48%), Positives = 337/494 (68%), Gaps = 32/494 (6%)
Query: 287 EMGLGKTIQSIAFLGSLFVD-KLG-PHLVVAPLSTLRNWEREFATWAPQMNVVMYFGSAA 344
EMGLGKT+ + AFL SL + K+ P LV+ PLST+ NW EFA+WAP +NVV Y GSA
Sbjct: 1 EMGLGKTVSACAFLSSLCCEYKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSAR 60
Query: 345 SREIIRXXXXXXXXXXXXXXXXXXXXXXXXDKKQSRIKFDVLLTSYEMINMDSTVLKTIE 404
+R IIR K + KF+VLLT+YEM+ +D+ L+++
Sbjct: 61 ARSIIRQYEWHEGDASQM------------GKIKKSHKFNVLLTTYEMVLVDAAYLRSVS 108
Query: 405 WECMIVDEGHRLKNKDSKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEGDSFGS 464
WE +IVDEGHRLKN SKLF L +HRVLLTGTP+QNN+ E++ L++FL+ SF S
Sbjct: 109 WEVLIVDEGHRLKNSSSKLFSLLNTLSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPS 168
Query: 465 IADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSKQKEYY 524
+A +E+F D+ ++VE+L ++ PH+LRR KKD M+ +PPK E ++ VELTS Q EYY
Sbjct: 169 LASFEEKFNDLTTTEKVEELKNLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYY 228
Query: 525 KAILTKNYEVLTR--RSGGHVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRRL-LES 581
+A+LTKNY+VL + G H SL+N+VM+LRK+C H ++ E + S E L + +++
Sbjct: 229 RAMLTKNYQVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKA 288
Query: 582 SGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYR--KWSYERIDGKIGGAERQ 639
S K+ LL M+ L + GHRVLI+SQ +LD+LEDYL++ ++ER+DG + AERQ
Sbjct: 289 SAKLTLLHSMLKILHKDGHRVLIFSQMTKLLDILEDYLTWEFGPKTFERVDGSVSVAERQ 348
Query: 640 IRIDRFNAKNSTRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQT 699
I RFN ++ +RF FLLSTR+ GLGINLATADTVIIYDSD+NPHAD+QAM RAHR+GQ+
Sbjct: 349 AAIARFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS 407
Query: 700 SKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLTKGTNIVQEELDDIIRHGSKELF- 758
+++++YRLV R ++EER++ L KKK++L+ L V + Q+E++DIIR G++ELF
Sbjct: 408 NRLLVYRLVVRASVEERILHLAKKKLMLDQLFVNKSES-----QKEVEDIIRWGTEELFR 462
Query: 759 ------DDENDEAG 766
D N+ +G
Sbjct: 463 NSDVAVKDNNEASG 476
>Os01g0881000 Zinc finger, FYVE/PHD-type domain containing protein
Length = 1150
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 257/746 (34%), Positives = 404/746 (54%), Gaps = 78/746 (10%)
Query: 48 LVPC--STCTYAFHRKCLVPRLNITSDKWSCPEC---VSPLTEMEKILDCEETKPDAXXX 102
L+ C STC+ +FH CL P L W C C +P ++ ++L T
Sbjct: 316 LIKCKNSTCSRSFHTFCLDPPLQEIIGTWECSWCKSNAAPAVKVTEVL----TSKKIQRL 371
Query: 103 XXXXXXXXXXXPVKRYLIKWKGISHLHCTWVSESEYLETAKIYPRLKTRLNN--FHKQMD 160
++L+KW+ +SH H WV E+L + R+++ LN K++
Sbjct: 372 VGHRRILQEADFQYQFLVKWQSLSHHHDCWVP-LEWLHVSDPL-RVQSYLNKNCLPKEVY 429
Query: 161 STDKSDDDYSAIRPEWTTVDRILATRKSSTGE-----------------REYYVKWKELT 203
S D+ + EW VD +A R+ E E+ VKWK L
Sbjct: 430 SEDQR-------KLEWFEVDHAIACRRKFHHEGLCDVLATFQDNQDFDGYEFLVKWKGLD 482
Query: 204 YDECTWENDSDIAVFQPQIERFNEIQSRRKKSTDKCKSVTREIRQYKESPKFLSGGTLHP 263
Y E TWE +++ + RR K+ K ++++ + + + G L+
Sbjct: 483 YCEATWE-----PCCTDGVQQAVSMLVRRHKNASKRVNISQTCLDGSKIEE-VHCGALYD 536
Query: 264 YQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIAFLGSLFVDKL--GPHLVVAPLSTLR 321
YQL+GL +L ++ + VIL DEMGLGKT+Q + FL + + L P L++AP S L
Sbjct: 537 YQLQGLQWLIDNFKTRRSVILADEMGLGKTVQVVCFLYHIIKESLTASPALILAPKSILL 596
Query: 322 NWEREFATWAPQMNVVMYFGSAASREIIRXXXXXXXXXXXXXXXXXXXXXXXXDKKQSRI 381
WE+EF WA +NV++Y G SR+ I+ +
Sbjct: 597 QWEKEFCQWASDLNVIVYQGDRDSRKCIQVHEMY--------------------SSDGKP 636
Query: 382 KFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQLKEYHTKHRVLLTGT 441
FD L+TSYE + +D VL+ +W +++DE HR+K D L LK Y ++ R+LLTGT
Sbjct: 637 LFDALVTSYEFVQIDKAVLQKFKWSTIVIDEAHRMKKLDCNLAACLKRYCSEFRLLLTGT 696
Query: 442 PVQNNLDELFMLMHFLEGDSFG-----SIADLQEEFKDINQDKQVEKLHGMLKPHLLRRF 496
P+QNN+ ELF L+H+++ D F + E +D+ D++V ++H +LKP +LRR
Sbjct: 697 PLQNNIMELFSLLHYIDPDEFSDPKADGLFSPIESGRDLTMDEKVARIHNILKPRMLRRM 756
Query: 497 KKDVMKE-LPPKKELILRVELTSKQKEYYKAILTKNYEVLTR--RSGGHVSLINVVMELR 553
K DV+ + +P KK + + L Q+E Y IL +NY L R+G +SL N++MELR
Sbjct: 757 KSDVLTDSMPVKKWVEVPCALADSQRELYINILERNYSKLNSAIRNGRKLSLNNILMELR 816
Query: 554 KLCCHAFMTDEPEEPANSEEALRRLLESSGKMELLDKMMVKLKEQGHRVLIYSQFQHMLD 613
K C H + ++ +E+ L+ SSGK++LL K++ +LKE+G+RVLI+SQ MLD
Sbjct: 817 KCCNHPVGLEVGQQA--TEDVFLSLIASSGKLQLLHKLLPRLKERGNRVLIFSQMTRMLD 874
Query: 614 LLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLATADT 673
+LED+L + Y RIDG+ + RQ I+ + +S F FL+STRAGG+G++L AD
Sbjct: 875 ILEDFLCSLGYKYARIDGQTSLSARQESIEEYKNIDSETFIFLMSTRAGGMGVDLPGADR 934
Query: 674 VIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVG 733
VIIYD D+NP DLQA +RAHR+GQT V++Y+L+++ ++EE+++Q +K+K+ +E++++
Sbjct: 935 VIIYDPDFNPFMDLQAQSRAHRIGQTRPVVVYQLITKCSVEEKILQKSKQKLAIENMLMN 994
Query: 734 RLTKGTNIVQEELDDIIRHGSKELFD 759
K + +EL I+ HG+K + D
Sbjct: 995 SSKKPS---ADELQSILLHGAKTIVD 1017
>Os01g0367900 Similar to Possible global transcription activator SNF2L1 (SWI/SNF
related matrix associated actin dependent regulator of
chromatin subfamily A member 1)
Length = 1107
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/509 (44%), Positives = 316/509 (62%), Gaps = 37/509 (7%)
Query: 259 GTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIAFLGSL--FVDKLGPHLVVAP 316
G + YQL GLN+L + + IL DEMGLGKT+Q+I+ LG L F GPH+VVAP
Sbjct: 229 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAP 288
Query: 317 LSTLRNWEREFATWAPQMNVVMYFGSAASREIIRXXXXXXXXXXXXXXXXXXXXXXXXDK 376
STL NW +E + P + V + G+ R IR
Sbjct: 289 KSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLLQPG------------------- 329
Query: 377 KQSRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQLKEYHTKHRV 436
KFDV +TS+EM + T LK W +I+DE HR+KN++S L ++ Y+T +R+
Sbjct: 330 -----KFDVCVTSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRL 384
Query: 437 LLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEEFK---DINQDKQVEKLHGMLKPHLL 493
L+TGTP+QNNL EL+ L++FL + F S E F+ + +Q + V++LH +L+P LL
Sbjct: 385 LITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLL 444
Query: 494 RRFKKDVMKELPPKKELILRVELTSKQKEYYKAILTKNYEVLTRRSGGHVSLINVVMELR 553
RR K DV K LPPKKE IL+V ++ QK+YY+A+L K+ EV+ G L+N+ M+LR
Sbjct: 445 RRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVIN-AGGERKRLLNIAMQLR 503
Query: 554 KLCCHA--FMTDEPEEPANSEEALRRLLESSGKMELLDKMMVKLKEQGHRVLIYSQFQHM 611
K C H F EP P + E L+E++GKM LLDK++ KLK++ RVLI+SQ +
Sbjct: 504 KCCNHPYLFQGAEPGPPYTTGE---HLVENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRL 560
Query: 612 LDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLATA 671
LD+LEDYL YR + Y RIDG GG +R I+ FN S +F FLLSTRAGGLGINLATA
Sbjct: 561 LDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATA 620
Query: 672 DTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLV 731
D V++YDSDWNP ADLQA RAHR+GQ +V ++R + TIEE++++ KK+ L+ LV
Sbjct: 621 DVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALV 680
Query: 732 V--GRLTKGTNIVQEELDDIIRHGSKELF 758
+ GRL + + +++L ++R G++ +F
Sbjct: 681 IQQGRLAEQKTVNKDDLLQMVRFGAEMVF 709
>Os05g0150300 Similar to Possible global transcription activator SNF2L1 (SWI/SNF
related matrix associated actin dependent regulator of
chromatin subfamily A member 1)
Length = 1158
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/509 (44%), Positives = 314/509 (61%), Gaps = 37/509 (7%)
Query: 259 GTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIAFLGSL--FVDKLGPHLVVAP 316
G + YQL GLN+L + + IL DEMGLGKT+Q+I+ LG L F GPH+VVAP
Sbjct: 283 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAP 342
Query: 317 LSTLRNWEREFATWAPQMNVVMYFGSAASREIIRXXXXXXXXXXXXXXXXXXXXXXXXDK 376
STL NW +E + P + + + G+ R IR
Sbjct: 343 KSTLGNWMKEIQRFCPVLRAIKFLGNPEERNHIRENLLVPG------------------- 383
Query: 377 KQSRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQLKEYHTKHRV 436
KFDV +TS+EM + T LK W +I+DE HR+KN++S L ++ Y+T +R+
Sbjct: 384 -----KFDVCVTSFEMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRL 438
Query: 437 LLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEEFKDINQDKQ---VEKLHGMLKPHLL 493
L+TGTP+QNNL EL+ L++FL + F S + F+ ++ Q V++LH +L+P LL
Sbjct: 439 LITGTPLQNNLHELWSLLNFLLPEIFSSAETFDDWFQISGENDQHEVVQQLHKVLRPFLL 498
Query: 494 RRFKKDVMKELPPKKELILRVELTSKQKEYYKAILTKNYEVLTRRSGGHVSLINVVMELR 553
RR K DV K LPPKKE IL+V ++ QK+YY+A+L K+ EV+ G L+N+ M+LR
Sbjct: 499 RRLKSDVEKGLPPKKETILKVGMSEMQKQYYRALLQKDLEVVN-AGGERKRLLNIAMQLR 557
Query: 554 KLCCHA--FMTDEPEEPANSEEALRRLLESSGKMELLDKMMVKLKEQGHRVLIYSQFQHM 611
K C H F EP P + + L+E++GKM LLDK++ KLKE+ RVLI+SQ +
Sbjct: 558 KCCNHPYLFQGAEPGPPYTTGD---HLIENAGKMVLLDKLLPKLKERDSRVLIFSQMTRL 614
Query: 612 LDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLATA 671
LD+LEDYL Y+ + Y RIDG GG +R I+ FN S +F FLLSTRAGGLGINLATA
Sbjct: 615 LDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATA 674
Query: 672 DTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLV 731
D VI+YDSDWNP DLQA RAHR+GQ +V ++R + TIEE++++ KK+ L+ LV
Sbjct: 675 DVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALV 734
Query: 732 V--GRLTKGTNIVQEELDDIIRHGSKELF 758
+ GRL + + ++EL ++R G++ +F
Sbjct: 735 IQQGRLAEQKAVNKDELLQMVRFGAEMVF 763
>Os05g0144300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1128
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/527 (41%), Positives = 308/527 (58%), Gaps = 46/527 (8%)
Query: 251 ESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIAFLGSLFVDK--L 308
E P L GG L PYQLEGL ++ + +N IL DEMGLGKTIQ+IA + L K
Sbjct: 431 EQPSALEGGELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEKKEVT 490
Query: 309 GPHLVVAPLSTLRNWEREFATWAPQMNVVMYFGSAASREIIRXXXXXXXXXXXXXXXXXX 368
GPHL++AP + L NW EF TWAP + ++Y G R+ +R
Sbjct: 491 GPHLIIAPKAVLPNWSNEFKTWAPSIGTILYDGRPDDRKALR------------------ 532
Query: 369 XXXXXXDKKQSRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQL- 427
+K + +F+VLLT Y++I D LK + W +IVDEGHRLKN + L L
Sbjct: 533 ------EKNFGQRQFNVLLTHYDLILKDLKFLKKVHWHYLIVDEGHRLKNHECALARTLV 586
Query: 428 KEYHTKHRVLLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEEFK-------DINQDKQ 480
Y + R+LLTGTP+QN+L EL+ L++F+ + F S + +E F +N ++Q
Sbjct: 587 SRYQIRRRLLLTGTPIQNSLQELWSLLNFILPNIFNSSQNFEEWFNAPFACEVSLNDEEQ 646
Query: 481 ---VEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSKQKEYYKAILTKNYEVLTR 537
+ +LH +L+P LLRR K +V K LP K ++IL+ ++++ QK YY+ + T N V
Sbjct: 647 LLIIHRLHQVLRPFLLRRKKDEVEKYLPVKTQVILKCDMSAWQKAYYEQV-TSNGRVSLG 705
Query: 538 RSGGHVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRRLLESSGKMELLDKMMVKLKE 597
+L N+ M+LRK C H ++ E +E +R SSGK ELLD+++ KL+
Sbjct: 706 SGLKSKALQNLSMQLRKCCNHPYLFVEHYNMYQRQEIVR----SSGKFELLDRLLPKLQR 761
Query: 598 QGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLL 657
GHRVL++SQ +LD+LE YL ++ Y R+DG ER + FN K+S F FLL
Sbjct: 762 AGHRVLLFSQMTKLLDILEVYLQMYQFKYMRLDGSTKTEERGRLLADFNKKDSEYFLFLL 821
Query: 658 STRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERM 717
STRAGGLG+NL TADTVII+DSDWNP D QA RAHR+GQ ++V ++ LVS G+IEE +
Sbjct: 822 STRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKNEVRVFVLVSVGSIEEEI 881
Query: 718 MQLTKKKMVLEHLVV-GRLTKGTNIVQEE---LDDIIRHGSKELFDD 760
+ K+KM ++ V+ L T+ Q+ L +I+R G+ L D
Sbjct: 882 LDRAKQKMGIDAKVIQAGLFNTTSTAQDRRALLQEILRRGTSSLGTD 928
>Os03g0101700 Similar to SNF2P
Length = 842
Score = 306 bits (784), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 180/479 (37%), Positives = 267/479 (55%), Gaps = 48/479 (10%)
Query: 287 EMGLGKTIQSIAFLGSLFVDKL--GPHLVVAPLSTLRNWEREFATWAPQMNVVMYFGSAA 344
+MGLGKT+Q+I+ L L + + GP LV+ PLS W EF + P + V+ Y G
Sbjct: 16 QMGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNKFCPSLRVIQYVGDKL 75
Query: 345 SREIIRXXXXXXXXXXXXXXXXXXXXXXXXDKKQSRIKFDVLLTSYEMINMDSTVLKTIE 404
R +R + + FDV++T+Y++ MD L I
Sbjct: 76 HRRDLRRMMFQDVQKSSSS------------SHSTELPFDVMMTTYDIALMDQEFLSQIP 123
Query: 405 WECMIVDEGHRLKNKDSKLFGQLKE-YHTKHRVLLTGTPVQNNLDELFMLMHFLEGDSFG 463
W +++DE RLKN S L+ L++ + R+LLTGTP+QNNL EL+ LMHF FG
Sbjct: 124 WHYVVIDEAQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFG 183
Query: 464 SIADLQEEFK---------DINQ-DKQVEKLHGMLKPHLLRRFKKDVMKE----LPPKKE 509
++ FK + N+ DKQ + L +L+ +LRR K +++ LP E
Sbjct: 184 TLDQFLSTFKQSGDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALLIQSGILALPSLTE 243
Query: 510 LILRVELTSKQKEYYKAILTKNYEVLTRRSGG---HVSLINVVMELRKLCCHAFMTD--E 564
L + V LT QK+ Y ++L K + L +GG H SL N+V++LRK H ++ E
Sbjct: 244 LTVMVPLTPLQKKLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFSGIE 303
Query: 565 PEEPANSEEALRRLLESSGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKW 624
PE E L+++SGK+ +LD ++ KL E GHRVL+++Q LD+L+D+L R++
Sbjct: 304 PEPYVEGEH----LVQASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQY 359
Query: 625 SYERIDGKIGGAERQIRIDRFNAK----------NSTRFCFLLSTRAGGLGINLATADTV 674
+YER+DG + ER I F+++ S F F++STRAGG+G+NL ADTV
Sbjct: 360 TYERLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTV 419
Query: 675 IIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVG 733
I Y+ DWNP AD QA+ RAHR+GQ + V+ LVS+ TIEE +M+ ++K+ L H V+G
Sbjct: 420 IFYEQDWNPQADKQALQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIG 478
>Os01g0102800 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1187
Score = 275 bits (702), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 267/504 (52%), Gaps = 40/504 (7%)
Query: 261 LHPYQLEGLNFLRYSW-YHNKRV--ILGDEMGLGKTIQSIAFLGSLFVDKL-GPHLVVAP 316
L YQ G+ +L W H +R I+GDEMGLGKT+Q ++FLGSL L P +VV P
Sbjct: 372 LFDYQKVGVQWL---WELHCQRAGGIIGDEMGLGKTVQVLSFLGSLHNSGLYKPSIVVCP 428
Query: 317 LSTLRNWEREFATWAPQMNVVMYFGSAASREIIRXXXXXXXXXXXXXXXXXXXXXXXXDK 376
++ L+ W RE + W P+ V + SA S
Sbjct: 429 VTLLQQWRREASRWYPKFKVEILHDSANSSSKKSKRSSDSDSEASWDSDQEEAVTCSKPA 488
Query: 377 KQ-----SRI---KFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQLK 428
K+ SR+ +LLT+YE + + L IEW ++DEGHR++N ++++ K
Sbjct: 489 KKWDDLISRVVSSGSGLLLTTYEQLRILGEKLLDIEWGYAVLDEGHRIRNPNAEITLVCK 548
Query: 429 EYHTKHRVLLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEEFK--------DINQDKQ 480
+ T HR+++TG P+QN L EL+ L F+ G + + EF Q
Sbjct: 549 QLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYANATPLQ 608
Query: 481 VEK-------LHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSKQKEYYKAILTKNYE 533
V L ++ P+LLRR K DV +LP K E +L LT++Q+ Y+A L + E
Sbjct: 609 VSTAYRCAVVLRDLVMPYLLRRMKADVNAQLPKKTEHVLFCSLTTEQRATYRAFLASS-E 667
Query: 534 VLTRRSGGHVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRRLLESSGKMELLDKMMV 593
V G SL + + LRK+C H + + N + E SGKM+++++++
Sbjct: 668 VEQIFDGNRNSLYGIDV-LRKICNHPDLLEREHAAQNPDYGNP---ERSGKMKVVEQVLK 723
Query: 594 KLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRF 653
KEQGHRVL+++Q Q MLD++E++L+ ++ Y R+DG +R ID FN + F
Sbjct: 724 VWKEQGHRVLLFTQTQQMLDIMENFLTACEYQYRRMDGLTPAKQRMALIDEFNNTDEI-F 782
Query: 654 CFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTI 713
F+L+T+ GGLG NL A+ +IIYD DWNP D+QA RA R+GQT V +YRL++RGTI
Sbjct: 783 IFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQARERAWRIGQTRDVTVYRLITRGTI 842
Query: 714 EERMMQLTKKKMVLEHLVVGRLTK 737
EE++ + + +H + ++ K
Sbjct: 843 EEKVYH----RQIYKHFLTNKVLK 862
>AK111184
Length = 1028
Score = 221 bits (563), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 160/543 (29%), Positives = 259/543 (47%), Gaps = 80/543 (14%)
Query: 260 TLHPYQLEGLNFL--RYSWYH-----NKRVILGDEMGLGKTIQSIAFLGSLFVDK----- 307
L P+Q+EG+ FL R H + IL D+MGLGKT+Q+IA + +L
Sbjct: 323 ALRPHQIEGVKFLYERVMGMHADGEKGQGAILADKMGLGKTLQTIALVLTLLKQSCYYTP 382
Query: 308 ----LGPHLVVAPLSTLRNWEREFATW--APQMNVVMYFGSAASREIIRXXXXXXXXXXX 361
+ ++V PL+ ++NW+REF W +NV+ +++ R
Sbjct: 383 ASCTIERAIIVCPLTLVKNWKREFKKWIGTSALNVLCIDEGRGCQDVARFVRSK------ 436
Query: 362 XXXXXXXXXXXXXDKKQSRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKDS 421
+ VL+ YE + + K ++ DEGHRLK+K++
Sbjct: 437 --------------------SYHVLVIGYEKLRTCKDLFKDAPVGLIVCDEGHRLKSKEA 476
Query: 422 KLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEG---DSFGSIADLQEE------- 471
K E + +++L+GTP+QN+L E F ++ F+ +S+ S + EE
Sbjct: 477 KTTQMFDELSAERKIILSGTPIQNDLSEFFAMIDFVAPGMLNSYASFKKISEEPIMRSRA 536
Query: 472 -----FKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSKQKEYYKA 526
+ L + +LRR + LPPKKE++L + +Q Y++
Sbjct: 537 QHCSKHTKATGQARASALMTITNDIILRRTADILSNFLPPKKEMVLFCSPSPEQIRIYQS 596
Query: 527 ILTKN-YEVLTRRSGGHVSLINVVMELRKLC--CHAFMTDEPEEPANSEEAL-------- 575
IL N L R G+ L+ + + LRKLC + D + ++ +AL
Sbjct: 597 ILASNDVRSLLRGDAGN-GLLQIGV-LRKLCNTPELLLRDSEADGTSAIKALVGDMARYF 654
Query: 576 -----RRLLESSGKMELLDKMMVKLK-EQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERI 629
R SGK+ + +++ KL+ E +V++ S F LD++E + +++SY R+
Sbjct: 655 PPNFVRNDARFSGKLVCVMQLLEKLRAETDDKVVLVSNFTSTLDIVEAMMRKKRYSYLRL 714
Query: 630 DGKIGGAERQIRIDRFNAKN-STRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQ 688
DGK ER +++FN + F FLLS ++GG+G+NL A+ +++ DSDWNP DLQ
Sbjct: 715 DGKTPQDERMDMVNQFNRDGVDSSFVFLLSAKSGGVGLNLIGANRLVLIDSDWNPSTDLQ 774
Query: 689 AMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVL-EHLVVGRLTKGTNIVQEELD 747
AMAR HR GQ IYRL+ GT++E++ Q K+ L + L+ G + QEEL
Sbjct: 775 AMARIHRDGQKKVCYIYRLLLSGTMDEKIYQRQISKLGLTDSLIKGDKSSSDTFSQEELR 834
Query: 748 DII 750
DI
Sbjct: 835 DIF 837
>Os10g0457700 Zinc finger, FYVE/PHD-type domain containing protein
Length = 1319
Score = 190 bits (483), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 180/616 (29%), Positives = 269/616 (43%), Gaps = 142/616 (23%)
Query: 261 LHPYQLEGLNFLRYSWYHN-KRV---------ILGDEMGLGKTIQSIAFLGSLF-VDKLG 309
L P+Q+ G+ F+ + + K+V IL MGLGKT Q I FL ++ +LG
Sbjct: 715 LKPHQVSGIRFMWENVIQSVKKVKSGDKGFGCILAHNMGLGKTFQVITFLYTVMRCIQLG 774
Query: 310 --PHLVVAPLSTLRNWEREFATWAPQMN--VVMYFGSAASREIIRXXXXXXXXXXXXXXX 365
L+V P++ L NW++EF W P + + +Y R I+
Sbjct: 775 LRTALIVTPVNVLHNWKKEFIKWCPAESKPLRVYMLEDVPRANIQYLL------------ 822
Query: 366 XXXXXXXXXDKKQSRIKFDVLLTSYEMI-NM-------DSTVLKTI--EWEC----MIVD 411
K+ RIK VLL Y N+ D TV I +C ++ D
Sbjct: 823 -----------KKWRIKGGVLLIGYSSFRNLSLGRSARDKTVANEITNALQCGPDILVCD 871
Query: 412 EGHRLKNKDSKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEE 471
E H +KN+ + LK+ T+ R+ LTG+P+QNNL E + ++ F+ GS + +
Sbjct: 872 EAHIIKNRRADTTQALKQVRTQRRIALTGSPLQNNLMEYYCMVDFVREGYLGSSHEFRNR 931
Query: 472 FKD-----------------INQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRV 514
F++ +NQ + L+ LK + R V +LP KK ++ V
Sbjct: 932 FQNPIENGQHTNSTSDDVKIMNQRSHI--LYEQLKGFVQRMDMNVVKNDLPEKKVFVVTV 989
Query: 515 ELTSKQKEYYKAILTKN-------YEVLTRRSG------------GHVSLINVVME---L 552
+L+ Q++ Y+ L N E +RSG H L+ + + L
Sbjct: 990 KLSQLQRKLYRRFLDVNGFSSSAASEKSFQRSGFFAKYQTLALIWNHPGLLQMAKQKGNL 1049
Query: 553 RKLCCHAFMTDEPEEPANSE------EALR----------------------RLLES--- 581
R+ +F+ DE N E E LR LL+
Sbjct: 1050 RQEDVESFLMDESSSDDNIENYLPNGEKLRSRNDQLSKKSSDVVNEESNWWENLLDENAY 1109
Query: 582 -----SGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSY--------RKW---- 624
SGKM LL ++ E G + L++SQ LDL+E YLS + W
Sbjct: 1110 KEADYSGKMVLLLDILSSCSELGDKALVFSQSLSTLDLVEFYLSKLQVNGKEGKYWKQGK 1169
Query: 625 SYERIDGKIGGAERQIRIDRFNAKNSTRF-CFLLSTRAGGLGINLATADTVIIYDSDWNP 683
+ RIDG +ERQ ++RFN + R C L+STRAG +GINL +A+ VI+ D WNP
Sbjct: 1170 DWYRIDGSTPSSERQNLVERFNDPENIRVKCTLISTRAGYIGINLHSANRVILLDGSWNP 1229
Query: 684 HADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLTKGTNIVQ 743
DLQA+ R R GQT V YRL++ T+EE++ + K L VV R I +
Sbjct: 1230 THDLQAIYRVWRYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVDRQQVSRTISK 1289
Query: 744 EELDDIIRHGSKELFD 759
EE+ + G +EL +
Sbjct: 1290 EEMLHLFEFGDEELLE 1305
>Os04g0566100 Similar to Transcriptional activator SRCAP
Length = 914
Score = 180 bits (456), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 156/571 (27%), Positives = 246/571 (43%), Gaps = 147/571 (25%)
Query: 261 LHPYQLEGLNFLRYSWYHNKRV---ILGDEMGLGKTIQSIAFLGSL--FVDKLGPHLVVA 315
L PYQL G+NFL H K + IL DEMGLGKT+Q++ +L L + GPHL+V
Sbjct: 325 LKPYQLVGVNFLLL--LHRKNIGGAILADEMGLGKTVQAVTYLTLLRHLYNDPGPHLIVC 382
Query: 316 PLSTLRNWEREFATWAPQMNVVMYFG---SAASREIIRXXXXXXXXXXXXXXXXXXXXXX 372
P S L NWERE W P +++M+ G +A S+E+
Sbjct: 383 PASVLENWERELKKWCPSFSIIMFHGAGRTAYSKEL-----------------------S 419
Query: 373 XXDKKQSRIKFDVLLTSYEMINM-------DSTVLKTIEWECMIVDEGHRLKNKDSKLFG 425
K F+VLL Y + D LK W C+++DE H LK+K S +
Sbjct: 420 SLGKAGYPPPFNVLLVCYSLFERRSAQQKDDRKALKRWRWSCVLMDEAHVLKDKGSFRWR 479
Query: 426 QLKEY--HTKHRVLLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEEFKDINQDKQVEK 483
L H + R++LTGTP+QN+L EL+ L+ F+ D F + ++ + + + +
Sbjct: 480 NLMAVAQHARQRLMLTGTPLQNDLHELWSLLEFMMPDIFATGDIDLKKLLNAEDHELISR 539
Query: 484 LHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSKQ--------KEYYKAILTKNYEVL 535
+ +L P +LRR K DVM++L PK + + V + S+Q EY A ++ +
Sbjct: 540 IKSILGPFILRRLKSDVMQQLVPKIQHVNFVTMDSEQFQAYNYAIDEYRGACQARSAKST 599
Query: 536 TRRSGGHVSLI------NVVMELRKLCCH------------------------AFMTDEP 565
+ S V LI N M+ RK+ H AF +
Sbjct: 600 SNFSNNVVGLIPKRQISNYFMQFRKIANHPLLIRRIYSDKDVDRIAKLLYPKGAFGFECS 659
Query: 566 EEPANSEE------ALRRLLESSG-----------------KMELLDKMMVKLKEQGHRV 602
E A E A+ +LL S G K + L +++ L GHRV
Sbjct: 660 LERATQELRKYNDFAIHQLLVSYGDSGTKGALTDEHVLGSAKCQALAELLPSLANDGHRV 719
Query: 603 LIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTRAG 662
LI+SQ+ MLD+LE L +Y R+DG G + I L R
Sbjct: 720 LIFSQWTTMLDILEWTLEVIGVTYRRLDGGWIGKLKIAAI-------------ALDNRNL 766
Query: 663 GLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTK 722
L I+ + + I+ S W LV++G+++E + ++ +
Sbjct: 767 SLSID---CEHITIFISTW-------------------------LVTKGSVDENIYEIAR 798
Query: 723 KKMVLEHLVV---GRLTKGTNIVQEELDDII 750
+K+VL+ ++ L T++ ++ + +I+
Sbjct: 799 RKLVLDAAILQSGAELEDSTDVPEKTMGEIL 829
>Os07g0660200 Similar to Chromodomain-helicase-DNA-binding protein, CHD-1-related
Length = 604
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 218/507 (42%), Gaps = 98/507 (19%)
Query: 610 HMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLA 669
MLD+L +YLS R + ++R+DG R ++ FNA S FCFLLSTRAGGLGINLA
Sbjct: 3 RMLDILAEYLSLRGFQFQRLDGSTRADLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLA 62
Query: 670 TADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEH 729
TADTVII+DSDWNP DLQAM+RAHR+GQ V IYR V+ ++EE +++ KKKMVL+H
Sbjct: 63 TADTVIIFDSDWNPQNDLQAMSRAHRIGQQETVNIYRFVTCKSVEEDILERAKKKMVLDH 122
Query: 730 LVV------GRLTK------GTNIVQEELDDIIRHGSKELF-DDENDEAGKSCQIHYXXX 776
LV+ GRL K G+ + EL I+R G++ELF +D+ DE K
Sbjct: 123 LVIQKLNAEGRLEKKESKKGGSMFDKNELSAILRFGAEELFKEDKTDEETKK---KLESM 179
Query: 777 XXXXXXXXXXXXXXXXXXXXXXXXFLKGFKVANFEYIDXXXXXXXXXXXXXXXXXXXXXN 836
L FKVANF
Sbjct: 180 DIDEILERAEKVETKGGEGEEGNELLSAFKVANF-----------------------SSG 216
Query: 837 SDRANFWDKLLKDRYDVQKVEEHTTMGKGKRSRKQMAAADEDDITGLHXXXXXXXXXXXX 896
D A FW +L++ D + E T + R++K + D
Sbjct: 217 EDDATFWSRLIQP--DASDMVEETLAPRAARNKKSYVEDHQLD----------------- 257
Query: 897 XXXXXXXXXLQSGLAGRRGPYSKKKQRNVD---SLPFMEGEGRALRVYGFNQIQR---TQ 950
+ G+ + P ++ R +D SLP ++G +R + F + + T+
Sbjct: 258 ----KNSNRKRRGIDAQEKP-RRRSSRTMDTAVSLPLIDGSAHQVREWSFGNLSKKDATR 312
Query: 951 FLQTLMRYGFQNYDWKEFTPRLKGKSVEE---------IQRYAELVMIHLLEDINDS--- 998
F++ + ++G P G V++ + + EL + L+E D+
Sbjct: 313 FVRAVKKFG---------NPSQIGLIVDDVGGAIAKSSVDQQLELFTL-LIEGCQDAVKN 362
Query: 999 -----GYYADGVPKEMRTDETLVRLANISLVEEKVAAMEQGKITKLFPSYLLYEFPSLVG 1053
G D ++ E + R+ + + ++A + + + Y+ P
Sbjct: 363 NMDAKGTVLDFFGVAVKAHELIARVEELQFLARRIARYKDP--VRQYRIQAPYKKPQWSA 420
Query: 1054 GRVWKAEQDLLLLKALIKHGYARWQYI 1080
W D L+ + +GY W+ I
Sbjct: 421 SCGWTETDDARLMVGIHWYGYGNWEKI 447
>Os02g0689800 DEAD/DEAH box helicase domain containing protein
Length = 1059
Score = 161 bits (407), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 112/169 (66%), Gaps = 2/169 (1%)
Query: 576 RRLLE-SSGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIG 634
RRL++ GK++ L ++ +LK +GHR LI++Q MLD+LE++++ ++Y R+DG
Sbjct: 86 RRLIQFDCGKLQELAILLRRLKSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLDGSTQ 145
Query: 635 GAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAH 694
ERQ + RFN N F F+LSTR+GG+GINL ADTVI YDSDWNP D QA R H
Sbjct: 146 PEERQTLMQRFNT-NPKFFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCH 204
Query: 695 RLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLTKGTNIVQ 743
R+GQT +V IYRL+S TIEE +++ +K L+ LV+ R + T +
Sbjct: 205 RIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQRGSYNTEFFK 253
>Os02g0762800 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 879
Score = 150 bits (378), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 209/487 (42%), Gaps = 72/487 (14%)
Query: 261 LHPYQLEGLNFLR--YSWYHN----KRVILGDEMGLGKTIQSIAFLGSLFVDKLGPH--- 311
L P+Q EG+ F+ S N IL D+MGLGKT+QSI L +L
Sbjct: 235 LRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMV 294
Query: 312 ---LVVAPLSTLRNWEREFATWAPQMNVVMYFGSAASREIIRXXXXXXXXXXXXXXXXXX 368
+VV P S + NWE E W ++ + +++
Sbjct: 295 KRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSGIESFL------------ 342
Query: 369 XXXXXXDKKQSRIKFDVLLTSYEMINMDSTVL-KTIEWECMIVDEGHRLKNKDSKLFGQL 427
K SR++ VL+ SYE M S+ + + +I DE HRLKN + L
Sbjct: 343 -------KPLSRLQ--VLIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKAL 393
Query: 428 KEYHTKHRVLLTGTPVQNNLDELFMLMHFLE----GDS------------FGSIADLQEE 471
K R+LL+GTP+QN+L+E F +++F GD+ G E
Sbjct: 394 AALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTASAE 453
Query: 472 FKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSKQKEYYKAIL-TK 530
K++ ++ E L + +LRR + LPPK ++ +LT+ Q Y + +K
Sbjct: 454 EKNLGSERSAE-LSAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTALQTALYNHFIHSK 512
Query: 531 NYEVLTRRSGGHVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRRLLESSGKMELLDK 590
N + L ++ + L+KLC H + + + NS SG + L
Sbjct: 513 NVKRLISEGTKQSKVLAYITALKKLCNHPKLIYDTIKSNNS--------GGSGFDDCLRF 564
Query: 591 MMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNS 650
+L G + LDL R++ Y R+DG +RQ +++FN +
Sbjct: 565 FPPELFS-GRSGFV------TLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSR 617
Query: 651 TRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSR 710
F FLLS++AGG G+NL + +I++D DWNP D Q R Q SK + +++ +
Sbjct: 618 DEFVFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDKQVYQR-----QMSKEGLQKVIQQ 672
Query: 711 GTIEERM 717
+ +M
Sbjct: 673 EQADGKM 679
>Os07g0636200 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 747
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 218/487 (44%), Gaps = 71/487 (14%)
Query: 261 LHPYQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIAFLGSLFVDKLGPHLVVAPLSTL 320
L P+Q EG+ R++ H R ++ DEMGLGKT+Q+IA L P LV++P S
Sbjct: 256 LMPFQREGV---RFALQHGARTLIADEMGLGKTLQAIAVASCLH--DAWPVLVISPSSLR 310
Query: 321 RNWEREFATW--APQMNVVMYFGSAASREIIRXXXXXXXXXXXXXXXXXXXXXXXXDKKQ 378
+W W P ++++ D
Sbjct: 311 LHWASMIQHWLNIPTEDILVVLPQTGGSN--------------KAGYRLVYSNTKGDFNL 356
Query: 379 SRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQLKEYHT------ 432
+ F+V+ SY+++ +L ++++ +I DE H LKN +K + H+
Sbjct: 357 DGV-FNVI--SYDVVPKIKDMLLDLDFKIVIADESHFLKNAQAK-----RTMHSLPVLQK 408
Query: 433 -KHRVLLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEE------FKDINQDKQVEKLH 485
K+ VLL+GTP + ELF + L + ++ + F E+LH
Sbjct: 409 AKYVVLLSGTPALSRPIELFTQLQALYPTVYKNVNEYGNRYCKGGFFGLYQGASNHEELH 468
Query: 486 GMLKPH-LLRRFKKDVMKELPPKKELILRVELTSKQKEYYKAILTKNYEVLTRRSGGHVS 544
++K ++RR KKDV+ +LP K+ ++L+ K+ + +A+ +E+ T
Sbjct: 469 NLMKATVMIRRLKKDVLSQLPVKRRQQAFLDLSEKEMRHIRALF---HELET-------- 517
Query: 545 LINVVMELRKLCCHAFMTDEPEEPANSEEALRRLL------ESSGKMELLDKMMVKLKEQ 598
++++ C D E + + A + L+ + K+ + + + E
Sbjct: 518 -----VKIKIQSC-----DSQETMDSLKFAQKNLINKIYNDSAEAKIPAVLDYLGTIIEA 567
Query: 599 GHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLS 658
+ LI++ Q ML+ + +L +K RIDG+ RQ + F K+ + +LS
Sbjct: 568 ECKFLIFAHHQSMLEAIHQHLLKKKVKCIRIDGQTPVPVRQTLVTDFQNKDDIKAA-VLS 626
Query: 659 TRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMM 718
+AGG+G+ L A TVI + W P +QA RAHR+GQ S V IY L++ T+++ +
Sbjct: 627 IKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIW 686
Query: 719 QLTKKKM 725
+ + K+
Sbjct: 687 DVVQGKL 693
>Os06g0255700 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 946
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 132/523 (25%), Positives = 214/523 (40%), Gaps = 77/523 (14%)
Query: 261 LHPYQLEGLNFLRYSWYHNK--RVILGDEMGLGKTIQSIAFLGSLFVDKLGPH-LVVAPL 317
+ P+QLEG +FL + +K IL G GKT I+F+ S LVV P
Sbjct: 405 MRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPK 464
Query: 318 STLRNWEREFATWAPQ-MNVVMYFGSAASR-----EIIRXXXXXXXXXXXXXXXXXXXXX 371
L W+REF W + + + ++ A + E+++
Sbjct: 465 GILGTWKREFQRWQVEDIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQFSRIIC 524
Query: 372 XXXDKKQSRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQLKEYH 431
D + D LL + +I+DEGH +N+++ + LK
Sbjct: 525 GDGDGNIAAACRDRLLMVPNL---------------LILDEGHTPRNRETDVLASLKRVQ 569
Query: 432 TKHRVLLTGTPVQNNLDELFMLM-----HFLEGDSFGSIA-------------------- 466
T +V+L+GT QN++ E+F ++ FL+ +S IA
Sbjct: 570 TPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHD 629
Query: 467 -DLQEEFKD--INQDKQVEKLHGM-----LKPHLLRRFKKDVMKELPPKKELILRVELTS 518
E +D +N D K H + L +L +K D++ ELP + + ++L++
Sbjct: 630 SAFTESVEDTLLNDDNFTRKAHVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLST 689
Query: 519 KQKEYYKAILTKNYEVLTRRSGGHVSLINVVMELRKLCCHAFMTDEPEEPANSEEA-LRR 577
KQKE I + YE R S + + + D + +N +A +
Sbjct: 690 KQKEIVHKI--EAYEKFKR------SAVGTALYIHPCLSEISEGDAADRASNLTDATVDS 741
Query: 578 LLES-----SGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYR-KWSYER--- 628
L+ES K + ++ G ++L +SQ+ + LE L R W +
Sbjct: 742 LIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIF 801
Query: 629 -IDGKIGGAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADL 687
I G +R++ +D+FN + F S +A G GI+L A VII D NP
Sbjct: 802 MISGDTSADDREVAMDQFNNSADAKVLFG-SIKACGEGISLVGASRVIILDVHLNPSVTR 860
Query: 688 QAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHL 730
QA+ RA R GQ KV +YRLV+ + E + + KK V+ L
Sbjct: 861 QAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKL 903
>Os05g0247900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 856
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 143/296 (48%), Gaps = 58/296 (19%)
Query: 264 YQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIAFLGSLFVD------------KLGPH 311
+Q +G+ FL + +N +LGD+MGLGKTIQ+IAFL ++ K+ P
Sbjct: 135 HQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDNDHGDQLVEGRKIAPI 194
Query: 312 LVVAPLSTLRNWEREFATWAPQMNVVMYFGSAASREIIRXXXXXXXXXXXXXXXXXXXXX 371
L++ P S +RNWE EFA WA + +V +Y G +R+++
Sbjct: 195 LILCPTSVIRNWENEFAEWA-RCSVAVYHG--PNRDLVL--------------------- 230
Query: 372 XXXDKKQSRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQLKEYH 431
+K + ++++TS++ + +L I W+ ++VDE HRLKN+ SKL+ E
Sbjct: 231 ----QKVETQRLEIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLEIT 286
Query: 432 TKHRVLLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQ----------------EEFKDI 475
T+ R LTGT +QN + ELF L ++ G + E F +
Sbjct: 287 TRKRFGLTGTIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQV 346
Query: 476 NQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKE-LILRVELTSKQKEYYKAILTK 530
DK+ + L +L LLRR K++ + L KE I+ ++ QK Y+ +L +
Sbjct: 347 -ADKRKKHLVSVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQ 401
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
Query: 580 ESSGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQ 639
E GKM L++++ QG ++L++S MLD+LE +L + + + R DG RQ
Sbjct: 517 EHCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQ 576
Query: 640 IRIDRFNAKNSTRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQT 699
+ ID FN + ++ FL+STRAG LG+NL +A+ V+I+D WNP DLQA R+ R GQ
Sbjct: 577 LLIDEFN-RCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQR 635
Query: 700 SKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVV-GRLTK 737
V ++RL+ G++EE + K L ++ V G++ K
Sbjct: 636 RHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVSGKIEK 674
>Os02g0650800
Length = 1439
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 133/550 (24%), Positives = 237/550 (43%), Gaps = 86/550 (15%)
Query: 261 LHPYQLEGLNFLRYSWY------------HNKRVILGDEM-----GLGKTIQSIAFLGSL 303
+ P+Q EG F+ W +N I G + G GKT +I F+ S
Sbjct: 882 MFPHQQEGFEFM---WRKLAGGTSIEQLRNNANTIEGGCVISHAPGTGKTRLAITFVQSY 938
Query: 304 FV--DKLGPHLVVAPLSTLRNWEREFATWAPQMNVVMYFGSAASREI-IRXXXXXXXXXX 360
F + P +++AP L WE+EF W V + F S+EI +
Sbjct: 939 FAFFPECCP-VIIAPRGMLATWEQEFRKW----KVKVPFHVLNSKEINWKEDRTIKQLAI 993
Query: 361 XXXXXXXXXXXXXXDKK-QSRIKF-------DVLLTSYEMI-------NMDSTVLKTIEW 405
D K + ++K ++ SY + +MD +++ +
Sbjct: 994 MDENLAQSLARNKLDHKFRRKLKLASWRKGSSIIGVSYTLFRKLANQSSMDGNMVRNLLL 1053
Query: 406 E---CMIVDEGHRLKNKDSKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLE---- 458
E +++DEGH +NK S ++ L+E TK R++L+GTP QN+ EL +++ +
Sbjct: 1054 EMPDLLVLDEGHTPRNKKSLIWKVLEEVRTKKRIILSGTPFQNSFLELSNVLYLIRPKFA 1113
Query: 459 ----GDSFGSIADLQEEFKDIN----QDKQVEKLHGMLKPHLLRRFKKDVM-KELPPKKE 509
SF I L++ + + +K+++++ +L P ++ D++ K LP +E
Sbjct: 1114 RHFASKSFKKIG-LEDYWTSLTLNNITEKKIDEIRQILDP-IVHIHNGDILQKSLPGLRE 1171
Query: 510 LILRVELTSKQKEYYKAILTKNYEVLTRRSGGHVSLINVVMELRKLCCHAFMTD----EP 565
++ + QKE I+T +T + ++ ++ H F+
Sbjct: 1172 SVVILNPLPHQKE----IITAMENTVT------MGTLDAEYKISLASIHPFLVTCAKLSE 1221
Query: 566 EEPANSEEALRRLLESSGKMELLDKMMVKL----KEQGHRVLIYSQFQHMLDLLEDYLS- 620
+E ++ + +L + L + + + K ++++ + RVL++SQ+ L L+ D LS
Sbjct: 1222 KETSSVDVSLLKSLRPNPCVGVKTKFVLEIVRLCEAMKERVLVFSQYLEPLSLIMDQLSK 1281
Query: 621 -YRKWSYERI---DGKIGGAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLATADTVII 676
+ E I G + R+ ++ FN S L ST+A GI L A V++
Sbjct: 1282 MFNWIEGEEILLMSGNVLVQNREALMEAFNDMKSNAKVMLASTKACCEGITLIGASRVVL 1341
Query: 677 YDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGR-- 734
D WNP QA+ RA+R+GQ V Y L++ GT E+ KK + L+ +
Sbjct: 1342 LDVVWNPSVGRQAIGRAYRIGQEKIVYTYNLITEGTKEKDKYDRQAKKDHMSKLLFSKEP 1401
Query: 735 LTKGTNIVQE 744
G N+ QE
Sbjct: 1402 HAAGFNLSQE 1411
>Os07g0434500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 909
Score = 107 bits (268), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 161/367 (43%), Gaps = 53/367 (14%)
Query: 408 MIVDEGHRLKNKDSKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLM-----HFLEGDSF 462
+I+DEGH +N+++ + LK T +V+L+GT QN++ E+F ++ FL+ +S
Sbjct: 509 LILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESS 568
Query: 463 GSIA---------------------DLQEEFKD--INQDKQVEKLHGM-----LKPHLLR 494
IA E +D +N D K H + L +L
Sbjct: 569 RPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKSHVIRSLRELTKDVLH 628
Query: 495 RFKKDVMKELPPKKELILRVELTSKQKEYYKAILTKNYEVLTRRSGGHVSLINVVMELRK 554
+K D++ ELP + + ++L++KQKE I + YE R S + + +
Sbjct: 629 YYKGDILDELPGLVDFSVFLKLSTKQKEIVHKI--EAYEKFKR------SAVGTALYIHP 680
Query: 555 LCCHAFMTDEPEEPANSEEA-LRRLLES-----SGKMELLDKMMVKLKEQGHRVLIYSQF 608
D + N +A + L+ES K + ++ G ++L +SQ+
Sbjct: 681 CLSEISEGDAADRATNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQY 740
Query: 609 QHMLDLLEDYLSYR-KWSYER----IDGKIGGAERQIRIDRFNAKNSTRFCFLLSTRAGG 663
+ LE L R W + I G +R++ +D+FN + F S +A G
Sbjct: 741 ILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFG-SIKACG 799
Query: 664 LGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKK 723
GI+L A VII D NP QA+ RA R GQ KV +YRLV+ + E + + K
Sbjct: 800 EGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFK 859
Query: 724 KMVLEHL 730
K V+ L
Sbjct: 860 KEVIPKL 866
>Os05g0392400 SNF2-related domain containing protein
Length = 450
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 164/352 (46%), Gaps = 63/352 (17%)
Query: 408 MIVDEGHRLKNKDSKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLM---------HFLE 458
+++DEGH +N+ S ++ L + T+ R++L+GTP QNN EL+ ++ FL
Sbjct: 31 LVLDEGHTPRNERSVIWKTLGKVKTEKRIILSGTPFQNNFLELYNILCLVRPRFGEMFLT 90
Query: 459 GDSFGSIADLQEEFKDINQDK----------------QVEKLHGMLKPH-------LLRR 495
G + ++ +D DK EK+ +LKP +LR
Sbjct: 91 KTRVGRRHCVSKKQRDKFSDKYEKGVWASLTSNVTDDNAEKVRSILKPFVHIHNGTILRT 150
Query: 496 FKK-----DVMKELPPKKELILRVELTSKQKEYYKAILTKNYEVLTRRSGGHVSLINVVM 550
V+K LP +K +I +VE + +E + + H SL+N +
Sbjct: 151 LPGLRECVIVLKPLPLQKSIIRKVENVGSGNNF-------EHEYVISLASTHPSLVNAIN 203
Query: 551 ELRKLCCHAFMTDEP---EEPANSEEALRRLLESSGKMELLDKMMVKLKEQGHRVLIYSQ 607
+ A + D+P +N E ++ + ME++ ++ LKE +VLI+SQ
Sbjct: 204 MTEE---EASLIDKPMLERLRSNPYEGVK----TRFVMEVV-RLCEALKE---KVLIFSQ 252
Query: 608 FQHMLDLLEDYL-SYRKW----SYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTRAG 662
F L+L++++L KW ++DGKI RQ I+ FN +S L STRA
Sbjct: 253 FIQPLELIKEHLRKIFKWREGKEILQMDGKILPRYRQNSIEVFNNPDSDARVLLASTRAC 312
Query: 663 GLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIE 714
GI+L A V++ D WNP QA++RA R+GQ V Y L++ GT E
Sbjct: 313 CEGISLTGASRVVLLDVVWNPAVGRQAISRAFRIGQKKFVYTYNLITYGTGE 364
>Os02g0527100 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 810
Score = 107 bits (267), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 4/155 (2%)
Query: 582 SGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIR 641
S K+ L + + L+ G + +I+SQ+ LDLL+ LS +S+ R+DG + +R+
Sbjct: 643 SSKISFLLQELEVLRTSGAKSIIFSQWTAFLDLLQIPLSRHNFSFARLDGTLNLQQREKV 702
Query: 642 IDRFNAKNSTRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSK 701
I F+ S L+S +AGG+GINL A + D WNP + QA+ R HR+GQT
Sbjct: 703 IKEFSEDKSI-LVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAIMRIHRIGQTKS 761
Query: 702 VMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLT 736
V I R + +GT+EERM + +K + ++ G LT
Sbjct: 762 VSIKRFIVKGTVEERMEAVQARK---QRMISGALT 793
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 144/352 (40%), Gaps = 100/352 (28%)
Query: 283 ILGDEMGLGKTIQSIAFL------------------------GSLFV------------- 305
IL D MGLGKTI +IA L G L V
Sbjct: 199 ILADAMGLGKTIMTIALLLADSSKGCITTQHSTHICEEASGLGELPVQPHDDVKKLAIPF 258
Query: 306 --DKL---------GPHLVVAPLSTLRNWEREFATWAPQMNVVMYFGSAASREIIRXXXX 354
KL G +L+V P++ L W+ E A +V +Y +R
Sbjct: 259 SFSKLRKPKTPLIAGGNLIVCPMTLLGQWKAEIEAHATPGSVSIYVHYGQNRP------- 311
Query: 355 XXXXXXXXXXXXXXXXXXXXDKKQSRI-KFDVLLTSY-----EMINMDST---VLKTIEW 405
K+ + I + D++LT+Y E N +ST L +I W
Sbjct: 312 ---------------------KEANLIGQSDIVLTTYGVLSSEFSNENSTESGGLYSIHW 350
Query: 406 ECMIVDEGHRLKNKDSKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEGDSFGSI 465
+++DE H +K+ S + R LTGTP+QNNL++++ L FL + + +
Sbjct: 351 FRVVLDEAHMIKSPKSLISLAAAALTADRRWCLTGTPIQNNLEDIYSLFRFLRVEPWRNW 410
Query: 466 A---DLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKE------LPPKKELILRVEL 516
+ L ++ + ++ ++ + +LKP +LRR K KE LPP + +L
Sbjct: 411 SLWHKLVQKPYEEGDERGLKLVQSILKPIMLRRNKNSTDKEGRPILILPPANIEVKYCDL 470
Query: 517 TSKQKEYYKAILTKN------YEVLTRRSGGHVSLINVVMELRKLCCHAFMT 562
+ +K++Y A+ ++ + R + S++ +++ LR+ C H F+
Sbjct: 471 SETEKDFYDALFRRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLV 522
>Os01g0636700 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 469
Score = 103 bits (257), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 128/290 (44%), Gaps = 55/290 (18%)
Query: 260 TLHPYQLEGLNFL-RYSWYHNKRVILGDEMGLGKTIQSIAFLGSLFVDKLGPH-LVVAPL 317
+L P+Q +GL +L R + IL D+MGLGKT Q+ AFL LF L L+VAP
Sbjct: 205 SLFPHQKDGLEWLWRLHCEKSGGGILADDMGLGKTRQASAFLAGLFYSDLTQRVLIVAPG 264
Query: 318 STLRNWEREFATWAPQMNVVMYFGSAASREIIRXXXXXXXXXXXXXXXXXXXXXXXXDKK 377
+ L W E +++ F A +R
Sbjct: 265 TILHQWIAELTKVGFNEDLIHSFWCAKTRH--------------------------DSLA 298
Query: 378 QSRIKFDVLLTSYEMINMDSTVLKTIE------------WECMIVDEGHRLKNKDSKLFG 425
Q + VLL +Y+++ + + L + W+ +I+DEGH LKN ++K
Sbjct: 299 QVLKEGGVLLITYDLVRLYNEELNGMSSKSSKMRRACPSWDYVILDEGHVLKNPNTKNAA 358
Query: 426 QLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEEF-KDIN-------- 476
LK V+LTGTPVQNNL E LM GS+A + +F K I+
Sbjct: 359 ALKSLSRGQTVVLTGTPVQNNLSEFHSLMSLCCPTVLGSLAAFERDFCKPIDMGNVLEAT 418
Query: 477 ------QDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSKQ 520
K+ + M++P+ LRR K+ + LP K +L++ ++LT Q
Sbjct: 419 TEVVMISSKKAMEFRKMVRPYFLRRTKESIESLLPNKADLVIWLKLTPYQ 468
>Os07g0642400 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 821
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 103/191 (53%), Gaps = 7/191 (3%)
Query: 553 RKLCCH-AFMTDEPEEP-ANSEEALRRLLESSGKMELLDKMMVKLKEQG--HRVLIYSQF 608
R LC F+ E + P +S L R L S K++ L K++ + + + + +I+SQF
Sbjct: 615 RSLCKEDLFIAPEIKHPDEDSSVNLDRPLSS--KVQALLKLLRRSQSEDPLSKSVIFSQF 672
Query: 609 QHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLL-STRAGGLGIN 667
+ ML LLE L ++ R+DG + +R I +F LL S +A G G+N
Sbjct: 673 RKMLILLEGPLKAAGFNILRLDGSMTAKKRSEVIRQFGCVGPDSPTVLLASLKAAGAGVN 732
Query: 668 LATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVL 727
L A TV ++D WNP + QAM R HR+GQT +V + RL+ + +IEERM++L ++K L
Sbjct: 733 LTAASTVYLFDPWWNPGVEEQAMDRVHRIGQTKEVKVVRLIVKDSIEERMLELQERKKKL 792
Query: 728 EHLVVGRLTKG 738
GR G
Sbjct: 793 ISGAFGRKKGG 803
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 134/319 (42%), Gaps = 78/319 (24%)
Query: 283 ILGDEMGLGKTIQSIAFLGSLFVDKLGPH---------------------LVVAPLSTLR 321
I D+MGLGKT+ ++ +G +G LVV P S
Sbjct: 244 IFADDMGLGKTLTLLSLIGRSKARNVGGKKARGAKRRKVEEAVEEESRTTLVVCPPSVFS 303
Query: 322 NW--EREFATWAPQMNVVMYFGSAASREIIRXXXXXXXXXXXXXXXXXXXXXXXXDKKQS 379
+W + E T + V +Y G +K+
Sbjct: 304 SWVTQLEEHTKTGSLKVYLYHGE------------------------------RTKEKKE 333
Query: 380 RIKFDVLLTSYEMINMD----STVLKTIEWECMIVDEGHRLKNKDSKLFGQLKEYHTKHR 435
+K+D+++T+Y + + + +K IEW +I+DE H +KN ++ + + + R
Sbjct: 334 LLKYDIVITTYSTLGQELEQEGSPVKEIEWFRVILDEAHVIKNSAARQTKAVIALNAERR 393
Query: 436 VLLTGTPVQNNLDELFMLMHFLEGDSFG------SIADLQEEFKDINQDKQVEKLHGMLK 489
++TGTP+QN+ +L+ LM FL F S+ L E K N + +L +L
Sbjct: 394 WVVTGTPIQNSSFDLYPLMAFLRFQPFSIKSYWQSLIQLPLERK--NNGIGLARLQSLLG 451
Query: 490 PHLLRRFKK-----DVMKELPPKKELILRVELTSKQKEYYKAILTKNYEVLTRRSG---- 540
LRR K+ + +PPK L +EL+++++EYY + + L R G
Sbjct: 452 AISLRRTKETESGSKSLVSIPPKTVLACYIELSAEEREYYDQMELEGKNKL-REFGDRDS 510
Query: 541 ---GHVSLINVVMELRKLC 556
+ +++ ++ LR+LC
Sbjct: 511 ILRNYSTVLYFILRLRQLC 529
>Os04g0177300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 664
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 85/147 (57%), Gaps = 3/147 (2%)
Query: 582 SGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIR 641
S K+ L K++ L+E+ + +++SQF DLLE + + + R DGK+ R+
Sbjct: 497 SCKVIKLIKILEGLQEKREKSIVFSQFTSFFDLLEVPFNQKGIKFLRFDGKLSQKHREKV 556
Query: 642 IDRFNAKNSTRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSK 701
+ F +++ + L+S +AGG+G+NL A V + D WNP + QA+ R HR+GQ
Sbjct: 557 LKEF-SESKDKLVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRA 615
Query: 702 VMIYRLVSRGTIEERM--MQLTKKKMV 726
V + R + + T+EERM +Q K++M+
Sbjct: 616 VQVRRFIVKDTVEERMQKVQACKQRMI 642
Score = 90.9 bits (224), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 148/325 (45%), Gaps = 75/325 (23%)
Query: 283 ILGDEMGLGKTIQSIAFL-----GSLFVDKLGPH-----------------LVVAPLSTL 320
IL D MGLGKT+ +IA + G L DK G L++ P++ L
Sbjct: 80 ILADAMGLGKTVMTIALILSNPRGELEQDKRGTRDRDTKAQTSRSSVRGGTLIICPMALL 139
Query: 321 RNWEREF-ATWAP-QMNVVMYFGSAASREIIRXXXXXXXXXXXXXXXXXXXXXXXXDKKQ 378
W+ E A P ++V +Y+G + ++ +
Sbjct: 140 GQWKDELEAHSTPGALSVFVYYGGDRTTDL-----------------------------R 170
Query: 379 SRIKFDVLLTSYEMI-----NMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQLKEYHTK 433
+ V+LT+Y ++ N S++ I+W +++DE H +K+ +K E +
Sbjct: 171 FMAQHSVVLTTYGVLQSAHKNDGSSIFHRIDWYRVVLDEAHTIKSPRTKAARAAYELTSH 230
Query: 434 HRVLLTGTPVQNNLDELFMLMHFLEGDSFGSIA----DLQEEFKDINQDKQVEKLHGMLK 489
R LTGTP+QNNL++LF L+ FL + +G + +Q +++ ++ ++ + +L+
Sbjct: 231 CRWCLTGTPLQNNLEDLFSLLCFLHVEPWGDASWWNKLIQRPYEN-GDERGLKLVRAILR 289
Query: 490 PHLLRRFK--KDVMKE----LPPKKELILRVELTSKQKEYYKAILTKN------YEVLTR 537
P +LRR K KD M LPP I+ E + ++++Y+A+ ++ +
Sbjct: 290 PLMLRRTKETKDKMGNPILVLPPANIEIVECEQSEDERDFYEALFRRSKVQFDKFVAQGS 349
Query: 538 RSGGHVSLINVVMELRKLCCHAFMT 562
+ +++ +++ LR+ C H F+
Sbjct: 350 VLNNYANILELLLRLRQCCDHPFLV 374
>Os01g0779400 SWAP/Surp domain containing protein
Length = 1213
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 1/149 (0%)
Query: 601 RVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTR 660
+ +++SQ+ MLDL+E +L SY R+DG + A R + FN N ++S +
Sbjct: 1060 KAIVFSQWTRMLDLVEVHLKSSHLSYRRLDGTMSVAARDRAVKDFNT-NPEVSVMIMSLK 1118
Query: 661 AGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQL 720
A LG+N+ A V++ D WNP + QA+ RAHR+GQT V + RL + T+E+R++ L
Sbjct: 1119 AASLGLNMVAACHVLLLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILAL 1178
Query: 721 TKKKMVLEHLVVGRLTKGTNIVQEELDDI 749
+KK + G G + + ++D+
Sbjct: 1179 QEKKREMVASAFGEDKSGAHQTRLTVEDL 1207
>AK110250
Length = 1046
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
Query: 581 SSGKMELLDKMMVKLKEQGHRV--LIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAER 638
SS K+E L + + +L+ + + L++SQF + LDL+ L + R++G + R
Sbjct: 873 SSTKIEALVEELTQLRSEDKTIKSLVFSQFVNFLDLIAFRLQRAGFQICRLEGNMSPEAR 932
Query: 639 QIRIDRFNAKNSTRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQ 698
I F +N FL+S +AGG+ +NL A V + D WNP ++QAM R HRLG+
Sbjct: 933 NRTIKHF-MENPNVTVFLVSLKAGGVALNLTEASRVYLMDPWWNPSVEVQAMDRIHRLGR 991
Query: 699 TSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGR 734
+++ R+V +IE R+++L KK + +G+
Sbjct: 992 HRPIIVKRMVIENSIESRIIELQNKKSAMIEAAIGK 1027
>Os08g0180300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1030
Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
Query: 601 RVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTR 660
+ +++SQ+ MLDLLE L+ Y R+DG + R + FN R ++S +
Sbjct: 877 KAIVFSQWTGMLDLLELSLNSNLIQYRRLDGTMSLNSRDKAVKDFNTDPEVRV-MIMSLK 935
Query: 661 AGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQL 720
AG LG+N+ A VI+ D WNP+A+ QA+ RAHR+GQT V + RL + T+E+R++ L
Sbjct: 936 AGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILAL 995
Query: 721 TKKKMVLEHLVVGRLTKGTNIVQEELDDI 749
++K + G G + + +DD+
Sbjct: 996 QEEKRAMVSSAFGEDKSGGHATRLTVDDL 1024
>Os07g0511500 SNF2-related domain containing protein
Length = 635
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Query: 603 LIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTRAG 662
+++SQF LDL+E L +++GK+ E+ ID F R FL+S +AG
Sbjct: 486 IVFSQFTSFLDLIEFSLQKSGIKCVQLNGKMNIVEKGKAIDTFTNDPDCRI-FLMSLKAG 544
Query: 663 GLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTK 722
G+ +NL A V + D WNP + QA R HR+GQ + R V + T+EER++QL +
Sbjct: 545 GVALNLTVASHVFLMDPWWNPAVESQAQDRIHRIGQFKPIRSMRFVIKDTVEERILQLQE 604
Query: 723 KKMVLEHLVVG 733
KK ++ VG
Sbjct: 605 KKRLVFEGTVG 615
>Os04g0629300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1051
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 85/149 (57%), Gaps = 1/149 (0%)
Query: 601 RVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTR 660
+ +++SQ+ +LDLLE L + + R+DG + R+ + FN R L+S +
Sbjct: 898 KAIVFSQWTGLLDLLELSLDSSRIKFRRLDGAMSLNLREAAVREFNTDPEVRV-MLMSLK 956
Query: 661 AGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQL 720
AG LG+N+ A VI+ D WNP+A+ QA+ RAHR+GQT V + RL + T+E+R++ L
Sbjct: 957 AGNLGLNMVAACHVIMIDPWWNPYAEDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILAL 1016
Query: 721 TKKKMVLEHLVVGRLTKGTNIVQEELDDI 749
+KK + G G + + +DD+
Sbjct: 1017 QEKKRKMVQSAFGEDKPGGSATRLTIDDL 1045
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.134 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 42,613,848
Number of extensions: 1767425
Number of successful extensions: 6107
Number of sequences better than 1.0e-10: 30
Number of HSP's gapped: 6020
Number of HSP's successfully gapped: 39
Length of query: 1335
Length of database: 17,035,801
Length adjustment: 113
Effective length of query: 1222
Effective length of database: 11,135,619
Effective search space: 13607726418
Effective search space used: 13607726418
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 162 (67.0 bits)