BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0681400 Os03g0681400|AK103809
(161 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0681400 Similar to Ubiquitin-conjugating enzyme E2-18 ... 308 2e-84
Os12g0636800 Ubiquitin-conjugating enzyme, E2 domain contai... 294 2e-80
Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a 91 3e-19
Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 ... 89 1e-18
Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ub... 86 2e-17
Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 85 2e-17
Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b 85 2e-17
Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 84 3e-17
Os01g0273100 Similar to Ubiquitin conjugating protein-like ... 83 9e-17
Os07g0166800 Rad6 (Ubiquitin carrier protein) 79 2e-15
Os03g0791800 Rad6 (Ubiquitin carrier protein) 78 2e-15
Os05g0182500 Rad6 (Ubiquitin carrier protein) 77 4e-15
Os01g0673600 Similar to Ubiquitin-conjugating enzyme E2 77 6e-15
Os02g0634800 Ubiquitin-conjugating enzyme, E2 domain contai... 74 6e-14
Os10g0536000 Similar to SUMO E2 conjugating enzyme SCE1 72 2e-13
Os03g0123100 Similar to SUMO E2 conjugating enzyme SCE1 71 3e-13
Os05g0460200 Similar to Ubiquitin carrier protein 71 4e-13
Os01g0839700 Similar to Ubiquitin carrier protein 67 6e-12
Os07g0577400 Similar to Constitutive photomorphogenesis pro... 66 1e-11
Os01g0925800 Similar to Ubiquitin conjugating enzyme 65 2e-11
>Os03g0681400 Similar to Ubiquitin-conjugating enzyme E2-18 kDa (EC 6.3.2.19)
(Ubiquitin- conjugating enzyme 15) (Ubiquitin-protein
ligase) (Ubiquitin carrier protein) (PM42)
Length = 161
Score = 308 bits (788), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/161 (96%), Positives = 155/161 (96%)
Query: 1 MTXXXXXXRKVLSKIACNRLQKELAEWQVNPPSGFKHKVTDNLQRWVIEVAGAAGTLYAG 60
MT RKVLSKIACNRLQKELAEWQVNPPSGFKHKVTDNLQRWVIEVAGAAGTLYAG
Sbjct: 1 MTSSSSPSRKVLSKIACNRLQKELAEWQVNPPSGFKHKVTDNLQRWVIEVAGAAGTLYAG 60
Query: 61 ETYQLQVDFPEHYPMEAPQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120
ETYQLQVDFPEHYPMEAPQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISI
Sbjct: 61 ETYQLQVDFPEHYPMEAPQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120
Query: 121 LSMLSSSPAKQRPADNDRYVRNCRNGRSPKETRWWFHDDKV 161
LSMLSSSPAKQRPADNDRYVRNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPAKQRPADNDRYVRNCRNGRSPKETRWWFHDDKV 161
>Os12g0636800 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 161
Score = 294 bits (753), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/161 (91%), Positives = 152/161 (94%)
Query: 1 MTXXXXXXRKVLSKIACNRLQKELAEWQVNPPSGFKHKVTDNLQRWVIEVAGAAGTLYAG 60
MT RK LSKIACNRLQKELAEWQV+PPSGFK++V+DNLQRWVIEV GAAGTLYAG
Sbjct: 1 MTSSSSPSRKALSKIACNRLQKELAEWQVSPPSGFKYRVSDNLQRWVIEVTGAAGTLYAG 60
Query: 61 ETYQLQVDFPEHYPMEAPQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120
ETYQLQVDFPEHYPMEAPQVIFL+PAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISI
Sbjct: 61 ETYQLQVDFPEHYPMEAPQVIFLNPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120
Query: 121 LSMLSSSPAKQRPADNDRYVRNCRNGRSPKETRWWFHDDKV 161
LSMLSSSPAKQRP DNDRYVRNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPAKQRPQDNDRYVRNCRNGRSPKETRWWFHDDKV 161
>Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a
Length = 147
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 15 IACNRLQKELAEWQVNPPSGFKHK-VTDNLQRWVIEVAGAAGTLYAGETYQLQVDFPEHY 73
+A R+QKEL + Q +PP+ V +++ W + G + + YAG + + + FP Y
Sbjct: 1 MASKRIQKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDY 60
Query: 74 PMEAPQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 125
P + P+V F HP+I SNG ICLDIL D WSPA+T+S V +SI S+L+
Sbjct: 61 PFKPPKVAFRTKV-FHPNINSNGSICLDILKDQWSPALTISKVLLSICSLLT 111
>Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 kDa 9 (EC 6.3.2.19)
(Ubiquitin- protein ligase 9) (Ubiquitin carrier protein
9) (UBCAT4B)
Length = 148
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 15 IACNRLQKELAEWQVNPPSGFKHK-VTDNLQRWVIEVAGAAGTLYAGETYQLQVDFPEHY 73
+A R+ KEL + Q +PP+ V+D++ W + G + Y+G + + + FP Y
Sbjct: 1 MALRRIIKELKDLQRDPPTSCSAGPVSDDMFHWQATIMGPNDSPYSGGVFLVTIHFPPDY 60
Query: 74 PMEAPQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 125
P + P+V F HP+I SNG+ICLDIL D WSPA+T+S V +SI S+L+
Sbjct: 61 PFKPPKVAFKTKV-FHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLT 111
>Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier
protein)
Length = 148
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Query: 15 IACNRLQKELAEWQVNPPSGFKHK-VTDNLQRWVIEVAGAAGTLYAGETYQLQVDFPEHY 73
+A R+ KEL + Q +PP+ V +++ W + G + + +AG + + + FP Y
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDY 60
Query: 74 PMEAPQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 125
P + P+V F HP+I SNG ICLDIL + WSPA+T+S V +SI S+L+
Sbjct: 61 PFKPPKVSFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 111
>Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Query: 15 IACNRLQKELAEWQVNPPSGFK-HKVTDNLQRWVIEVAGAAGTLYAGETYQLQVDFPEHY 73
+A R+QKEL + + +PP+ ++L W + G + + YAG + + + FP Y
Sbjct: 1 MASKRIQKELMDLRKDPPTSCSAGPAGEDLFHWQATIMGPSDSPYAGGVFFVNIHFPPDY 60
Query: 74 PMEAPQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 125
P + P+V F HP+I SNG ICLDIL + WSPA+T+S V +SI S+L+
Sbjct: 61 PFKPPKVNFQTKV-YHPNINSNGSICLDILKEQWSPALTISKVLLSISSLLT 111
>Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b
Length = 148
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Query: 15 IACNRLQKELAEWQVNPPSGFKHK-VTDNLQRWVIEVAGAAGTLYAGETYQLQVDFPEHY 73
+A R+ KEL + Q +PP+ V +++ W + G + + YAG + + + FP Y
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60
Query: 74 PMEAPQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 125
P + P+V L HP+I SNG ICLDIL + WSPA+T+S V +SI S+L+
Sbjct: 61 PFKPPKVA-LKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 111
>Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 15 IACNRLQKELAEWQVNPPSGFK-HKVTDNLQRWVIEVAGAAGTLYAGETYQLQVDFPEHY 73
+A R+ KEL + Q +PP+ +++ W + G + YAG + + + FP Y
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPAGEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
Query: 74 PMEAPQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 125
P + P+V F HP+I SNG ICLDIL + WSPA+T+S V +SI S+L+
Sbjct: 61 PFKPPKVSFKTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 111
>Os01g0273100 Similar to Ubiquitin conjugating protein-like
(Ubiquitin-conjugating enzyme) (Ubiquitinating enzyme)
Length = 191
Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 19 RLQKELAEWQVNPPSGFK-HKVTDNLQRWVIEVAGAAGTLYAGETYQLQVDFPEHYPMEA 77
RLQ EL + G DN+ WV +AG+A T Y G +Y+L + FP YP +
Sbjct: 51 RLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKP 110
Query: 78 PQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 125
P+V F P HP++ ++G+ICLDIL D WS A V ++ +SI S+L
Sbjct: 111 PKVRFETPC-FHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLG 157
>Os07g0166800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
Query: 12 LSKIACNRLQKELAEWQVNPPSGFKHKVTDN-LQRWVIEVAGAAGTLYAGETYQLQVDFP 70
+S A RL ++ Q +PP+G DN + W + G T + G T++L + F
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
Query: 71 EHYPMEAPQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSPAK 130
E YP + P V F+ HP+IY++G ICLDIL + WSP V+++ SI S+L P
Sbjct: 61 EDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL-CDPNP 118
Query: 131 QRPADND 137
PA+++
Sbjct: 119 NSPANSE 125
>Os03g0791800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
Query: 12 LSKIACNRLQKELAEWQVNPPSGFKHKVTDN-LQRWVIEVAGAAGTLYAGETYQLQVDFP 70
+S A RL ++ Q +PP+G DN + W + G T + G T++L + F
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
Query: 71 EHYPMEAPQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSPAK 130
E YP + P V F+ HP+IY++G ICLDIL + WSP V+++ SI S+L P
Sbjct: 61 EDYPNKPPVVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL-CDPNP 118
Query: 131 QRPADND 137
PA+++
Sbjct: 119 NSPANSE 125
>Os05g0182500 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Query: 12 LSKIACNRLQKELAEWQVNPPSGFKHKVTDN-LQRWVIEVAGAAGTLYAGETYQLQVDFP 70
+S A RL ++ +PP+G DN + W + G T + G T++L + F
Sbjct: 1 MSTPARKRLMRDFKRLMQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
Query: 71 EHYPMEAPQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSPAK 130
E YP + P V F+ HP+IY++G ICLDIL + WSP V+++ SI S+L P
Sbjct: 61 EDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL-CDPNP 118
Query: 131 QRPADND 137
PA+++
Sbjct: 119 NSPANSE 125
>Os01g0673600 Similar to Ubiquitin-conjugating enzyme E2
Length = 153
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 19 RLQKELAEWQVNPPSGFKHKVTD-NLQRWVIEVAGAAGTLYAGETYQLQVDFPEHYPMEA 77
R+ KE P G ++ N++ + + + G A + Y G ++L++ PE YPM A
Sbjct: 9 RIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMAA 68
Query: 78 PQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSS 126
P+V FL HP+I G ICLDIL D WSPA+ + +V +SI ++LS+
Sbjct: 69 PKVRFLTKI-YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA 116
>Os02g0634800 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 157
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 42 NLQRWVIEVAGAAGTLYAGETYQLQVDFPEHYPMEAPQVIFLHPAPMHPHI-YSNGHICL 100
N+ +W + G + T + G +QL PE YP+ PQV FL HP++ + G ICL
Sbjct: 33 NIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPLLPPQVRFLTKI-FHPNVHFKTGEICL 91
Query: 101 DILYDSWSPAMTVSSVCISILSMLS 125
DIL ++WSPA T+ SVC +I+++++
Sbjct: 92 DILKNAWSPAWTLQSVCRAIIALMA 116
>Os10g0536000 Similar to SUMO E2 conjugating enzyme SCE1
Length = 160
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 15 IACNRLQKELAEWQVNPPSGFKHK------VTDNLQRWVIEVAGAAGTLYAGETYQLQVD 68
IA RL +E W+ N P GF K + NL W + G GT + G Y L +
Sbjct: 5 IARGRLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLH 64
Query: 69 FPEHYPMEAPQVIFLHPAPMHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSS 126
F E YP + P+ F HP++Y +G +CL IL + W PA+TV + + I +L
Sbjct: 65 FSEDYPSKPPKCKFPQ-GFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLL-D 122
Query: 127 SPAKQRPADNDRY 139
P PA D Y
Sbjct: 123 QPNPADPAQTDGY 135
>Os03g0123100 Similar to SUMO E2 conjugating enzyme SCE1
Length = 160
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 15 IACNRLQKELAEWQVNPPSGFKHK------VTDNLQRWVIEVAGAAGTLYAGETYQLQVD 68
IA RL +E W+ N P GF K T NL W + G GT + G + L +
Sbjct: 5 IARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLH 64
Query: 69 FPEHYPMEAPQVIFLHPAPMHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSS 126
F E YP + P+ F HP++Y +G +CL IL + W PA+TV + + I +L
Sbjct: 65 FSEDYPSKPPKCKFPQ-GFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLL-D 122
Query: 127 SPAKQRPADNDRY 139
P PA D Y
Sbjct: 123 QPNPADPAQTDGY 135
>Os05g0460200 Similar to Ubiquitin carrier protein
Length = 169
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 30 NPPSGFKHKVTD--NLQRWVIEVAGAAGTLYAGETYQLQVDFPEHYPMEAPQVIFLHPAP 87
NP GF + D N+ W + + G TLY G + + FP++YP P V F
Sbjct: 22 NPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMTFPQNYPNSPPSVRFTSEM- 80
Query: 88 MHPHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLSSSPAKQRPA 134
HP++Y +G +C+ IL+ + W+P TV S+ +SI+SML SSP + PA
Sbjct: 81 WHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISML-SSPNDESPA 139
Query: 135 D 135
+
Sbjct: 140 N 140
>Os01g0839700 Similar to Ubiquitin carrier protein
Length = 169
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 17/120 (14%)
Query: 31 PPSGFKHKVTD--NLQRWVIEVAGAAGTLYAGETYQLQVDFPEHYPMEAPQVIFLHPAPM 88
P GF + D N+ W + + G TLY G + + FP++YP P V F
Sbjct: 23 PVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEM-W 81
Query: 89 HPHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLSSSPAKQRPAD 135
HP++Y +G +C+ IL+ + W+P TV S+ +SI+SML S P + PA+
Sbjct: 82 HPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISML-SGPNDESPAN 140
>Os07g0577400 Similar to Constitutive photomorphogenesis protein 10
Length = 202
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 18 NRLQKELAEWQVNPPSGFKHKVTDNLQRWVIEVAGAAGTLYAGETYQLQVDFPEHYPMEA 77
R+QKEL + +N DNL W+ + G G+ Y G + L + FP YP +
Sbjct: 62 KRIQKELMD--LNASDCSAGPKGDNLYHWLSTIIGPQGSPYEGGIFFLDIVFPIDYPFKP 119
Query: 78 PQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSS 126
P V F H ++ S G++ +DIL + WSPA+T+S V ++I +++++
Sbjct: 120 PMVTF-KTRIYHCNVDSTGNLSMDILREGWSPALTISKVLLAIKAIITN 167
>Os01g0925800 Similar to Ubiquitin conjugating enzyme
Length = 195
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 15 IACNRLQKELAEWQVN-PPSGFKHKVTDN--LQRWVIEVAGAAGTLYAGETYQLQVDFPE 71
+ +R+QKEL E + SG + D + +AG GT Y G T+ + + P
Sbjct: 2 VDVSRVQKELTECNRDREVSGVSIALHDGSTISHLTGTIAGPQGTPYEGGTFVIDIRLPG 61
Query: 72 HYPMEAPQVIFLHPAPMHPHIYS-NGHICLDILYDSWSPAMTVSS 115
YP E P++ F+ HP+I S NG ICLDIL D WSPA+T+ +
Sbjct: 62 GYPFEPPKMQFITKV-WHPNISSQNGAICLDILKDQWSPALTLKT 105
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.133 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,167,840
Number of extensions: 244622
Number of successful extensions: 651
Number of sequences better than 1.0e-10: 21
Number of HSP's gapped: 633
Number of HSP's successfully gapped: 21
Length of query: 161
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 68
Effective length of database: 12,179,899
Effective search space: 828233132
Effective search space used: 828233132
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 152 (63.2 bits)