BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0721100 Os02g0721100|AK108167
(234 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0721100 Similar to E2 ubiquitin-conjugating enzyme Ubc... 357 5e-99
Os02g0721500 191 4e-49
Os02g0721200 Ubiquitin-conjugating enzyme, E2 domain contai... 148 3e-36
Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 131 4e-31
Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 129 1e-30
Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a 128 3e-30
Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ub... 128 3e-30
Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b 128 3e-30
Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 ... 128 3e-30
Os07g0577400 Similar to Constitutive photomorphogenesis pro... 100 7e-22
Os01g0673600 Similar to Ubiquitin-conjugating enzyme E2 100 1e-21
Os01g0273100 Similar to Ubiquitin conjugating protein-like ... 87 1e-17
Os01g0925800 Similar to Ubiquitin conjugating enzyme 84 9e-17
Os02g0634800 Ubiquitin-conjugating enzyme, E2 domain contai... 77 1e-14
Os05g0182500 Rad6 (Ubiquitin carrier protein) 77 1e-14
Os07g0166800 Rad6 (Ubiquitin carrier protein) 77 2e-14
Os03g0791800 Rad6 (Ubiquitin carrier protein) 76 3e-14
Os01g0605300 Similar to Likely ubiquitin-conjugating enzyme e2 75 4e-14
Os06g0660700 Similar to Ubiquitin-conjugating enzyme E2S (E... 74 9e-14
D17786 71 7e-13
Os08g0374100 Similar to Ubiquitin-conjugating enzyme E2 M (... 64 7e-11
Os05g0460200 Similar to Ubiquitin carrier protein 64 8e-11
>Os02g0721100 Similar to E2 ubiquitin-conjugating enzyme UbcH5B (Fragment)
Length = 234
Score = 357 bits (915), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 183/234 (78%), Positives = 183/234 (78%)
Query: 1 MGSELPAAAPPQPKXXXXXXXXXXXXXXXELWQFWLDPPPYCRPGPSPVKDHFHWEVVID 60
MGSELPAAAPPQPK ELWQFWLDPPPYCRPGPSPVKDHFHWEVVID
Sbjct: 1 MGSELPAAAPPQPKRSTAAAAVARRRIGRELWQFWLDPPPYCRPGPSPVKDHFHWEVVID 60
Query: 61 GPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKVYHPNIDGKGRMALDIFQDNWSPALT 120
GPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKVYHPNIDGKGRMALDIFQDNWSPALT
Sbjct: 61 GPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKVYHPNIDGKGRMALDIFQDNWSPALT 120
Query: 121 INKLLLCFVSVLFDPLLDRPTNRCIXXXXXXXXXXXXXXXRAWTQKHSSTPIVSHYPPYA 180
INKLLLCFVSVLFDPLLDRPTNRCI RAWTQKHSSTPIVSHYPPYA
Sbjct: 121 INKLLLCFVSVLFDPLLDRPTNRCIAKQYKHEYEAYEEKARAWTQKHSSTPIVSHYPPYA 180
Query: 181 VIGSTPPAVPHFPXXXXXXXXXXXXXXXXXXXXXIPLLMKDESIWRRTMKFFQG 234
VIGSTPPAVPHFP IPLLMKDESIWRRTMKFFQG
Sbjct: 181 VIGSTPPAVPHFPATAARRKAAASSASGSVSSSRIPLLMKDESIWRRTMKFFQG 234
>Os02g0721500
Length = 290
Score = 191 bits (485), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/165 (60%), Positives = 111/165 (67%), Gaps = 3/165 (1%)
Query: 30 ELWQFWLDPPPYCRPGPSPVKDHFHWEVVIDGPAATPYAGGVFPVDVWFP-YDYPFRPPK 88
EL W DPPPY RPGP PV D FHWEVVIDGPA TPYAGG FPVD+ P YPF PK
Sbjct: 37 ELRLLWRDPPPYLRPGPEPVTDPFHWEVVIDGPAGTPYAGGTFPVDIQLPAAGYPFVHPK 96
Query: 89 LFFKTKVYHPNIDGKGRMALDIFQDNWSPALTINKLLLCFVSVLFDPLLDRPTNRCIXXX 148
+ FKT VYHPNID +G M LD ++WS A + LL+ FVSVL+DPLLD P N I
Sbjct: 97 VTFKTLVYHPNIDEEGNMVLD--AESWSCATKLRGLLIGFVSVLYDPLLDYPINYDIAEQ 154
Query: 149 XXXXXXXXXXXXRAWTQKHSSTPIVSHYPPYAVIGSTPPAVPHFP 193
RAWT++ SS P+VSHYPP AV+G TPPAVPHFP
Sbjct: 155 YAYDYERYEAEARAWTREFSSAPVVSHYPPNAVVGRTPPAVPHFP 199
>Os02g0721200 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 249
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 101/189 (53%), Gaps = 27/189 (14%)
Query: 30 ELWQFWLDPPPYCRPGPSPVKDHFHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKL 89
EL WLDPP YCRPGP PV D HWEV+IDGP TPYAGG FPVDVW+P +YPF+PPKL
Sbjct: 43 ELEDLWLDPPAYCRPGPEPVTDLLHWEVIIDGPPGTPYAGGTFPVDVWYPNEYPFQPPKL 102
Query: 90 FFKTKVYHPNIDGKGRMALDIFQDN----WSPALTINKL--------------------- 124
FKTKV +A Q + S N +
Sbjct: 103 TFKTKVKSLAQSLSRSLACVHRQISQLMLQSRTYECNSIAAGVPSEHRRRGADGGGRASR 162
Query: 125 LLCFVSVLFDPLLDRPTNRCIXXXXXXXXXXXXXXXRAWTQKHSSTPIVSHYPPYAVIGS 184
LL FVS+L+DPLLD P N I R WT+++SSTPI SH+ P A+
Sbjct: 163 LLGFVSILYDPLLDYPINDDIAEQYENEYELYEKEAREWTRRYSSTPIASHWLPKAM--R 220
Query: 185 TPPAVPHFP 193
TPPAVPH P
Sbjct: 221 TPPAVPHIP 229
>Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 87/139 (62%), Gaps = 1/139 (0%)
Query: 30 ELWQFWLDPPPYCRPGPSPVKDHFHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKL 89
EL DPP C GP+ +D FHW+ I GP+ +PYAGGVF V++ FP DYPF+PPK+
Sbjct: 9 ELMDLRKDPPTSCSAGPAG-EDLFHWQATIMGPSDSPYAGGVFFVNIHFPPDYPFKPPKV 67
Query: 90 FFKTKVYHPNIDGKGRMALDIFQDNWSPALTINKLLLCFVSVLFDPLLDRPTNRCIXXXX 149
F+TKVYHPNI+ G + LDI ++ WSPALTI+K+LL S+L DP D P I
Sbjct: 68 NFQTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHVY 127
Query: 150 XXXXXXXXXXXRAWTQKHS 168
RAWTQK++
Sbjct: 128 KSQRPRYEETARAWTQKYA 146
>Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 86/139 (61%), Gaps = 1/139 (0%)
Query: 30 ELWQFWLDPPPYCRPGPSPVKDHFHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKL 89
EL DPP C GP+ +D FHW+ I GP +PYAGGVF V++ FP DYPF+PPK+
Sbjct: 9 ELKDLQKDPPTSCSAGPAG-EDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKV 67
Query: 90 FFKTKVYHPNIDGKGRMALDIFQDNWSPALTINKLLLCFVSVLFDPLLDRPTNRCIXXXX 149
FKTKV+HPNI+ G + LDI ++ WSPALTI+K+LL S+L DP D P I
Sbjct: 68 SFKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 127
Query: 150 XXXXXXXXXXXRAWTQKHS 168
R+WTQK++
Sbjct: 128 KTDRPKYETTARSWTQKYA 146
>Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a
Length = 147
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 84/139 (60%), Gaps = 1/139 (0%)
Query: 30 ELWQFWLDPPPYCRPGPSPVKDHFHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKL 89
EL DPP C GP +D FHW+ I GP+ +PYAGGVF V + FP DYPF+PPK+
Sbjct: 9 ELKDLQKDPPTSCSAGPVG-EDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKV 67
Query: 90 FFKTKVYHPNIDGKGRMALDIFQDNWSPALTINKLLLCFVSVLFDPLLDRPTNRCIXXXX 149
F+TKV+HPNI+ G + LDI +D WSPALTI+K+LL S+L DP D P I
Sbjct: 68 AFRTKVFHPNINSNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 127
Query: 150 XXXXXXXXXXXRAWTQKHS 168
R WTQ+++
Sbjct: 128 KTDRHKYENTARTWTQRYA 146
>Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier
protein)
Length = 148
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 86/139 (61%), Gaps = 1/139 (0%)
Query: 30 ELWQFWLDPPPYCRPGPSPVKDHFHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKL 89
EL DPP C GP +D FHW+ I GP+ +P+AGGVF V++ FP DYPF+PPK+
Sbjct: 9 ELKDLQKDPPTSCSAGPVG-EDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKV 67
Query: 90 FFKTKVYHPNIDGKGRMALDIFQDNWSPALTINKLLLCFVSVLFDPLLDRPTNRCIXXXX 149
F+TKV+HPNI+ G + LDI ++ WSPALTI+K+LL S+L DP D P I
Sbjct: 68 SFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 127
Query: 150 XXXXXXXXXXXRAWTQKHS 168
R+WTQK++
Sbjct: 128 KTDRAKYESTARSWTQKYA 146
>Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b
Length = 148
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 84/139 (60%), Gaps = 1/139 (0%)
Query: 30 ELWQFWLDPPPYCRPGPSPVKDHFHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKL 89
EL DPP C GP +D FHW+ + GP+ +PYAGGVF V + FP DYPF+PPK+
Sbjct: 9 ELKDLQKDPPTSCSAGPV-AEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYPFKPPKV 67
Query: 90 FFKTKVYHPNIDGKGRMALDIFQDNWSPALTINKLLLCFVSVLFDPLLDRPTNRCIXXXX 149
KTKV+HPNI+ G + LDI ++ WSPALTI+K+LL S+L DP D P I
Sbjct: 68 ALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 127
Query: 150 XXXXXXXXXXXRAWTQKHS 168
R+WTQK++
Sbjct: 128 KTDRAKYESTARSWTQKYA 146
>Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 kDa 9 (EC 6.3.2.19)
(Ubiquitin- protein ligase 9) (Ubiquitin carrier protein
9) (UBCAT4B)
Length = 148
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
Query: 30 ELWQFWLDPPPYCRPGPSPVKDHFHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKL 89
EL DPP C GP D FHW+ I GP +PY+GGVF V + FP DYPF+PPK+
Sbjct: 9 ELKDLQRDPPTSCSAGPVS-DDMFHWQATIMGPNDSPYSGGVFLVTIHFPPDYPFKPPKV 67
Query: 90 FFKTKVYHPNIDGKGRMALDIFQDNWSPALTINKLLLCFVSVLFDPLLDRPTNRCIXXXX 149
FKTKV+HPNI+ G + LDI +D WSPALTI+K+LL S+L DP D P I
Sbjct: 68 AFKTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMC 127
Query: 150 XXXXXXXXXXXRAWTQKHS 168
R WTQK++
Sbjct: 128 KTDRLRYESTARGWTQKYA 146
>Os07g0577400 Similar to Constitutive photomorphogenesis protein 10
Length = 202
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 42 CRPGPSPVKDHFHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKVYHPNID 101
C GP + +HW I GP +PY GG+F +D+ FP DYPF+PP + FKT++YH N+D
Sbjct: 76 CSAGPKG-DNLYHWLSTIIGPQGSPYEGGIFFLDIVFPIDYPFKPPMVTFKTRIYHCNVD 134
Query: 102 GKGRMALDIFQDNWSPALTINKLLLCFVSVLFDP 135
G +++DI ++ WSPALTI+K+LL +++ +P
Sbjct: 135 STGNLSMDILREGWSPALTISKVLLAIKAIITNP 168
>Os01g0673600 Similar to Ubiquitin-conjugating enzyme E2
Length = 153
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
Query: 30 ELWQFWLDPPPYCRPGPSPVKDHFHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKL 89
E + +P P PS ++ ++ V+I GPA +PY GGVF ++++ P +YP PK+
Sbjct: 13 ETQRLLSEPAPGISASPSE-ENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMAAPKV 71
Query: 90 FFKTKVYHPNIDGKGRMALDIFQDNWSPALTINKLLLCFVSVLFDPLLDRPTNRCIXXXX 149
F TK+YHPNID GR+ LDI +D WSPAL I +LL ++L P D P + I
Sbjct: 72 RFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHW 131
Query: 150 XXXXXXXXXXXRAWTQKHSS 169
+ WT+ ++S
Sbjct: 132 KANEAEAVETAKEWTRLYAS 151
>Os01g0273100 Similar to Ubiquitin conjugating protein-like
(Ubiquitin-conjugating enzyme) (Ubiquitinating enzyme)
Length = 191
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 54/90 (60%)
Query: 53 FHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKVYHPNIDGKGRMALDIFQ 112
F W I G AAT Y G + + + FP +YP++PPK+ F+T +HPN+D G + LDI Q
Sbjct: 77 FSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCFHPNVDAHGNICLDILQ 136
Query: 113 DNWSPALTINKLLLCFVSVLFDPLLDRPTN 142
D WS A + +LL S+L +P D P N
Sbjct: 137 DKWSSAYDVRTILLSIQSLLGEPNNDSPLN 166
>Os01g0925800 Similar to Ubiquitin conjugating enzyme
Length = 195
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 54 HWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKVYHPNIDGK-GRMALDIFQ 112
H I GP TPY GG F +D+ P YPF PPK+ F TKV+HPNI + G + LDI +
Sbjct: 35 HLTGTIAGPQGTPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISSQNGAICLDILK 94
Query: 113 DNWSPALTINKLLLCFVSVLFDPLLDRPTNRCIXXXXXXXXXXXXXXXRAWTQ---KHSS 169
D WSPALT+ LL ++L P D P + + R WT+ K+SS
Sbjct: 95 DQWSPALTLKTALLSLQALLSAPAPDDPQDAVVAQQYLRDYSTFSATARYWTEAFAKNSS 154
Query: 170 TPIVSHYPPYAVIG 183
T + +G
Sbjct: 155 TGMEEKVQKLVEMG 168
>Os02g0634800 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 157
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 53 FHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKVYHPNIDGK-GRMALDIF 111
F W +I GP+ TP+ GGVF + P YP PP++ F TK++HPN+ K G + LDI
Sbjct: 35 FKWTALIKGPSETPFEGGVFQLAFSIPEQYPLLPPQVRFLTKIFHPNVHFKTGEICLDIL 94
Query: 112 QDNWSPALTINKLLLCFVSVLFDPLLDRPTN 142
++ WSPA T+ + ++++ P D P N
Sbjct: 95 KNAWSPAWTLQSVCRAIIALMAHPEPDSPLN 125
>Os05g0182500 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%)
Query: 36 LDPPPYCRPGPSPVKDHFHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKV 95
+ PP G + W VI GP TP+ GG F + + F DYP +PP + F +++
Sbjct: 17 MQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM 76
Query: 96 YHPNIDGKGRMALDIFQDNWSPALTINKLLLCFVSVLFDPLLDRPTN 142
+HPNI G + LDI Q+ WSP + +L S+L DP + P N
Sbjct: 77 FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 123
>Os07g0166800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 55 WEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKVYHPNIDGKGRMALDIFQDN 114
W VI GP TP+ GG F + + F DYP +PP + F ++++HPNI G + LDI Q+
Sbjct: 36 WNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ 95
Query: 115 WSPALTINKLLLCFVSVLFDPLLDRPTN 142
WSP + +L S+L DP + P N
Sbjct: 96 WSPIYDVAAILTSIQSLLCDPNPNSPAN 123
>Os03g0791800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 55 WEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKVYHPNIDGKGRMALDIFQDN 114
W VI GP TP+ GG F + + F DYP +PP + F ++++HPNI G + LDI Q+
Sbjct: 36 WNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPVVRFVSRMFHPNIYADGSICLDILQNQ 95
Query: 115 WSPALTINKLLLCFVSVLFDPLLDRPTN 142
WSP + +L S+L DP + P N
Sbjct: 96 WSPIYDVAAILTSIQSLLCDPNPNSPAN 123
>Os01g0605300 Similar to Likely ubiquitin-conjugating enzyme e2
Length = 556
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 33 QFWLDPPPY-----CRPGPSPVKDHFHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPP 87
+ L+ PP+ S + +E I GP T Y+ GVF + + P YPF+PP
Sbjct: 16 KLLLNDPPHGVSLNLSGDESALSSLLSFEARIQGPDETVYSKGVFVLKIQIPERYPFQPP 75
Query: 88 KLFFKTKVYHPNIDGKGRMALDIF----QDNWSPALTINKLLLCFVSVLFDPLLDRPTNR 143
+ F T +YHPNID GR+ LDI + W P+L I +L +L DP D
Sbjct: 76 NVTFVTPIYHPNIDNGGRICLDILNLPPKGAWQPSLNIATVLTSIGLLLSDPNPDDGLMA 135
Query: 144 CIXXXXXXXXXXXXXXXRAWTQKHSS 169
I R+WT+K+++
Sbjct: 136 EISREYKYNRQVFDINARSWTEKYAN 161
>Os06g0660700 Similar to Ubiquitin-conjugating enzyme E2S (EC 6.3.2.19)
(Ubiquitin-conjugating enzyme E2-24 kDa)
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
(E2-EPF5)
Length = 252
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%)
Query: 59 IDGPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKVYHPNIDGKGRMALDIFQDNWSPA 118
I+GPA TPY GVF + + D+P PPK FF TK++HPNI G + ++ + +W+P+
Sbjct: 46 IEGPAGTPYENGVFRMKLLLSRDFPQSPPKGFFLTKIFHPNIATSGEICVNTLKKDWNPS 105
Query: 119 LTINKLLLCFVSVLFDPLLDRPTNRCIXXXXXXXXXXXXXXXRAWTQKHSSTP 171
L + +LL +L +P + N R +T H+ P
Sbjct: 106 LGLRHVLLVVRCLLIEPFPESALNEQAGKLLLENYEEYARHARLYTSIHALKP 158
>D17786
Length = 103
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 83 PFRPPKLFFKTKVYHPNIDGKGRMALDIFQDNWSPALTINKLLLCFVSVLFDPLLDRP 140
PF+PPK F+TKV+HPNI+ G + LDI ++ WSPALTI+K+LL S+L DP D P
Sbjct: 26 PFKPPKSSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNGDDP 83
>Os08g0374100 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 183
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 46 PSPVKDHFHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKVYHPNIDGKGR 105
P+ D ++EV I P Y GG F P YP PPK+ KTKVYHPNID +G
Sbjct: 52 PNGKDDLMNFEVTIR-PDEGYYVGGKFIFTFQVPPAYPHEPPKVKCKTKVYHPNIDLEGN 110
Query: 106 MALDIFQDNWSPALTINKLLLCFVSVLFDPLLDRPTN 142
+ L+I +++W P L +N ++ + P + P N
Sbjct: 111 VCLNILREDWKPVLNVNTIVYGLNLLFSQPNDEDPLN 147
>Os05g0460200 Similar to Ubiquitin carrier protein
Length = 169
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 53 FHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKVYHPNIDGKGRMALDIFQ 112
F W+V I GP T Y GG F + FP +YP PP + F ++++HPN+ GR+ + I
Sbjct: 38 FEWQVTIIGPPDTLYDGGYFNAIMTFPQNYPNSPPSVRFTSEMWHPNVYPDGRVCISILH 97
Query: 113 -------------DNWSPALTINKLLLCFVSVLFDPLLDRPTN 142
+ W+P T+ ++L +S+L P + P N
Sbjct: 98 PPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPAN 140
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.143 0.505
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,125,740
Number of extensions: 403527
Number of successful extensions: 720
Number of sequences better than 1.0e-10: 27
Number of HSP's gapped: 709
Number of HSP's successfully gapped: 28
Length of query: 234
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 136
Effective length of database: 11,918,829
Effective search space: 1620960744
Effective search space used: 1620960744
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 154 (63.9 bits)