BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0206500 Os08g0206500|Os08g0206500
(484 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0206500 Similar to Beta-expansin precursor 694 0.0
Os02g0170500 Histone-fold domain containing protein 166 3e-41
Os06g0667100 Similar to Nuclear Y/CCAAT-box binding factor ... 159 4e-39
Os08g0496500 Histone-fold domain containing protein 144 2e-34
Os09g0480700 Similar to Transcription factor Hap5a-like pro... 144 2e-34
Os10g0555600 Beta-expansin precursor 143 3e-34
Os03g0251350 Histone-fold domain containing protein 139 3e-33
AK064012 121 1e-27
Os10g0556100 beta-expansin EXPB4 [Oryza sativa (japonica cu... 120 2e-27
Os10g0555900 Beta-expansin precursor 104 1e-22
Os03g0102700 Beta-expansin precursor 101 1e-21
Os04g0683400 97 3e-20
Os10g0555700 Beta-expansin 92 7e-19
Os03g0102500 Similar to Beta-expansin precursor (Fragment) 85 1e-16
Os05g0246300 Expansin/Lol pI family protein 81 2e-15
Os02g0658800 Beta-expansin 80 3e-15
Os01g0580400 Histone-fold domain containing protein 78 1e-14
Os01g0102400 Histone-fold domain containing protein 77 4e-14
Os03g0106800 Beta-expansin precursor (Beta-expansin OsEXPB10) 75 9e-14
Os04g0552000 Expansin/Lol pI family protein 75 1e-13
Os01g0346900 Histone-fold domain containing protein 73 6e-13
Os03g0645000 Beta-expansin 73 6e-13
Os10g0548600 Beta-expansin precursor 68 1e-11
>Os08g0206500 Similar to Beta-expansin precursor
Length = 484
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/484 (73%), Positives = 355/484 (73%)
Query: 1 MAKPGLNDKLRHSGIIDIHFRREGSNPVYFAVLVKYEDLDGDVVQVDLMESKSAYGGAIG 60
MAKPGLNDKLRHSGIIDIHFRREGSNPVYFAVLVKYEDLDGDVVQVDLMESKSAYGGAIG
Sbjct: 1 MAKPGLNDKLRHSGIIDIHFRREGSNPVYFAVLVKYEDLDGDVVQVDLMESKSAYGGAIG 60
Query: 61 VWTPMRESWGSASAVTSARPFVTNNVIPAIWSRIXXXXXXXXXXXXXXXXXXHCXXXXXX 120
VWTPMRESWGSASAVTSARPFVTNNVIPAIWSRI HC
Sbjct: 61 VWTPMRESWGSASAVTSARPFVTNNVIPAIWSRIAPSLPPSPLPRRPRSALAHCRASPAS 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXHLLLSGIPAAALVVACPNLNDLDFSNDHYGSTSGM 180
HLLLSGIPAAALVVACPNLNDLDFSNDHYGSTSGM
Sbjct: 121 VSPSARASPTPPSPRSPPHRPSRSRHLLLSGIPAAALVVACPNLNDLDFSNDHYGSTSGM 180
Query: 181 RRRRRWPSCVXXXXXXXXXXXXRYSITFSAYIVVLRTQEAYVQILQQLHRSTSLEMDPHS 240
RRRRRWPSCV RYSITFSAYIVVLRTQEAYVQILQQLHRSTSLEMDPHS
Sbjct: 181 RRRRRWPSCVGFWGGFGDGDGDRYSITFSAYIVVLRTQEAYVQILQQLHRSTSLEMDPHS 240
Query: 241 HKKAHEGLIGDNPDAYAVTTYQPVLMXXXXXXXXXXXXXXXXXXXXXXXMQLPXXXXXXX 300
HKKAHEGLIGDNPDAYAVTTYQPVLM MQLP
Sbjct: 241 HKKAHEGLIGDNPDAYAVTTYQPVLMVEPSAAAAFPPAPQVAPAYPVNPMQLPEHQQHAI 300
Query: 301 XXXXXXXXXXXXXXXXFWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPA 360
FWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPA
Sbjct: 301 QQVQQLQQQQKEQLQAFWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPA 360
Query: 361 LFAKACEMFILDMTLRSWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMKDDG 420
LFAKACEMFILDMTLRSWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMKDDG
Sbjct: 361 LFAKACEMFILDMTLRSWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMKDDG 420
Query: 421 MGSQAASMVSPYTSGGMGFSFDLYPNQHHLAYMXXXXXXXXXXXXXXXXXXXXXXDSDGG 480
MGSQAASMVSPYTSGGMGFSFDLYPNQHHLAYM DSDGG
Sbjct: 421 MGSQAASMVSPYTSGGMGFSFDLYPNQHHLAYMWPPQEQQEQWPPQEQQEQKQKQDSDGG 480
Query: 481 GQDE 484
GQDE
Sbjct: 481 GQDE 484
>Os02g0170500 Histone-fold domain containing protein
Length = 259
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 100/128 (78%), Gaps = 2/128 (1%)
Query: 317 FWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLR 376
FWA+QM E+EQ T+FK +LPLARIKKIMKADEDV+MI+ EAP +FAKACE+FIL++TLR
Sbjct: 87 FWANQMEEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELTLR 146
Query: 377 SWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMKDDGMGSQAASMVSPYTSGG 436
SW HTEE +RRTLQ++D+ A I +TDI+DFLVDI+ D+MK++G+G + P GG
Sbjct: 147 SWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDEMKEEGLGLPRVGL--PPNVGG 204
Query: 437 MGFSFDLY 444
++ Y
Sbjct: 205 AADTYPYY 212
>Os06g0667100 Similar to Nuclear Y/CCAAT-box binding factor C subunit NF-YC
Length = 250
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 72/134 (53%), Positives = 102/134 (76%), Gaps = 6/134 (4%)
Query: 317 FWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLR 376
FWA+++ ++EQ T+FK +LPLARIKKIMKADEDV+MI+ EAP +FAKACE+FIL++TLR
Sbjct: 83 FWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEIFILELTLR 142
Query: 377 SWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMKDDGMGSQAASMVSPYTSGG 436
SW HTEE +RRTLQ++D+ A I +TD++DFLVDI+ D +K++G+G A +
Sbjct: 143 SWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLKEEGVGLPRAGLPP------ 196
Query: 437 MGFSFDLYPNQHHL 450
+G D YP +++
Sbjct: 197 LGVPADSYPYGYYV 210
>Os08g0496500 Histone-fold domain containing protein
Length = 205
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 64/95 (67%), Positives = 79/95 (83%)
Query: 317 FWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLR 376
FWA+Q E+E T+FK NLPLARIKKIMKADEDV+MIA EAP +FA+ACEMFIL++T R
Sbjct: 72 FWAEQYREIEHTTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHR 131
Query: 377 SWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDII 411
W H EE +RRTLQ+SD+ A I +T++FDFLVDI+
Sbjct: 132 GWAHAEENKRRTLQKSDIAAAIARTEVFDFLVDIV 166
>Os09g0480700 Similar to Transcription factor Hap5a-like protein
Length = 168
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 64/95 (67%), Positives = 79/95 (83%)
Query: 317 FWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLR 376
FWA+Q E+E T+FK NLPLARIKKIMKADEDV+MIA EAP +FA+ACEMFIL++T R
Sbjct: 34 FWAEQYREIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHR 93
Query: 377 SWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDII 411
W H EE +RRTLQ+SD+ A I +T++FDFLVDI+
Sbjct: 94 GWAHAEENKRRTLQKSDIAAAIARTEVFDFLVDIV 128
>Os10g0555600 Beta-expansin precursor
Length = 275
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/123 (63%), Positives = 81/123 (65%), Gaps = 31/123 (25%)
Query: 1 MAKPGLNDKLRHSGIIDIHFRR---------------EGSNPVYFAVLVKYEDLDGDVVQ 45
MAKPGLNDKLRHSGIIDI FRR EGSNPVYFAVLV+YEDLDGDVVQ
Sbjct: 141 MAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVYFAVLVEYEDLDGDVVQ 200
Query: 46 VDLMESKSAYGGAIGVWTPMRESWGSASAV----------------TSARPFVTNNVIPA 89
VDLMESKSAYGGA GVWTPMRESWGS + S + V NNVIPA
Sbjct: 201 VDLMESKSAYGGATGVWTPMRESWGSIWRLDSNHRLQAPFSLRIRSDSGKTLVANNVIPA 260
Query: 90 IWS 92
WS
Sbjct: 261 NWS 263
>Os03g0251350 Histone-fold domain containing protein
Length = 246
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 84/105 (80%), Gaps = 2/105 (1%)
Query: 317 FWADQMAEVEQMT--EFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMT 374
FWA Q E E+ + +FK LPLARIKKIMKADEDV+MI+ EAP LFAKACE+FIL++T
Sbjct: 49 FWAYQRQEAERASASDFKNHQLPLARIKKIMKADEDVRMISAEAPVLFAKACELFILELT 108
Query: 375 LRSWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMKDD 419
+RSW H EE +RRTLQR+DV A I +TD+FDFLVDI+ ++ K++
Sbjct: 109 IRSWLHAEENKRRTLQRNDVAAAIARTDVFDFLVDIVPREEAKEE 153
>AK064012
Length = 459
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 75/125 (60%), Gaps = 31/125 (24%)
Query: 1 MAKPGLNDKLRHSGIIDIHFRR---------------EGSNPVYFAVLVKYEDLDGDVVQ 45
+AKPGLNDKLRHSGIIDI F R E SNPVYFAVLV+YED DGDVVQ
Sbjct: 152 LAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQ 211
Query: 46 VDLMESKSAYGGAIGVWTPMRESWGSASAV----------------TSARPFVTNNVIPA 89
VDLMESK+A+G G WTPMRESWGS + S + V NNVIPA
Sbjct: 212 VDLMESKTAHGPPTGRWTPMRESWGSIWRLDTNHRLQAPFSIRIRNESGKTLVANNVIPA 271
Query: 90 IWSRI 94
W +
Sbjct: 272 YWRPV 276
>Os10g0556100 beta-expansin EXPB4 [Oryza sativa (japonica cultivar-group)]
Length = 286
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 74/122 (60%), Gaps = 31/122 (25%)
Query: 1 MAKPGLNDKLRHSGIIDIHFRR---------------EGSNPVYFAVLVKYEDLDGDVVQ 45
+AKPGLNDKLRHSGIIDI F R E SNPVYFAVLV+YED DGDVVQ
Sbjct: 152 LAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQ 211
Query: 46 VDLMESKSAYGGAIGVWTPMRESWGSASAV----------------TSARPFVTNNVIPA 89
VDLMESK+A+G G WTPMRESWGS + S + V NNVIPA
Sbjct: 212 VDLMESKTAHGPPTGRWTPMRESWGSIWRLDTNHRLQAPFSIRIRNESGKTLVANNVIPA 271
Query: 90 IW 91
W
Sbjct: 272 NW 273
>Os10g0555900 Beta-expansin precursor
Length = 268
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 70/123 (56%), Gaps = 37/123 (30%)
Query: 1 MAKPGLNDKLRHSGIIDIHFRR---------------EGSNPVYFAVLVKYEDLDGDVVQ 45
MAKPG ND+LRH+GIIDI F+R EGSNPVYFAVLV+YED DGDVVQ
Sbjct: 139 MAKPGQNDQLRHAGIIDIQFKRVPCNFPGLKVTFHVEEGSNPVYFAVLVEYEDGDGDVVQ 198
Query: 46 VDLMESKSAYGGAIGVWTPMRESWGSASAV----------------TSARPFVTNNVIPA 89
VDLME+ S WTPMRESWGS + S + V + VIPA
Sbjct: 199 VDLMEANSQ------SWTPMRESWGSIWRLDSNHRLTAPFSLRITNESGKQLVASQVIPA 252
Query: 90 IWS 92
W+
Sbjct: 253 NWA 255
>Os03g0102700 Beta-expansin precursor
Length = 327
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 71/126 (56%), Gaps = 35/126 (27%)
Query: 1 MAKPGLNDKLRHSGIIDIHFRR---------------EGSNPVYFAVLVKYEDLDGDVVQ 45
MAK ND+LRH+GIIDI FRR +GSNPVY A+LV+YE+ DGDVVQ
Sbjct: 189 MAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQ 248
Query: 46 VDLMESKSAYGGA----IGVWTPMRESWGSASAVTSARP----------------FVTNN 85
VDLMES+ + GG GVWTPMRESWGS + + P + +
Sbjct: 249 VDLMESRYSTGGVDGTPTGVWTPMRESWGSIWRLDTNHPLQGPFSLRITNESGKTLIADQ 308
Query: 86 VIPAIW 91
VIPA W
Sbjct: 309 VIPADW 314
>Os04g0683400
Length = 125
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 14/93 (15%)
Query: 336 LPLARIKKIMK--------------ADEDVKMIAGEAPALFAKACEMFILDMTLRSWQHT 381
LPLARIKKIMK +MI+GEAP +F+KACE+FI ++T R+W T
Sbjct: 24 LPLARIKKIMKRSAGDSSVVDGGGGGGGGARMISGEAPVVFSKACELFIAELTRRAWAAT 83
Query: 382 EEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDD 414
EG+RRT+ + DV A ++ TD+FDFLVD++T D
Sbjct: 84 LEGKRRTVHKEDVAAAVQNTDLFDFLVDVVTAD 116
>Os10g0555700 Beta-expansin
Length = 261
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 57/86 (66%), Gaps = 16/86 (18%)
Query: 1 MAKPGLNDKLRHSGIIDIHFRR---------------EGSNPVYFAVLVKYEDLDGDVVQ 45
MA+PGLND+LRH+GIIDI FRR GSNPVY AVLV++ + DG VVQ
Sbjct: 128 MARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVYLAVLVEFANKDGTVVQ 187
Query: 46 VDLMESKSAYGGAIGVWTPMRESWGS 71
+D+MES + G VWTPMR SWGS
Sbjct: 188 LDVMESLPS-GKPTRVWTPMRRSWGS 212
>Os03g0102500 Similar to Beta-expansin precursor (Fragment)
Length = 276
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 53/86 (61%), Gaps = 19/86 (22%)
Query: 1 MAKPGLNDKLRHSGIIDIHFRR---------------EGSNPVYFAVLVKYEDLDGDVVQ 45
+AKPG D LR +GIID+ F R EGS+PVY AVLV+YE+ DGDV Q
Sbjct: 145 LAKPGRADDLRRAGIIDVQFARVPCEFPGLKVGFHVEEGSSPVYLAVLVEYENGDGDVAQ 204
Query: 46 VDLMESKSAYGGAIGVWTPMRESWGS 71
VDL E+ G G WTPMRESWGS
Sbjct: 205 VDLKEA----GAGGGRWTPMRESWGS 226
>Os05g0246300 Expansin/Lol pI family protein
Length = 264
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 64/122 (52%), Gaps = 36/122 (29%)
Query: 1 MAKPGLNDKLRHSGIIDIHFRR---------------EGSNPVYFAVLVKYEDLDGDVVQ 45
MA PG D+LR +G++ I + R GSNP YFAVLVKYE+ DGD+
Sbjct: 136 MANPGQADQLRAAGVLQIQYNRVPCNWGGVMLTFAVDAGSNPSYFAVLVKYENGDGDLSG 195
Query: 46 VDLMESKSAYGGAIGVWTPMRESWG-----SASAV-----------TSARPFVTNNVIPA 89
+DLM++ GA WTPM++SWG SA A +S + V +NVIP+
Sbjct: 196 MDLMQT-----GAGAAWTPMQQSWGAVWKLSAGAALQAPLSIRLTSSSGKTLVASNVIPS 250
Query: 90 IW 91
W
Sbjct: 251 GW 252
>Os02g0658800 Beta-expansin
Length = 292
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 62/124 (50%), Gaps = 40/124 (32%)
Query: 1 MAKPGLNDKLRHSGIIDIHFRR---------------EGSNPVYFAVLVKYEDLDGDVVQ 45
MAKPG+ DKLR +GI+ + +RR +G+NP YF VL+++ED DGD+
Sbjct: 163 MAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNA 222
Query: 46 VDLMESKSAYGGAIGVWTPMRESWG------SASAVTSARPF------------VTNNVI 87
VDLME+ WTPM ++WG S + PF V NNVI
Sbjct: 223 VDLMEAGCG-------WTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGKVLVANNVI 275
Query: 88 PAIW 91
PA W
Sbjct: 276 PASW 279
>Os01g0580400 Histone-fold domain containing protein
Length = 442
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 60/101 (59%)
Query: 317 FWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLR 376
FW D+ E+E +F +P+AR+KKI+ + + M+ + PA +K CE+F+ ++ +R
Sbjct: 25 FWRDRQKEIETTKDFSEHAIPMARLKKIVSSQKGNMMMTFDMPAFLSKMCELFVQELAVR 84
Query: 377 SWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMK 417
+W + R + +D+ I T+ +DFLVDI+ + ++K
Sbjct: 85 AWASAQSHNRCIILDTDIAKAIASTESYDFLVDILHNHRVK 125
>Os01g0102400 Histone-fold domain containing protein
Length = 421
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 59/101 (58%)
Query: 317 FWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLR 376
FW D+ E+E +F +P+AR+KKI + + M++ + PA +K CE+F+ ++ +R
Sbjct: 25 FWRDRQKEIETTKDFSEHAIPMARLKKIASSQKGNMMMSFDMPAFLSKMCELFVQELAVR 84
Query: 377 SWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMK 417
+W + R + +D+ I T+ +DFLVDI+ + + K
Sbjct: 85 AWASAQSHNRCIILDTDIAEAIASTESYDFLVDILHNHREK 125
>Os03g0106800 Beta-expansin precursor (Beta-expansin OsEXPB10)
Length = 267
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 61/123 (49%), Gaps = 38/123 (30%)
Query: 1 MAKPGLNDKLRHSGIIDIHFRR----------------EGSNPVYFAVLVKYEDLDGDVV 44
MAK G +++LR +GIID+ FRR +GSNP YFAVLVKY DGDVV
Sbjct: 138 MAKEGKDEELRKAGIIDMQFRRVRCKYPGETKVTFHVEKGSNPNYFAVLVKYVGGDGDVV 197
Query: 45 QVDLMESKSAYGGAIGVWTPMRESWGSASAVTSARP----------------FVTNNVIP 88
+V+L E S W P+ ESWG+ + + +P V N+VIP
Sbjct: 198 KVELKEKGSEE------WKPLNESWGAIWRIDTPKPLKGPFSLRVTTESDQKLVANDVIP 251
Query: 89 AIW 91
W
Sbjct: 252 DNW 254
>Os04g0552000 Expansin/Lol pI family protein
Length = 264
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 64/122 (52%), Gaps = 36/122 (29%)
Query: 1 MAKPGLNDKLRHSGIIDIHFRRE---------------GSNPVYFAVLVKYEDLDGDVVQ 45
MA PG D+LR +G++ I + R GSNP YFAVLVKYE+ DGD+
Sbjct: 136 MANPGQADQLRAAGVLQIQYNRVPCNWGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSG 195
Query: 46 VDLMESKSAYGGAIGVWTPMRESWG------SASAV----------TSARPFVTNNVIPA 89
V+LM++ GA WT M++SWG + SA+ +S + V +NVIP+
Sbjct: 196 VELMQT-----GAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTSSSGKTLVASNVIPS 250
Query: 90 IW 91
W
Sbjct: 251 GW 252
>Os01g0346900 Histone-fold domain containing protein
Length = 444
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%)
Query: 317 FWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLR 376
FW D+ E+E +F +P+AR+KKI+ + + M+ + PA +K CE+F+ ++ R
Sbjct: 25 FWRDRQKEIEMTKDFSEHMIPMARLKKIVSSQKGNMMMTFDMPAFLSKMCELFVQELAAR 84
Query: 377 SWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMK 417
+W + R + D+ + T+ +DFLVDI+ + +K
Sbjct: 85 AWACAQSHNRCIILDMDIAEAVASTESYDFLVDILHNHSVK 125
>Os03g0645000 Beta-expansin
Length = 313
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 34/123 (27%)
Query: 1 MAKPGLNDKLRHSGIIDIHFRR---------------EGSNPVYFAVLVKYEDLDGDVVQ 45
MA+PG D+LR +G++ I + R GSNP Y A+LV+Y+D D D+
Sbjct: 147 MARPGQADQLRGAGLLQIQYTRVECEWTGVGLTFVVDSGSNPNYLALLVEYDDNDSDLAA 206
Query: 46 VDLMESKSAYGGAIGVWTPMRESWG------SASAV----------TSARPFVTNNVIPA 89
VD+M + GA G W PM++SWG S SA+ +S + FV +N IPA
Sbjct: 207 VDIMPIGA---GASGSWIPMQQSWGAVWRLNSGSALQGPFSVRLTFSSGQMFVASNAIPA 263
Query: 90 IWS 92
W+
Sbjct: 264 GWN 266
>Os10g0548600 Beta-expansin precursor
Length = 269
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 22/97 (22%)
Query: 1 MAKPGLNDKLRHSGIIDIHFRR----------------EGSNPVYFAVLVKYEDLDGDVV 44
MA PG +LR +GIID+ FRR +GSNP Y AVLVK+ DGDV+
Sbjct: 140 MACPGKETELRKAGIIDMQFRRVRCKYPGGQKVTFHVEKGSNPNYLAVLVKFVADDGDVI 199
Query: 45 QVDLMESKSAYGGAIGVWTPMRESWGSASAVTSARPF 81
Q+DL E+ + W PM+ SWG+ + +A P
Sbjct: 200 QMDLQEA------GLPAWRPMKLSWGAIWRMDTATPL 230
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,446,128
Number of extensions: 421496
Number of successful extensions: 1054
Number of sequences better than 1.0e-10: 24
Number of HSP's gapped: 1027
Number of HSP's successfully gapped: 24
Length of query: 484
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 379
Effective length of database: 11,553,331
Effective search space: 4378712449
Effective search space used: 4378712449
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)