BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0764600 Os03g0764600|AK105625
(348 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0764600 Homeodomain-like containing protein 502 e-142
Os07g0119300 Twin-arginine translocation pathway signal dom... 201 9e-52
Os12g0586300 Similar to Transfactor-like protein 138 5e-33
Os01g0176700 Homeodomain-like containing protein 124 8e-29
Os02g0325600 Similar to Phosphate starvation response regul... 117 1e-26
Os03g0329900 Similar to Phosphate starvation regulator prot... 72 9e-13
Os07g0685300 Similar to Phosphate starvation regulator prot... 71 1e-12
Os03g0325500 Similar to Phosphate starvation regulator prot... 71 1e-12
Os06g0183100 Similar to Two-component response regulator ARR14 71 1e-12
Os02g0796500 Similar to Two-component response regulator AR... 71 1e-12
Os02g0139000 Similar to Phosphate starvation regulator prot... 70 2e-12
Os07g0438800 Similar to Phosphate starvation regulator prot... 69 4e-12
Os02g0700300 Similar to Phosphate starvation response regul... 69 6e-12
Os06g0703900 Homeodomain-like containing protein 68 1e-11
Os02g0174000 Homeodomain-like containing protein 68 1e-11
Os06g0609500 Homeodomain-like containing protein 67 1e-11
Os09g0299200 Homeodomain-like containing protein 67 2e-11
Os05g0488600 Similar to Phosphate starvation regulator prot... 67 2e-11
Os05g0491500 Similar to Transfactor-like protein 65 5e-11
Os04g0600000 Similar to Transfactor-like protein 65 5e-11
>Os03g0764600 Homeodomain-like containing protein
Length = 348
Score = 502 bits (1293), Expect = e-142, Method: Compositional matrix adjust.
Identities = 261/348 (75%), Positives = 261/348 (75%)
Query: 1 MGLDVGEIGMGLDLSLDLKMFXXXXXXXXXXXXXXXXXXXXXCIRSLEEERRKIEMFRRE 60
MGLDVGEIGMGLDLSLDLKMF CIRSLEEERRKIEMFRRE
Sbjct: 1 MGLDVGEIGMGLDLSLDLKMFAARSAVRMAAAAAKEATGVEACIRSLEEERRKIEMFRRE 60
Query: 61 LPLCARLLADVIELMKEEAGXXXXXXXXXXXXXXXXXXTKWMSTAQLWVDSRGSDADSEN 120
LPLCARLLADVIELMKEEAG TKWMSTAQLWVDSRGSDADSEN
Sbjct: 61 LPLCARLLADVIELMKEEAGKRRKDGDDAEAKAEDGDKTKWMSTAQLWVDSRGSDADSEN 120
Query: 121 DRRSGSTSPASRLLGGAEESSSRAVAPPPYFRREERVVLRPAMXXXXXXXXXXXXXXXXX 180
DRRSGSTSPASRLLGGAEESSSRAVAPPPYFRREERVVLRPAM
Sbjct: 121 DRRSGSTSPASRLLGGAEESSSRAVAPPPYFRREERVVLRPAMPLLPPASHRSPPPAAAA 180
Query: 181 XXXXXGDDHRHVVASSFATAVPSPVPAALSLXXXXXXXXXXXRKSRRCWSPELHRQFVAA 240
GDDHRHVVASSFATAVPSPVPAALSL RKSRRCWSPELHRQFVAA
Sbjct: 181 AATAAGDDHRHVVASSFATAVPSPVPAALSLQAQAQQQQQQARKSRRCWSPELHRQFVAA 240
Query: 241 LQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLHNRKSPGTASASHSIVLVGDLW 300
LQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLHNRKSPGTASASHSIVLVGDLW
Sbjct: 241 LQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLHNRKSPGTASASHSIVLVGDLW 300
Query: 301 ASQEVSCSQSGSPQGPLQLXXXXXXXXXXXXXXXCCEDDDKSEGYVRK 348
ASQEVSCSQSGSPQGPLQL CCEDDDKSEGYVRK
Sbjct: 301 ASQEVSCSQSGSPQGPLQLSGSGVAVSAATAGDSCCEDDDKSEGYVRK 348
>Os07g0119300 Twin-arginine translocation pathway signal domain containing
protein
Length = 355
Score = 201 bits (510), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 158/359 (44%), Positives = 189/359 (52%), Gaps = 21/359 (5%)
Query: 1 MGLDVGEIGMGL-DLSLDLKMFXXXXXXXXXXXXXXXXXXXXXCIRSLEEERRKIEMFRR 59
MGLDVGEIG+G DLSLDLKMF CIR LEEE KIE+FRR
Sbjct: 1 MGLDVGEIGVGAADLSLDLKMFAAKSFGRVRGKDTTTTAMGD-CIRRLEEEMGKIEVFRR 59
Query: 60 ELPLCARLLADVIELMKEEAGXXXXXXXXXXXXXXXXXXTKWMSTAQLWV-DSRGSDADS 118
ELPLC RLLADVI++MKEE + WMSTAQLW +S G DA +
Sbjct: 60 ELPLCVRLLADVIDVMKEEV-EKKGGDRKEDEEDAAGDKSNWMSTAQLWTGNSGGPDAAA 118
Query: 119 ENDRRSGST--SPASRLLGGAEESSSRAVAPPPYFRREERVVLRPAMXXXXXXXXXXXXX 176
+ + S ++ GGA S P F R ++ ++R
Sbjct: 119 ADPEKQDKVRISSEAKSNGGAFVGSG-----APAFARPKQSLMRKEDMAYDVRMPDLSLL 173
Query: 177 XXXXXXXXXGDDHRHVVASSFATAVPSPVPA---ALSLXXXXXXXXXXX----RKSRRCW 229
+ R VV S A A + + A ALSL RK+RRCW
Sbjct: 174 SPPASAAAADESRRQVVGFSQAAARAAAMAASGPALSLQPQPQPAAAQQQQQARKTRRCW 233
Query: 230 SPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLHNR-KSPGTAS 288
SP+LHR+FVAALQQLGGPQVATPKQIRE+MKVDGLTNDEVKSHLQKYRLHNR + P +
Sbjct: 234 SPDLHRKFVAALQQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHNRPRVPSSTI 293
Query: 289 ASHSIVLVGDL-WASQEVSCSQSGSPQGPLQLXXXXXXXXXXXXXXXCCEDDD-KSEGY 345
+ IVL+ L + QE S SQSGSP+GPL CE++D +SE Y
Sbjct: 294 VNQPIVLMQGLCYIPQEQSSSQSGSPEGPLHFSGSGMAGGGSSAATVSCEEEDGRSESY 352
>Os12g0586300 Similar to Transfactor-like protein
Length = 395
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/105 (66%), Positives = 78/105 (74%), Gaps = 8/105 (7%)
Query: 223 RKSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLHNRK 282
RK+RRCWSPELHR+FVAALQ+LGGPQ ATPKQIRE+MKVDGLTNDEVKSHLQKYRLH R+
Sbjct: 246 RKARRCWSPELHRRFVAALQRLGGPQAATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRR 305
Query: 283 SPGTASASHSIVLVGD-LW-------ASQEVSCSQSGSPQGPLQL 319
+ VG LW + + S SQSGSPQGPLQL
Sbjct: 306 ASDGGDGGGDHQTVGGRLWPLPPEQYTTSQHSTSQSGSPQGPLQL 350
>Os01g0176700 Homeodomain-like containing protein
Length = 425
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 61/94 (64%), Positives = 73/94 (77%), Gaps = 6/94 (6%)
Query: 223 RKSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLHNRK 282
RK+RRCWSPELHR+FV ALQ LGG QVATPKQIRE+MKVDGLTNDEVKSHLQKYRLH R+
Sbjct: 183 RKARRCWSPELHRRFVNALQILGGAQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRR 242
Query: 283 -----SPGTASASHSIVLVGDLWASQEVSCSQSG 311
+P TA A+ +V++G +W E + +G
Sbjct: 243 PMPSPAPPTA-ATPQLVVLGGIWVPPEYATQAAG 275
>Os02g0325600 Similar to Phosphate starvation response regulator-like protein
Length = 412
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 64/88 (72%), Gaps = 10/88 (11%)
Query: 223 RKSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLHNRK 282
RK RRCW+PELHR+F+ ALQQLGG VATPKQIRE+MKVDGLTNDEVKSHLQKYRLH R+
Sbjct: 234 RKPRRCWAPELHRRFLQALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRR 293
Query: 283 SPGTASAS----------HSIVLVGDLW 300
T +S V+VG +W
Sbjct: 294 PSSTGQSSAAAGVPAPPAPQFVVVGSIW 321
>Os03g0329900 Similar to Phosphate starvation regulator protein (Regulatory
protein of P- starvation acclimation response Psr1)
Length = 428
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 40/54 (74%)
Query: 224 KSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYR 277
K R W+PELH FV A+ +LGG + ATPK + ++MKVDGLT VKSHLQKYR
Sbjct: 216 KQRMRWTPELHESFVHAVNKLGGSEKATPKGVLKLMKVDGLTIYHVKSHLQKYR 269
>Os07g0685300 Similar to Phosphate starvation regulator protein (Regulatory
protein of P- starvation acclimation response Psr1)
Length = 345
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 224 KSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLHNRKS 283
K R W+ ELH +FV A+ QLGGP ATPK I +M + GLT +KSHLQKYRL ++
Sbjct: 52 KPRLKWTSELHERFVEAVNQLGGPDKATPKTIMRLMGIPGLTLYHLKSHLQKYRL-SKNL 110
Query: 284 PGTASASHSIVLVGDLWASQEVSCSQSGSPQGPLQL 319
A+AS + ++G + C +GSP L L
Sbjct: 111 QSQANASRAQGVLGCSTTEIDKPCEGNGSPASHLDL 146
>Os03g0325500 Similar to Phosphate starvation regulator protein (Regulatory
protein of P- starvation acclimation response Psr1)
Length = 354
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 40/55 (72%)
Query: 224 KSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRL 278
K R W+PELH +FV A+ QLGGP+ ATPK I +M V GLT +KSHLQKYRL
Sbjct: 47 KPRLKWTPELHERFVEAVNQLGGPEKATPKTIMRLMGVPGLTLYHLKSHLQKYRL 101
>Os06g0183100 Similar to Two-component response regulator ARR14
Length = 696
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 223 RKSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLHNRK 282
+K R WS ELHR+FVAA+ QLG + A PK+I E+M V+ LT + V SHLQKYRL+ ++
Sbjct: 216 KKPRVVWSVELHRKFVAAVNQLGIDK-AVPKRILELMNVEKLTRENVASHLQKYRLYLKR 274
Query: 283 SPGTASASHSIV 294
AS SIV
Sbjct: 275 LGAVASQQASIV 286
>Os02g0796500 Similar to Two-component response regulator ARR11 (Receiver-like
protein 3)
Length = 688
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 223 RKSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLHNRK 282
+K R WS ELHR+FVAA+ QLG + A PK+I E+M V+ LT + V SHLQKYRL+ ++
Sbjct: 213 KKPRVVWSVELHRKFVAAVNQLGIDK-AVPKRILELMNVEKLTRENVASHLQKYRLYLKR 271
Query: 283 SPGTASASHSIV 294
AS SIV
Sbjct: 272 LSAVASQQVSIV 283
>Os02g0139000 Similar to Phosphate starvation regulator protein (Regulatory
protein of P- starvation acclimation response Psr1)
Length = 467
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 223 RKSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRL 278
K R W+PELH +FV A+ +L GP+ ATPK + ++MKV+GLT +KSHLQKYRL
Sbjct: 264 NKPRLRWTPELHERFVDAVNKLEGPEKATPKGVLKLMKVEGLTIYHIKSHLQKYRL 319
>Os07g0438800 Similar to Phosphate starvation regulator protein (Regulatory
protein of P- starvation acclimation response Psr1)
Length = 426
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%)
Query: 191 HVVASSFATAVPSPVPAALSLXXXXXXXXXXXRKSRRCWSPELHRQFVAALQQLGGPQVA 250
H A+ + + S P+A+++ K+R W+PELH +FV A+ LGG + A
Sbjct: 213 HQSAAQQSVSSQSGEPSAVAIPSPSGASNTSNSKTRMRWTPELHERFVDAVNLLGGSEKA 272
Query: 251 TPKQIREVMKVDGLTNDEVKSHLQKYR 277
TPK + ++MK D LT VKSHLQKYR
Sbjct: 273 TPKGVLKLMKADNLTIYHVKSHLQKYR 299
>Os02g0700300 Similar to Phosphate starvation response regulator-like protein
Length = 288
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 224 KSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRL--HNR 281
K R W+P+LH +FV A+ +LGGP ATPK + +M + GLT +KSHLQKYRL N+
Sbjct: 31 KPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRLGKQNK 90
Query: 282 KSPGTASASHSIVLVGDLWAS 302
K G ++ + G +AS
Sbjct: 91 KDTGLEASRGAFAAHGISFAS 111
>Os06g0703900 Homeodomain-like containing protein
Length = 479
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 54/90 (60%), Gaps = 10/90 (11%)
Query: 223 RKSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLHNRK 282
K+R W+ ELH +FV A+ +L GP+ ATPK + ++MKV+GLT VKSHLQKYRL +
Sbjct: 268 NKARLRWTLELHERFVEAVNKLDGPEKATPKGVLKLMKVEGLTIYHVKSHLQKYRL-AKY 326
Query: 283 SPGTASASHSIVLVGDLWASQEVSCSQSGS 312
P T D AS E SQSGS
Sbjct: 327 LPETKE---------DKKASSEDKKSQSGS 347
>Os02g0174000 Homeodomain-like containing protein
Length = 355
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 224 KSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLHNRKS 283
K R W+ ELH +FV A+ QLGGP ATPK I VM V GLT +KSHLQK+RL K
Sbjct: 16 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL--GKQ 73
Query: 284 PGTASASHSI 293
P + HS+
Sbjct: 74 PHKEFSEHSV 83
>Os06g0609500 Homeodomain-like containing protein
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 224 KSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLHNRKS 283
+ R W+ +LH +FV A+ QLGGP ATPK I +M V GLT VKSHLQKYRL
Sbjct: 47 RQRLRWTDDLHDRFVDAVTQLGGPDRATPKGILRIMGVQGLTIYHVKSHLQKYRLAKYIP 106
Query: 284 PGTASASHSIVL-VGDLWASQEVSC 307
TA + S +GDL A E S
Sbjct: 107 DPTADGAKSDKKDLGDLLADIESSS 131
>Os09g0299200 Homeodomain-like containing protein
Length = 288
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 38/55 (69%)
Query: 224 KSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRL 278
+ R W+ ELH +FV A+ QLGGP ATPK + +M V GLT VKSHLQKYRL
Sbjct: 23 RQRLRWTNELHERFVEAVTQLGGPDRATPKGVLRIMGVQGLTIYHVKSHLQKYRL 77
>Os05g0488600 Similar to Phosphate starvation regulator protein (Regulatory
protein of P- starvation acclimation response Psr1)
Length = 392
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 40/55 (72%)
Query: 224 KSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRL 278
K R W+PELH++FV A+ QLGG + ATPK + +M + GLT +KSHLQKYRL
Sbjct: 25 KPRLKWTPELHQRFVDAVNQLGGAEKATPKTVMRLMGIPGLTLYHLKSHLQKYRL 79
>Os05g0491500 Similar to Transfactor-like protein
Length = 257
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 38/55 (69%)
Query: 224 KSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRL 278
K R W+ +LH +FV A+ QLGGP ATPK + VM V G+T VKSHLQKYRL
Sbjct: 45 KQRLRWTSDLHNRFVDAIAQLGGPDRATPKGVLTVMGVPGITIYHVKSHLQKYRL 99
>Os04g0600000 Similar to Transfactor-like protein
Length = 98
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 224 KSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRL--HNR 281
K R W+P+LH +FV A+ +LGGP ATPK + +M + GLT +KSHLQKYRL ++
Sbjct: 21 KPRLRWTPDLHERFVDAVTRLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRLGRQSK 80
Query: 282 KSPG 285
KS G
Sbjct: 81 KSAG 84
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.131 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,854,892
Number of extensions: 335545
Number of successful extensions: 1248
Number of sequences better than 1.0e-10: 20
Number of HSP's gapped: 1245
Number of HSP's successfully gapped: 20
Length of query: 348
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 246
Effective length of database: 11,709,973
Effective search space: 2880653358
Effective search space used: 2880653358
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 156 (64.7 bits)