Os07g0438800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1).
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Os07g0438800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.25 | 0.177 | 11.2 | -0.0291 | 0.664 | -0.349 | -0.21 | -0.128 | -0.127 | 3.95 | 15.68 | 76 | -- | -- |
| 14.27 | 0.176 | 11.2 | -0.0298 | 0.662 | -0.337 | -0.171 | -- | -0.128 | 3.96 | 14.09 | 76 | -- | -- |
| 14.36 | 0.176 | 11.2 | -0.0283 | 0.66 | -0.345 | -- | -0.00128 | -0.126 | 4 | 13.99 | 76 | -- | -- |
| 14.36 | 0.176 | 11.2 | -0.0282 | 0.66 | -0.345 | -- | -- | -0.126 | 4 | 13.96 | 76 | -- | -- |
| 21.08 | 0.214 | 11.2 | 0.0242 | -- | -0.873 | -- | 0.138 | -0.0621 | -- | -2.683 | 328 | -- | -- |
| 15.97 | 0.187 | 11.2 | -0.0305 | 0.76 | -- | -0.219 | -- | -0.139 | 3.45 | -- | -- | -- | -- |
| 16.12 | 0.188 | 11.2 | -0.0266 | 0.759 | -- | -- | -- | -0.138 | 3.46 | -- | -- | -- | -- |
| 21.12 | 0.214 | 11.2 | 0.0222 | -- | -0.873 | -- | -- | -0.0636 | -- | -3.809 | 326 | -- | -- |
| 14.38 | 0.177 | 11.2 | -- | 0.658 | -0.345 | -- | -- | -0.123 | 4.01 | 13.69 | 76 | -- | -- |
| 48.42 | 0.325 | 11.2 | 0.00544 | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
| 16.14 | 0.188 | 11.2 | -- | 0.759 | -- | -- | -- | -0.135 | 3.46 | -- | -- | -- | -- |
| 21.13 | 0.214 | 11.2 | -- | -- | -0.873 | -- | -- | -0.0661 | -- | -3.991 | 326 | -- | -- |
| 48.43 | 0.325 | 11.2 | -- | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 12.89 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 8 |
| 5 | 12.93 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 8 |
| 6 | 12.99 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 46 | 13.25 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 3 | 16 |
| 55 | 13.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 56 | 13.27 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 58 | 13.28 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 17 |
| 67 | 13.30 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 76 | 13.33 | humidity | 90.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 80 | 13.34 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 88 | 13.35 | temperature | 20.0 | 270 | > th | dose independent | rect. | 8 | 18 |
| 91 | 13.36 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 94 | 13.37 | radiation | 10.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 102 | 13.39 | radiation | 30.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 108 | 13.40 | humidity | 90.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 138 | 13.44 | temperature | 20.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 152 | 13.46 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 154 | 13.47 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 176 | 13.50 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 186 | 13.51 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 11 | 7 |
| 187 | 13.51 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 8 |
| 236 | 13.56 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 241 | 13.56 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 7 |
| 244 | 13.56 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 22 | 17 |
| 295 | 13.59 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 14 | 18 |
| 299 | 13.60 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 350 | 13.64 | humidity | 90.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 363 | 13.64 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 14 | 21 |
| 387 | 13.67 | radiation | 1.0 | 270 | > th | dose independent | sin | 1 | NA |
| 452 | 13.71 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 454 | 13.71 | radiation | 1.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 455 | 13.71 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 503 | 13.74 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 541 | 13.76 | wind | 7.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 565 | 13.77 | radiation | 1.0 | 270 | < th | dose independent | sin | 1 | NA |
| 572 | 13.77 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 573 | 13.77 | temperature | 20.0 | 90 | > th | dose independent | rect. | 22 | 17 |
| 579 | 13.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 18 |
| 590 | 13.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 18 |
| 604 | 13.78 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 20 |
| 605 | 13.78 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 626 | 13.78 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 627 | 13.79 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 629 | 13.79 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 663 | 13.80 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 675 | 13.81 | humidity | 90.0 | 270 | < th | dose independent | sin | 0 | NA |
| 685 | 13.81 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 13 | 5 |
| 692 | 13.82 | humidity | 90.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 720 | 13.83 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 721 | 13.83 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 722 | 13.83 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 724 | 13.83 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 8 |
| 725 | 13.83 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 9 |
| 733 | 13.83 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 741 | 13.84 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 745 | 13.84 | radiation | 30.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 747 | 13.84 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 771 | 13.85 | wind | 7.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 772 | 13.85 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 7 |
| 787 | 13.85 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 802 | 13.86 | radiation | 20.0 | 270 | < th | dose independent | sin | 7 | NA |
| 821 | 13.86 | radiation | 10.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 823 | 13.86 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 22 |
| 841 | 13.87 | radiation | 20.0 | 270 | > th | dose independent | sin | 7 | NA |
| 858 | 13.87 | wind | 9.0 | 270 | < th | dose dependent | rect. | 13 | 8 |
| 876 | 13.88 | radiation | 10.0 | 270 | > th | dose independent | sin | 4 | NA |
| 878 | 13.88 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 880 | 13.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 882 | 13.88 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 883 | 13.88 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 885 | 13.88 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 886 | 13.88 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 899 | 13.88 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 903 | 13.88 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 17 |
| 913 | 13.88 | radiation | 20.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 922 | 13.88 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 12 | 9 |
| 963 | 13.89 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 8 |
| 976 | 13.89 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 22 |
| 981 | 13.90 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 983 | 13.90 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 984 | 13.90 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 987 | 13.90 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 988 | 13.90 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 989 | 13.90 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 995 | 13.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 6 |
| 999 | 13.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 9 |