Os02g0325600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphate starvation response regulator-like protein.
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Os02g0325600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphate starvation response regulator-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 677.61 | 1.22 | 8.78 | -0.678 | 0.876 | -4.19 | 1.35 | 10.9 | -0.601 | 2.57 | 27.09 | 6313 | 22.1 | -- |
| 772.82 | 1.29 | 9.01 | 0.658 | 1.22 | -6.11 | 0.898 | -- | -0.483 | 3.19 | 19.31 | 47520 | 20.8 | -- |
| 680.98 | 1.22 | 8.77 | -0.569 | 0.865 | -4.28 | -- | 11.9 | -0.61 | 3.08 | 27.1 | 6331 | 23.4 | -- |
| 704.61 | 1.24 | 9.08 | -0.995 | 1.38 | -4.46 | -- | -- | -0.905 | 3.43 | 21 | 24346 | 23.7 | -- |
| 723.42 | 1.25 | 8.72 | -0.242 | -- | -4.47 | -- | 13 | -0.483 | -- | 26.9 | 6361 | 23.6 | -- |
| 1172.65 | 1.61 | 9.5 | -5.81 | 1.21 | -- | 0.69 | -- | -2.8 | 3.31 | -- | -- | -- | -- |
| 1174.14 | 1.6 | 9.51 | -5.82 | 1.21 | -- | -- | -- | -2.81 | 3.38 | -- | -- | -- | -- |
| 761.38 | 1.29 | 8.98 | -0.415 | -- | -5.57 | -- | -- | -0.489 | -- | 20.7 | 20921 | 22.7 | -- |
| 696.32 | 1.23 | 9.03 | -- | 1.39 | -5.41 | -- | -- | -0.505 | 3.96 | 20.7 | 23666 | 1.18 | -- |
| 1257.2 | 1.66 | 9.51 | -5.77 | -- | -- | -- | -- | -2.77 | -- | -- | -- | -- | -- |
| 2067.59 | 2.13 | 9.36 | -- | 1.1 | -- | -- | -- | -2.16 | 3.39 | -- | -- | -- | -- |
| 763.23 | 1.29 | 8.97 | -- | -- | -5.63 | -- | -- | -0.543 | -- | 20.8 | 20901 | 22.3 | -- |
| 2135.68 | 2.16 | 9.36 | -- | -- | -- | -- | -- | -2.13 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 651.70 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 5 | 666.66 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 15 | 680.05 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 23 | 2 |
| 18 | 682.61 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 19 | 683.66 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 20 | 683.74 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 21 | 684.31 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 27 | 684.51 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 31 | 685.25 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 9 |
| 34 | 685.63 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 13 | 17 |
| 53 | 687.83 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 2 | 5 |
| 64 | 688.44 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 80 | 689.21 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 12 | NA |
| 94 | 689.89 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 96 | 690.07 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 111 | 690.81 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 6 |
| 132 | 691.75 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 6 |
| 138 | 692.26 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 18 |
| 163 | 693.00 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 245 | 696.28 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 284 | 698.90 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 18 | 22 |
| 297 | 699.42 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 310 | 700.10 | humidity | 90.0 | 43200 | > th | dose dependent | no | NA | NA |
| 322 | 700.50 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 345 | 701.82 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 15 |
| 353 | 702.07 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 12 | 17 |
| 370 | 702.48 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 390 | 703.35 | humidity | 90.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 391 | 703.43 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 440 | 705.54 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 453 | 705.75 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 10 |
| 472 | 706.43 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 482 | 706.45 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 14 |
| 504 | 707.33 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 14 | 18 |
| 506 | 707.40 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 16 | 16 |
| 525 | 707.94 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 540 | 708.37 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 555 | 708.94 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 559 | 709.04 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 560 | 709.04 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 570 | 709.33 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 602 | 710.07 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 616 | 710.32 | radiation | 30.0 | 43200 | > th | dose dependent | rect. | 16 | 16 |
| 636 | 710.64 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 641 | 710.76 | radiation | 30.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 656 | 710.83 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 658 | 710.89 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 22 | 8 |
| 669 | 711.21 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 5 |
| 672 | 711.33 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 18 |
| 673 | 711.35 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 22 | 5 |
| 686 | 711.88 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 690 | 711.97 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 691 | 711.99 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 754 | 713.04 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 22 |
| 788 | 713.80 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 805 | 714.21 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 816 | 714.48 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 15 | 8 |
| 821 | 714.56 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 824 | 714.64 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 830 | 714.69 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 15 | 11 |
| 853 | 715.02 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 18 | 21 |
| 918 | 715.62 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 921 | 715.71 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 932 | 715.96 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 941 | 716.11 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 12 | 1 |