Os02g0700300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphate starvation response regulator-like protein.
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Os02g0700300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphate starvation response regulator-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.38 | 0.391 | 10.7 | -0.596 | 1.05 | 0.848 | -0.417 | 2.25 | -0.0372 | 9.61 | 30.79 | 248 | -- | -- |
| 74.28 | 0.401 | 10.7 | -0.217 | 1.05 | 0.968 | -0.486 | -- | 0.0411 | 9.66 | 46.91 | 237 | -- | -- |
| 69.89 | 0.389 | 10.7 | -0.614 | 1.07 | 0.861 | -- | 2.29 | -0.0339 | 9.63 | 30.96 | 215 | -- | -- |
| 75.18 | 0.404 | 10.7 | -0.234 | 1.06 | 0.938 | -- | -- | 0.04 | 9.58 | 59.68 | 228 | -- | -- |
| 118.98 | 0.508 | 10.7 | -0.411 | -- | 1.46 | -- | 1.71 | 0.073 | -- | 31.97 | 586 | -- | -- |
| 83.97 | 0.43 | 10.7 | -0.424 | 1.14 | -- | -0.315 | -- | -0.0919 | 8.73 | -- | -- | -- | -- |
| 84.29 | 0.43 | 10.7 | -0.435 | 1.14 | -- | -- | -- | -0.0923 | 8.69 | -- | -- | -- | -- |
| 121.41 | 0.513 | 10.7 | -0.066 | -- | 1.55 | -- | -- | 0.146 | -- | 38.97 | 614 | -- | -- |
| 76.47 | 0.407 | 10.7 | -- | 1.05 | 1.05 | -- | -- | 0.0794 | 9.71 | 74.99 | 228 | -- | -- |
| 158.36 | 0.588 | 10.7 | -0.432 | -- | -- | -- | -- | -0.0827 | -- | -- | -- | -- | -- |
| 89.27 | 0.442 | 10.7 | -- | 1.14 | -- | -- | -- | -0.0439 | 8.72 | -- | -- | -- | -- |
| 121.51 | 0.513 | 10.7 | -- | -- | 1.57 | -- | -- | 0.156 | -- | 48.73 | 619 | -- | -- |
| 163.28 | 0.596 | 10.7 | -- | -- | -- | -- | -- | -0.0348 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.01 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 2 | 66.17 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 17 |
| 3 | 66.18 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 6 |
| 12 | 66.80 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 19 |
| 16 | 66.99 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 21 |
| 28 | 67.28 | radiation | 40 | 270 | < th | dose dependent | rect. | 18 | 16 |
| 39 | 67.58 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 22 |
| 43 | 67.66 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 6 |
| 50 | 67.78 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 18 |
| 55 | 67.86 | radiation | 20 | 270 | < th | dose independent | rect. | 18 | 15 |
| 59 | 67.92 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 20 |
| 77 | 68.15 | humidity | 70 | 270 | > th | dose dependent | rect. | 22 | 6 |
| 102 | 68.44 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 22 |
| 113 | 68.52 | humidity | 70 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 129 | 68.60 | temperature | 20 | 10 | > th | dose independent | rect. | 24 | 6 |
| 135 | 68.69 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 164 | 68.90 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 174 | 68.94 | humidity | 90 | 30 | > th | dose independent | rect. | 24 | 6 |
| 192 | 69.08 | humidity | 80 | 10 | > th | dose dependent | rect. | 24 | 6 |
| 206 | 69.18 | radiation | 40 | 270 | < th | dose independent | rect. | 3 | 10 |
| 207 | 69.18 | wind | 1 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 235 | 69.33 | temperature | 30 | 90 | < th | dose independent | rect. | 5 | 19 |
| 263 | 69.49 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 304 | 69.74 | temperature | 30 | 90 | < th | dose independent | rect. | 5 | 10 |
| 309 | 69.79 | wind | 1 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 312 | 69.81 | humidity | 80 | 270 | > th | dose independent | rect. | 23 | 5 |
| 336 | 69.87 | radiation | 40 | 270 | < th | dose dependent | rect. | 3 | 21 |
| 353 | 69.92 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 379 | 70.00 | humidity | 60 | 270 | > th | dose independent | rect. | 4 | 18 |
| 382 | 70.01 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 452 | 70.22 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 20 |
| 477 | 70.31 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 523 | 70.45 | temperature | 30 | 270 | < th | dose independent | rect. | 3 | 10 |
| 527 | 70.46 | humidity | 60 | 270 | > th | dose independent | rect. | 3 | 10 |
| 552 | 70.52 | humidity | 90 | 10 | > th | dose independent | sin | 7 | NA |
| 572 | 70.57 | humidity | 80 | 10 | > th | dose dependent | sin | 8 | NA |
| 583 | 70.61 | humidity | 70 | 270 | > th | dose independent | rect. | 18 | 17 |
| 627 | 70.71 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 629 | 70.72 | temperature | 30 | 270 | < th | dose independent | rect. | 3 | 20 |
| 709 | 70.89 | atmosphere | 1000 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 712 | 70.89 | humidity | 90 | 10 | > th | dose dependent | rect. | 24 | 19 |
| 723 | 70.92 | radiation | 20 | 270 | < th | dose independent | rect. | 3 | 21 |
| 735 | 70.95 | humidity | 90 | 10 | > th | dose dependent | rect. | 24 | 14 |
| 745 | 70.97 | atmosphere | 1000 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 746 | 70.97 | atmosphere | 1000 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 756 | 70.98 | atmosphere | 1000 | 43200 | < th | dose independent | rect. | 4 | 15 |
| 776 | 71.02 | atmosphere | 1000 | 43200 | > th | dose independent | rect. | 4 | 15 |
| 877 | 71.13 | atmosphere | 1000 | 43200 | < th | dose independent | sin | 0 | NA |
| 887 | 71.14 | atmosphere | 1000 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 897 | 71.15 | atmosphere | 1000 | 43200 | > th | dose independent | sin | 1 | NA |
| 898 | 71.15 | atmosphere | 1000 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 924 | 71.17 | atmosphere | 1000 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 931 | 71.17 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 16 | 1 |