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Os03g0325500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.0205) R2 : 0.545
β1 : 0.895 (0.0751) R2dD : 0.146 R2D : 0.075
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.1 (0.0604) R2dE : 0.328 R2E : 0.315
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.455 (0.0438) R2dN8 : 0.133 R2N8 : 0.0591
σ : 0.383
deviance : 67.7
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_____
C
peak time of C : --
E
wheather : radiation
threshold : 1.128
memory length : 995
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 3.18
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
57.87 0.357 12 0.955 1.09 1.42 0.543 0.0797 0.466 20 1.127 257 2.23 --
57.69 0.354 12 0.956 1.11 1.41 0.452 -- 0.464 19.9 1.122 250 2.31 --
58.2 0.355 12 0.925 1.08 1.41 -- -0.227 0.445 19.9 1.13 250 2.41 --
58.27 0.356 12 0.94 1.12 1.42 -- -- 0.453 20 1.126 245 2.15 --
68.16 0.385 12 0.919 -- 1.09 -- -0.0363 0.457 -- 1.12 986 2.78 --
82.17 0.425 12 0.955 0.779 -- 0.196 -- 0.47 15.4 -- -- -- --
82.29 0.425 12 0.959 0.78 -- -- -- 0.471 15.4 -- -- -- --
67.7 0.383 12 0.895 -- 1.1 -- -- 0.455 -- 1.128 995 3.18 --
81.8 0.421 12 -- 1.14 1.45 -- -- 0.393 20.1 1.04 240 2.06 --
116.48 0.504 12 0.926 -- -- -- -- 0.45 -- -- -- -- --
106.52 0.483 12 -- 0.761 -- -- -- 0.364 15.4 -- -- -- --
89.03 0.439 12 -- -- 1.1 -- -- 0.432 -- 1.11 1003 3.14 --
139.09 0.55 12 -- -- -- -- -- 0.348 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 55.68 precipitation 0.1 270 < th dose independent rect. 23 6
2 55.68 precipitation 0.1 270 < th dose dependent rect. 23 6
3 56.09 wind 7.0 270 < th dose independent rect. 23 6
4 56.33 radiation 1.0 270 < th dose independent rect. 23 6
7 56.34 radiation 10.0 270 < th dose dependent rect. 23 6
11 56.36 temperature 10.0 270 > th dose independent rect. 23 6
12 56.36 temperature 30.0 270 < th dose independent rect. 23 6
13 56.36 humidity 50.0 270 > th dose independent rect. 23 6
16 56.36 atmosphere 995.0 270 > th dose independent rect. 23 6
20 56.36 temperature 10.0 270 > th dose independent rect. 5 18
21 56.39 wind 9.0 270 < th dose independent rect. 5 18
24 56.62 atmosphere 1015.0 270 < th dose independent rect. 23 6
26 56.89 radiation 1.0 270 < th dose independent rect. 23 9
31 57.07 wind 5.0 90 < th dose independent rect. 1 5
32 57.07 precipitation 0.1 270 < th dose independent rect. 5 18
33 57.07 precipitation 0.1 270 < th dose dependent rect. 5 18
36 57.29 precipitation 0.1 270 < th dose independent rect. 1 3
37 57.29 precipitation 0.1 270 < th dose dependent rect. 1 3
38 57.30 radiation 1.0 270 < th dose dependent rect. 23 9
42 57.50 precipitation 0.1 90 < th dose independent rect. 1 5
43 57.50 precipitation 0.1 90 < th dose dependent rect. 1 5
45 57.62 wind 7.0 270 < th dose independent rect. 1 2
62 57.98 radiation 10.0 90 < th dose dependent rect. 1 6
63 57.99 temperature 10.0 270 > th dose independent rect. 1 2
65 57.99 temperature 30.0 270 < th dose independent rect. 1 2
66 57.99 humidity 50.0 270 > th dose independent rect. 1 2
69 57.99 atmosphere 995.0 270 > th dose independent rect. 1 2
70 57.99 atmosphere 1010.0 270 < th dose independent rect. 1 2
72 57.99 radiation 1.0 270 < th dose independent rect. 1 2
77 57.99 temperature 10.0 270 > th dose independent rect. 3 22
78 57.99 radiation 1.0 270 < th dose dependent rect. 1 2
83 58.00 wind 9.0 270 < th dose independent rect. 4 21
111 58.15 radiation 10.0 90 < th dose independent rect. 1 5
112 58.19 wind 9.0 90 < th dose dependent rect. 1 5
115 58.23 wind 1.0 270 > th dose independent rect. 23 6
116 58.24 temperature 10.0 90 > th dose independent rect. 1 5
118 58.24 temperature 30.0 90 < th dose independent rect. 1 5
119 58.24 humidity 50.0 90 > th dose independent rect. 1 5
122 58.24 atmosphere 995.0 90 > th dose independent rect. 1 5
123 58.24 atmosphere 1010.0 90 < th dose independent rect. 1 5
128 58.24 atmosphere 995.0 270 > th dose independent rect. 5 18
130 58.25 wind 9.0 270 < th dose dependent rect. 23 6
132 58.30 radiation 40.0 90 < th dose dependent rect. 1 5
136 58.36 wind 9.0 270 < th dose dependent rect. 1 2
143 58.44 radiation 1.0 270 > th dose independent sin 8 NA
193 58.65 humidity 50.0 270 > th dose dependent rect. 23 6
220 58.83 atmosphere 995.0 270 > th dose independent rect. 18 15
224 58.84 atmosphere 1015.0 270 < th dose independent rect. 5 18
231 58.97 temperature 10.0 270 > th dose dependent rect. 23 6
239 59.10 humidity 50.0 270 > th dose dependent rect. 1 2
240 59.12 temperature 10.0 270 > th dose independent rect. 9 9
241 59.12 atmosphere 1015.0 270 < th dose independent rect. 9 9
242 59.12 temperature 10.0 270 > th dose independent rect. 18 15
243 59.12 humidity 50.0 270 > th dose independent rect. 18 15
245 59.15 radiation 1.0 270 < th dose independent sin 9 NA
251 59.29 humidity 50.0 90 > th dose dependent rect. 1 5
254 59.31 wind 9.0 270 < th dose independent rect. 18 15
255 59.33 precipitation 0.1 270 < th dose independent rect. 4 21
256 59.33 precipitation 0.1 270 < th dose dependent rect. 4 21
257 59.34 temperature 10.0 270 > th dose dependent rect. 1 3
265 59.42 wind 1.0 270 > th dose independent rect. 24 4
286 59.45 wind 7.0 10 < th dose dependent rect. 1 6
288 59.48 temperature 10.0 90 > th dose dependent rect. 1 5
303 59.54 precipitation 0.1 270 < th dose independent rect. 10 19
304 59.54 precipitation 0.1 270 < th dose dependent rect. 10 19
310 59.59 radiation 1.0 270 < th dose dependent sin 8 NA
313 59.62 radiation 40.0 270 < th dose independent rect. 18 15
335 59.80 wind 5.0 10 < th dose independent rect. 1 6
336 59.82 humidity 50.0 270 > th dose independent rect. 4 7
337 59.82 precipitation 0.1 270 < th dose independent rect. 11 17
340 59.82 precipitation 0.1 270 < th dose dependent rect. 11 17
353 59.87 humidity 50.0 270 > th dose independent rect. 5 5
362 59.92 wind 9.0 270 < th dose independent rect. 5 5
363 59.92 temperature 10.0 270 > th dose independent rect. 5 5
364 59.92 atmosphere 995.0 270 > th dose independent rect. 5 5
365 59.92 atmosphere 1015.0 270 < th dose independent rect. 5 5
368 59.92 temperature 10.0 270 > th dose independent rect. 10 19
370 59.93 precipitation 0.1 270 < th dose independent rect. 5 5
371 59.93 atmosphere 1015.0 270 < th dose dependent rect. 1 2
372 59.93 precipitation 0.1 270 < th dose dependent rect. 5 5
374 59.94 precipitation 0.1 10 < th dose independent rect. 2 4
376 59.94 precipitation 0.1 270 < th dose independent rect. 9 9
377 59.94 precipitation 0.1 10 < th dose dependent rect. 2 4
378 59.94 precipitation 0.1 270 < th dose dependent rect. 9 9
379 59.96 wind 1.0 270 > th dose independent rect. 1 2
402 60.07 temperature 10.0 270 > th dose independent rect. 4 7
403 60.07 atmosphere 995.0 270 > th dose independent rect. 4 7
404 60.07 atmosphere 1015.0 270 < th dose independent rect. 4 7
406 60.07 temperature 10.0 270 > th dose independent rect. 11 17
408 60.10 temperature 30.0 270 < th dose independent rect. 19 14
410 60.11 wind 9.0 270 < th dose independent rect. 4 7
415 60.12 radiation 20.0 10 < th dose dependent rect. 2 5
421 60.14 precipitation 0.1 270 < th dose independent rect. 4 7
422 60.14 wind 9.0 270 < th dose independent rect. 9 9
423 60.14 precipitation 0.1 270 < th dose dependent rect. 4 7
457 60.33 wind 1.0 270 > th dose independent rect. 5 18
459 60.37 precipitation 0.1 270 < th dose independent rect. 24 16
460 60.37 precipitation 0.1 270 < th dose dependent rect. 24 16
467 60.40 wind 9.0 270 < th dose independent rect. 10 19
514 60.59 radiation 1.0 270 > th dose independent rect. 4 6
550 60.62 wind 9.0 270 < th dose independent rect. 11 17
563 60.67 radiation 10.0 10 < th dose independent rect. 2 4
599 60.81 temperature 30.0 270 < th dose independent rect. 5 5
603 60.82 wind 9.0 10 < th dose independent rect. 6 20
650 60.99 wind 9.0 270 < th dose independent rect. 16 8
653 61.00 temperature 10.0 10 > th dose independent rect. 2 4
655 61.00 temperature 30.0 10 < th dose independent rect. 2 4
656 61.00 humidity 50.0 10 > th dose independent rect. 2 4
659 61.00 atmosphere 995.0 10 > th dose independent rect. 2 4
660 61.00 atmosphere 1010.0 10 < th dose independent rect. 2 4
665 61.00 radiation 40.0 270 < th dose independent rect. 5 5
666 61.00 temperature 10.0 10 > th dose independent rect. 6 20
672 61.02 atmosphere 1015.0 90 < th dose dependent rect. 1 5
673 61.02 atmosphere 1015.0 270 < th dose dependent rect. 23 6
680 61.06 precipitation 0.1 10 < th dose independent rect. 6 20
681 61.06 precipitation 0.1 10 < th dose dependent rect. 6 20
686 61.09 radiation 30.0 270 < th dose independent rect. 16 8
688 61.09 humidity 50.0 10 > th dose dependent rect. 2 5
699 61.14 temperature 10.0 270 > th dose independent rect. 16 8
701 61.14 temperature 10.0 270 > th dose independent rect. 24 16
702 61.14 atmosphere 1015.0 270 < th dose independent rect. 24 16
762 61.34 radiation 30.0 1440 < th dose independent rect. 2 5
765 61.34 wind 9.0 270 < th dose independent rect. 24 16
886 61.54 atmosphere 995.0 270 > th dose independent rect. 24 16
894 61.57 precipitation 0.1 270 < th dose independent rect. 9 21
897 61.57 precipitation 0.1 270 < th dose dependent rect. 9 21
898 61.58 precipitation 0.1 10 < th dose independent rect. 7 18
900 61.58 precipitation 0.1 10 < th dose dependent rect. 7 18
966 61.63 radiation 40.0 270 < th dose independent rect. 5 19
973 61.65 wind 9.0 1440 < th dose independent rect. 2 5
974 61.65 temperature 10.0 1440 > th dose independent rect. 2 5
977 61.65 temperature 30.0 1440 < th dose independent rect. 2 5
981 61.65 humidity 50.0 1440 > th dose independent rect. 2 5
986 61.65 atmosphere 995.0 1440 > th dose independent rect. 2 5
993 61.65 temperature 10.0 1440 > th dose independent rect. 7 19