Os05g0488600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1).
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Os05g0488600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.25 | 0.53 | 11 | -5.3 | 1.6 | 0.215 | 1.72 | 5.68 | -0.713 | 5.51 | 0.4843 | 4425 | -- | -- |
| 149.78 | 0.57 | 10.8 | -4.08 | 1.23 | 0.838 | 1.57 | -- | -0.329 | 5.8 | 25.79 | 291 | -- | -- |
| 129.47 | 0.53 | 11 | -5.05 | 1.56 | 0.058 | -- | 5.93 | -0.705 | 5.42 | 0.4898 | 4867 | -- | -- |
| 156.19 | 0.582 | 10.9 | -4.04 | 1.28 | 0.962 | -- | -- | -0.342 | 6.01 | 26.29 | 291 | -- | -- |
| 201.12 | 0.661 | 11 | -4.74 | -- | 1.73 | -- | 5.3 | -0.455 | -- | 0.56 | 4964 | -- | -- |
| 164.89 | 0.602 | 10.9 | -4.06 | 1.6 | -- | 1.96 | -- | -0.422 | 5.36 | -- | -- | -- | -- |
| 174.41 | 0.618 | 10.9 | -4.06 | 1.62 | -- | -- | -- | -0.43 | 5.44 | -- | -- | -- | -- |
| 177.45 | 0.62 | 10.9 | -4.04 | -- | 1.85 | -- | -- | -0.336 | -- | 8.005 | 663 | -- | -- |
| 556.96 | 1.1 | 10.8 | -- | 0.625 | 1.91 | -- | -- | 0.166 | 6.07 | 30.01 | 489 | -- | -- |
| 310.46 | 0.823 | 10.9 | -4 | -- | -- | -- | -- | -0.39 | -- | -- | -- | -- | -- |
| 608.38 | 1.15 | 10.8 | -- | 1.55 | -- | -- | -- | 0.0219 | 5.55 | -- | -- | -- | -- |
| 565.32 | 1.11 | 10.7 | -- | -- | 2.27 | -- | -- | 0.275 | -- | 20.17 | 494 | -- | -- |
| 733.3 | 1.26 | 10.8 | -- | -- | -- | -- | -- | 0.0538 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.50 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 20 |
| 9 | 128.63 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 13 |
| 12 | 129.21 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 12 | 20 |
| 13 | 129.25 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 10 | 22 |
| 38 | 129.58 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 23 |
| 42 | 129.59 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 20 | 23 |
| 43 | 129.60 | radiation | 1.0 | 4320 | < th | dose dependent | no | NA | NA |
| 45 | 129.60 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 22 | 23 |
| 48 | 129.61 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 22 | 21 |
| 89 | 129.71 | radiation | 1.0 | 4320 | < th | dose dependent | sin | 0 | NA |
| 91 | 129.78 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 16 | 23 |
| 155 | 130.76 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 17 |
| 161 | 130.78 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 13 |
| 166 | 130.81 | radiation | 1.0 | 4320 | < th | dose dependent | sin | 14 | NA |
| 171 | 130.88 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 10 | 16 |
| 179 | 130.98 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 10 | 12 |
| 182 | 131.00 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 10 | 9 |
| 186 | 131.07 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 14 | 12 |
| 190 | 131.13 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 13 |
| 206 | 131.17 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 14 | 7 |
| 209 | 131.18 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 14 | 5 |
| 272 | 131.54 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 314 | 132.06 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 16 | 23 |
| 315 | 132.11 | radiation | 1.0 | 4320 | < th | dose independent | sin | 1 | NA |
| 329 | 132.25 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 330 | 132.26 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 12 | 21 |
| 331 | 132.27 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 10 | 23 |
| 334 | 132.32 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 12 | 23 |
| 339 | 132.39 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 20 | 23 |
| 340 | 132.39 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 22 | 23 |
| 341 | 132.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 343 | 132.40 | radiation | 1.0 | 4320 | > th | dose independent | sin | 1 | NA |
| 344 | 132.40 | radiation | 1.0 | 4320 | < th | dose independent | no | NA | NA |
| 345 | 132.40 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 3 | 20 |
| 350 | 132.40 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 22 | 21 |
| 366 | 132.41 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 3 | 16 |
| 420 | 132.58 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 16 | 23 |
| 424 | 132.64 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 425 | 132.64 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 8 |
| 443 | 132.73 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 10 | 23 |
| 447 | 132.75 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 12 | 21 |
| 448 | 132.75 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 12 | 23 |
| 451 | 132.81 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 10 |
| 452 | 132.83 | radiation | 1.0 | 4320 | > th | dose independent | no | NA | NA |
| 506 | 132.86 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 10 |
| 509 | 132.88 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 525 | 132.98 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 539 | 133.06 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 563 | 133.23 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 565 | 133.23 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 582 | 133.38 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 632 | 133.53 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 678 | 133.77 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 689 | 133.87 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 707 | 133.99 | radiation | 1.0 | 4320 | < th | dose independent | sin | 14 | NA |
| 712 | 134.03 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 722 | 134.06 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 728 | 134.08 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 7 | 15 |
| 754 | 134.15 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 763 | 134.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 764 | 134.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 4 |
| 780 | 134.24 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 792 | 134.29 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 807 | 134.37 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 840 | 134.46 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 7 |
| 847 | 134.48 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 848 | 134.48 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 10 | 17 |
| 855 | 134.49 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 10 | 15 |
| 861 | 134.50 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 862 | 134.50 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 863 | 134.50 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 864 | 134.50 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 10 | 9 |
| 867 | 134.50 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 23 | NA |
| 869 | 134.50 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 4 |
| 878 | 134.52 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 890 | 134.54 | radiation | 1.0 | 4320 | > th | dose independent | sin | 14 | NA |
| 892 | 134.54 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 893 | 134.54 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 2 |
| 899 | 134.55 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 903 | 134.56 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 906 | 134.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 926 | 134.58 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 7 | 14 |
| 956 | 134.61 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 3 | 4 |