Os07g0685300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1).
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Os07g0685300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 128.52 | 0.533 | 9.38 | -2.75 | 1.15 | 2 | -1.03 | -5.97 | -0.65 | 9.22 | 25.07 | 4375 | -- | -- |
| 143.52 | 0.558 | 9.25 | -1.83 | 1.13 | 1.85 | -0.949 | -- | -0.581 | 9 | 21.5 | 7163 | -- | -- |
| 132.11 | 0.535 | 9.38 | -2.78 | 1.14 | 1.98 | -- | -5.98 | -0.636 | 9.07 | 25.1 | 4488 | -- | -- |
| 146.69 | 0.564 | 9.25 | -1.86 | 1.13 | 1.86 | -- | -- | -0.586 | 8.98 | 21.47 | 7159 | -- | -- |
| 207.15 | 0.67 | 9.41 | -2.72 | -- | 1.92 | -- | -5.57 | -0.656 | -- | 24.82 | 4509 | -- | -- |
| 222.4 | 0.699 | 9.1 | -0.513 | 1.11 | -- | -1.05 | -- | 0.0982 | 8.81 | -- | -- | -- | -- |
| 226.13 | 0.704 | 9.1 | -0.549 | 1.11 | -- | -- | -- | 0.0977 | 8.79 | -- | -- | -- | -- |
| 219.56 | 0.69 | 9.27 | -1.91 | -- | 1.91 | -- | -- | -0.6 | -- | 21.31 | 5845 | -- | -- |
| 184.07 | 0.632 | 9.18 | -- | 1.2 | 1.12 | -- | -- | -0.275 | 9.12 | 23 | 3761 | -- | -- |
| 296.53 | 0.805 | 9.13 | -0.547 | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
| 234.06 | 0.716 | 9.08 | -- | 1.11 | -- | -- | -- | 0.159 | 8.83 | -- | -- | -- | -- |
| 250.94 | 0.74 | 9.16 | -- | -- | 0.975 | -- | -- | -0.0283 | -- | 21.31 | 5845 | -- | -- |
| 304.43 | 0.814 | 9.11 | -- | -- | -- | -- | -- | 0.167 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.62 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 13 | 125.30 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 48 | 126.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 74 | 127.39 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 80 | 127.54 | temperature | 25 | 4320 | < th | dose independent | rect. | 15 | 6 |
| 94 | 127.91 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 95 | 127.94 | temperature | 25 | 4320 | > th | dose independent | rect. | 24 | 22 |
| 101 | 128.07 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 22 |
| 109 | 128.10 | temperature | 25 | 4320 | < th | dose independent | rect. | 24 | 22 |
| 110 | 128.12 | temperature | 25 | 4320 | > th | dose independent | rect. | 15 | 5 |
| 119 | 128.23 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 121 | 128.23 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 22 |
| 122 | 128.27 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 22 |
| 144 | 128.46 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 22 |
| 145 | 128.47 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 18 |
| 163 | 128.59 | temperature | 25 | 4320 | > th | dose independent | no | NA | NA |
| 170 | 128.61 | temperature | 25 | 4320 | < th | dose independent | sin | 17 | NA |
| 171 | 128.61 | temperature | 25 | 4320 | > th | dose independent | rect. | 13 | 23 |
| 174 | 128.63 | temperature | 25 | 4320 | > th | dose independent | rect. | 15 | 23 |
| 178 | 128.64 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 18 |
| 189 | 128.68 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 23 |
| 195 | 128.71 | temperature | 25 | 4320 | > th | dose independent | sin | 18 | NA |
| 200 | 128.72 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 211 | 128.75 | temperature | 25 | 4320 | < th | dose independent | no | NA | NA |
| 218 | 128.76 | temperature | 25 | 4320 | < th | dose independent | rect. | 14 | 23 |
| 232 | 128.80 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 258 | 128.90 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 23 |
| 275 | 128.96 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 23 |
| 330 | 129.17 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 23 |
| 360 | 129.29 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 490 | 129.76 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 545 | 129.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 4 |
| 714 | 130.64 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 743 | 130.79 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 6 |
| 767 | 130.88 | temperature | 25 | 4320 | > th | dose dependent | rect. | 14 | 4 |
| 784 | 131.01 | temperature | 25 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 799 | 131.05 | temperature | 25 | 4320 | > th | dose dependent | rect. | 11 | 8 |
| 832 | 131.18 | temperature | 25 | 4320 | > th | dose independent | sin | 4 | NA |
| 889 | 131.36 | temperature | 25 | 4320 | > th | dose independent | rect. | 24 | 14 |
| 911 | 131.44 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 915 | 131.46 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 938 | 131.53 | temperature | 25 | 4320 | < th | dose independent | sin | 4 | NA |