BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0633800 Os03g0633800|AK073044
(226 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0633800 Similar to IAA6 (Fragment) 343 7e-95
Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) ... 195 2e-50
Os07g0182400 AUX/IAA protein family protein 149 1e-36
Os03g0797800 AUX/IAA protein family protein 140 1e-33
Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) ... 138 3e-33
Os03g0742900 Aux /IAA protein 134 5e-32
Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) ... 129 1e-30
Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) ... 127 4e-30
Os06g0335500 AUX/IAA protein family protein 125 4e-29
Os05g0559400 Similar to IAA11 (Fragment) 124 7e-29
Os01g0675700 Similar to Auxin-responsive protein IAA14 (Ind... 122 2e-28
Os06g0597000 Similar to Auxin responsive protein IAA-Re 111 5e-25
Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) ... 108 3e-24
Os09g0527700 Similar to Auxin-induced protein IAA4 108 3e-24
Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) ... 107 8e-24
Os02g0817600 AUX/IAA protein family protein 106 2e-23
Os05g0523300 Similar to IAA8 (Fragment) 93 1e-19
Os01g0741900 Similar to Auxin-responsive protein IAA26 (Ind... 85 4e-17
Os01g0190300 Similar to Auxin-responsive protein IAA26 (Ind... 80 2e-15
Os02g0228900 Similar to Auxin-responsive protein IAA18 (Ind... 79 2e-15
Os08g0109400 AUX/IAA protein family protein 77 9e-15
Os06g0355300 69 3e-12
>Os03g0633800 Similar to IAA6 (Fragment)
Length = 226
Score = 343 bits (879), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 175/226 (77%), Positives = 175/226 (77%)
Query: 1 MEAAVGYAADSLIKATELRLGLPGTADDLPSTPRGKKRXXXXXXXXXXXXXXXXXXXXXX 60
MEAAVGYAADSLIKATELRLGLPGTADDLPSTPRGKKR
Sbjct: 1 MEAAVGYAADSLIKATELRLGLPGTADDLPSTPRGKKRAAAAEDNNANAAAADDDEHDAV 60
Query: 61 XXXPPVAKAQVVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXX 120
PPVAKAQVVGWPPVRSYRKSCFQQQ CNNKDEPITKN
Sbjct: 61 EAAPPVAKAQVVGWPPVRSYRKSCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPAPAAS 120
Query: 121 XXXXXNGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSGAADGANPSEFAI 180
NGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSGAADGANPSEFAI
Sbjct: 121 SAAAANGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSGAADGANPSEFAI 180
Query: 181 TYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQMKI 226
TYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQMKI
Sbjct: 181 TYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQMKI 226
>Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 197
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 132/217 (60%), Gaps = 31/217 (14%)
Query: 13 IKATELRLGLPGTADDL---PSTPR-GKKRXXXXXXXXXXXXXXXXXXXXXXXXXPPVAK 68
+KATELRLGLPGT ++ PSTPR G KR AK
Sbjct: 4 LKATELRLGLPGTEEEAAPPPSTPRAGSKRALAGEPDQAKIKPAA------------AAK 51
Query: 69 AQVVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXXXXNGG 128
AQVVGWPPVRSYRKSC Q + GG
Sbjct: 52 AQVVGWPPVRSYRKSCLQPTTTTTKSKPPPAAAAAETQQ------------KEDVAGAGG 99
Query: 129 SLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSG--AADGA-NPSEFAITYQDK 185
VKVSMDGAPYLRKIDL++YKGYRELREALEAMF+CFSG AAD A NPS+FA+TY+DK
Sbjct: 100 LFVKVSMDGAPYLRKIDLKVYKGYRELREALEAMFLCFSGGAAADAAVNPSDFAVTYEDK 159
Query: 186 DGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPR 222
DGDLMLVGDVPF+MF STCK+LRIMK SEA GLG+ R
Sbjct: 160 DGDLMLVGDVPFEMFISTCKRLRIMKGSEARGLGATR 196
>Os07g0182400 AUX/IAA protein family protein
Length = 219
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 97/151 (64%), Gaps = 19/151 (12%)
Query: 67 AKAQVVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXXXXN 126
AKAQVVGWPPVR+YR++ F Q DE +
Sbjct: 85 AKAQVVGWPPVRAYRRNTFHQAAAAAAATK------KGGDEKQKQQQQGGGL-------- 130
Query: 127 GGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFV-CFSG-AADGANPSEFAITYQD 184
VKVSMDGAPYLRK+DL+M KGYRELREAL+ +F CFS A+DG + +FAI Y+D
Sbjct: 131 ---YVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFTKCFSATASDGCSDGQFAIAYED 187
Query: 185 KDGDLMLVGDVPFDMFTSTCKKLRIMKRSEA 215
KDGDLMLVGDVP++MF S+CKKLRIMK SEA
Sbjct: 188 KDGDLMLVGDVPWEMFISSCKKLRIMKGSEA 218
>Os03g0797800 AUX/IAA protein family protein
Length = 197
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 94/151 (62%), Gaps = 15/151 (9%)
Query: 65 PVAKAQVVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXXX 124
P +K QVVGWPPV SYR+S FQ K
Sbjct: 61 PASKVQVVGWPPVGSYRRSTFQSSSSSTAAAAKGKGGGETDQGRKNKG------------ 108
Query: 125 XNGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSGAADGANPSEFAITYQD 184
GG VKVSMDGAPYLRK+DLRMY GYRELR+AL+A+F CFS A A+ + FA+ Y+D
Sbjct: 109 --GGLYVKVSMDGAPYLRKVDLRMYGGYRELRDALDALFGCFS-ADASASAAHFAVAYED 165
Query: 185 KDGDLMLVGDVPFDMFTSTCKKLRIMKRSEA 215
KDGDLML GDVP+DMF S+CKKLRIM+ SEA
Sbjct: 166 KDGDLMLAGDVPWDMFISSCKKLRIMRGSEA 196
>Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 277
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 96/177 (54%), Gaps = 34/177 (19%)
Query: 64 PPVAKAQVVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXX 123
P KAQVVGWPPVRSYRK+ Q K+
Sbjct: 114 PRAPKAQVVGWPPVRSYRKNILAVQADKG------------------KDAADGGGDKSGA 155
Query: 124 XXNGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCF---------------SG 168
+ VKVSMDGAPYLRK+DL+MYK Y EL +ALE MF F S
Sbjct: 156 GAAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESK 215
Query: 169 AADGANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQMK 225
AD N SE+ TY+DKDGD MLVGDVP++MF +CK+LRIMK SEA GL +PR M+
Sbjct: 216 IADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGL-APRAME 271
>Os03g0742900 Aux /IAA protein
Length = 236
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 92/158 (58%), Gaps = 17/158 (10%)
Query: 68 KAQVVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXXXXNG 127
KAQ VGWPPVRS+R++ Q + K+E K N
Sbjct: 84 KAQAVGWPPVRSFRRNIMTVQSVK-----------SKKEEEADKQQQQPAANASGS--NS 130
Query: 128 GSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSGAADGANP---SEFAITYQD 184
+ VKVSMDGAPYLRK+DL+MY Y++L AL+ MF F+ + N S+ TY+D
Sbjct: 131 SAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATGNNMNEVNGSDAVTTYED 190
Query: 185 KDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPR 222
KDGD MLVGDVP+ MF +CK+LRIMK SEA GL +PR
Sbjct: 191 KDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGL-APR 227
>Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 263
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 93/155 (60%), Gaps = 27/155 (17%)
Query: 71 VVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXXXXNGGSL 130
VVGWPP+RSYRK+ +NK++ K G
Sbjct: 124 VVGWPPIRSYRKNTMATNQIK-----------SNKEDVDAKQG------------QGFLY 160
Query: 131 VKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSGAADGAN---PSEFAITYQDKDG 187
VKVSMDGAPYLRK+DL+ YK Y+++ LE MF+ FS +GA E+ +TY+DKDG
Sbjct: 161 VKVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAENQKDGEYVLTYEDKDG 220
Query: 188 DLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPR 222
D MLVGDVP++MFT +C++LRIMK S+A GL +PR
Sbjct: 221 DWMLVGDVPWEMFTDSCRRLRIMKGSDAIGL-APR 254
>Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 241
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 90/170 (52%), Gaps = 47/170 (27%)
Query: 64 PPVAKAQVVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXX 123
P KAQVVGWPPVRS+RK+ ++ C
Sbjct: 94 PRAPKAQVVGWPPVRSFRKNVLAEK-------------CK-------------------- 120
Query: 124 XXNGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSGAADGANPS------- 176
+LVKVSMDGAPYLRKID+ MYK Y EL A + MF F+ G++
Sbjct: 121 ---AAALVKVSMDGAPYLRKIDVAMYKSYPELSMAFQNMFTSFTIGKCGSHQQLKESNKL 177
Query: 177 ----EFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPR 222
E+ TY+DKDGD MLVGDVP++MF +CK+LRIMK SEA GLG +
Sbjct: 178 RDDLEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLGHTK 227
>Os06g0335500 AUX/IAA protein family protein
Length = 266
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 94/170 (55%), Gaps = 39/170 (22%)
Query: 71 VVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXXXXNGGSL 130
VVGWPP+RSYRK+ KD+ K +G
Sbjct: 109 VVGWPPIRSYRKNTMAMSQPA----------LKGKDDGEAKQAPA----------SGCLY 148
Query: 131 VKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFS---GAADGA-------------- 173
VKVSMDGAPYLRK+DL+MYK Y+EL ALE MF CF+ G ++G
Sbjct: 149 VKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDL 208
Query: 174 -NPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPR 222
N +E +TY+DKD D MLVGDVP+ MFT +C++LRIMK S+A GL +PR
Sbjct: 209 KNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGL-APR 257
>Os05g0559400 Similar to IAA11 (Fragment)
Length = 281
Score = 124 bits (310), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 91/174 (52%), Gaps = 43/174 (24%)
Query: 70 QVVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXXXXNGGS 129
QVVGWPPVRSYRK+ K E K+ G
Sbjct: 127 QVVGWPPVRSYRKNTL------------AASATKTKGEDQGKSEV------------GCC 162
Query: 130 LVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCF------------------SGAAD 171
VKVSMDGAPYLRK+DL+ Y Y +L ALE MF CF AD
Sbjct: 163 YVKVSMDGAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRAD 222
Query: 172 GANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQMK 225
E+ +TY+DKD D MLVGD+P+D+FT++C+KLRIM+ S+A G+ +PR ++
Sbjct: 223 ALKDQEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGM-APRSLE 275
>Os01g0675700 Similar to Auxin-responsive protein IAA14 (Indoleacetic
acid-induced protein 14) (SOLITARY-ROOT protein)
Length = 271
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 91/175 (52%), Gaps = 45/175 (25%)
Query: 70 QVVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXXXXNGGS 129
QVVGWPPVR+YRK+ K E GG
Sbjct: 117 QVVGWPPVRNYRKNTL------------AASASKGKGE-------------DKGTAEGGP 151
Query: 130 L-VKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCF------------------SGAA 170
L VKVSMDGAPYLRK+DL+MY Y +L ALE MF CF A
Sbjct: 152 LYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKA 211
Query: 171 DGANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQMK 225
D E+ +TY+DKD D MLVGD+P+D+FT+ C+KL+IM+ S+A G+ +PR ++
Sbjct: 212 DALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGI-APRSIE 265
>Os06g0597000 Similar to Auxin responsive protein IAA-Re
Length = 193
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 85/173 (49%), Gaps = 50/173 (28%)
Query: 64 PPVAKAQVVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXX 123
PP KA+ VGWPPVR+YR++ ++
Sbjct: 55 PPSPKARAVGWPPVRAYRRNALREDSAR-------------------------------- 82
Query: 124 XXNGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFV-CF------------SGAA 170
LVKV++DGAPYLRK+DL + GY L AL MF C +
Sbjct: 83 ----AKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAVRGGGGGDGEGTKLV 138
Query: 171 DGANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQ 223
D +E+ TY+DKDGD MLVGDVP+ MF +CK++R+MK SEA L SPR+
Sbjct: 139 DLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNL-SPRR 190
>Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 212
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 84/169 (49%), Gaps = 43/169 (25%)
Query: 64 PPVAKAQVVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXX 123
PP KA+VVGWPPVR++RK+
Sbjct: 75 PPSPKARVVGWPPVRAFRKNALAALAAASS------------------------------ 104
Query: 124 XXNGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSGA----------ADGA 173
+ VKV++DGAPYLRK+DL Y+GY +L AL+ F D
Sbjct: 105 --SKAKFVKVAVDGAPYLRKVDLEAYRGYDQLLAALQDKFFSHFTIRKLGNEEMKLVDAV 162
Query: 174 NPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPR 222
+ +E+ TY+DKDGD MLVGDVP+ MF TC++LR+MK SEA L +PR
Sbjct: 163 SGNEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNL-APR 210
>Os09g0527700 Similar to Auxin-induced protein IAA4
Length = 140
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Query: 130 LVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFS-GAADGANPSEFAITYQDKDGD 188
VKVSMDG PYLRK+D+ Y Y EL EAL MF C + G DG E A+ Y+D DGD
Sbjct: 47 FVKVSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIGLMDGYGEWEHAVVYEDGDGD 106
Query: 189 LMLVGDVPFDMFTSTCKKLRIMKRSEATGLGS 220
MLVGDVP++MF S+CK++R+M+ EA GL S
Sbjct: 107 WMLVGDVPWEMFVSSCKRMRVMRACEARGLSS 138
>Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 199
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 78/163 (47%), Gaps = 52/163 (31%)
Query: 70 QVVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXXXXNGGS 129
+VVGWPPVRS+RK+
Sbjct: 76 RVVGWPPVRSFRKNAL-----------------------------------------AAK 94
Query: 130 LVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCF----------SGAADGANPSEFA 179
VKV++DGAPYLRK+DL Y GY +L AL+ F D N +E+
Sbjct: 95 FVKVAVDGAPYLRKVDLEAYSGYDQLLRALQDKFFSHFTIRKFADDERKLVDAVNGTEYV 154
Query: 180 ITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPR 222
TY+DKDGD MLVGDVP+ MF TC++LR+MK SEA L +PR
Sbjct: 155 PTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNL-APR 196
>Os02g0817600 AUX/IAA protein family protein
Length = 280
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 82/164 (50%), Gaps = 18/164 (10%)
Query: 71 VVGWPPVRSYR-KSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXXXXNGGS 129
VVGWPP+R +R S F Q N D K
Sbjct: 111 VVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVA-------G 163
Query: 130 LVKVSMDGAPYLRKIDLRMYKGYRELREALEAMF------VCFSGAADGA----NPSEFA 179
VKV+MDG RK+DL ++ Y+ L ALE MF +C S + N +E+
Sbjct: 164 WVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNSAEYQ 223
Query: 180 ITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQ 223
+TY+D+DGD MLVGDVP++MF S+ K+LRIM+ S+A GLG Q
Sbjct: 224 LTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQRYQ 267
>Os05g0523300 Similar to IAA8 (Fragment)
Length = 327
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 83/171 (48%), Gaps = 50/171 (29%)
Query: 71 VVGWPPVRSYRK-----SCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXXXX 125
VVGWPP+RS+R+ S F+Q ++K +PI K
Sbjct: 168 VVGWPPIRSFRRNLTNGSSFKQ------SPERQNDEADDKAKPICKKR------------ 209
Query: 126 NGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMF---------------------- 163
LVK++MDG P RK+DL++Y Y++L A+E +F
Sbjct: 210 ---PLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAED 266
Query: 164 VCFSGAADGANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSE 214
FSG DG + + Y+D DGD ML GD+P+ +F ST K+LR+M+RSE
Sbjct: 267 KIFSGLLDGTGV--YTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
>Os01g0741900 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 335
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 36/170 (21%)
Query: 67 AKAQVVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXXXXN 126
A A VVGWPP+RS+R++ ++K P +N N
Sbjct: 172 AAAPVVGWPPIRSFRRNL--------------ASSSSSKHSPEPQNDNANAKVTLTCKKN 217
Query: 127 GGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCF--------------SGAADG 172
LVK++MDG P RKIDL Y Y L A++ +F F GA D
Sbjct: 218 --PLVKINMDGIPIGRKIDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDK 275
Query: 173 A------NPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEAT 216
E+ + Y+D +GD MLVGDVP+ +F ST K+LR+++ SE +
Sbjct: 276 IFYQLLDGSGEYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSELS 325
>Os01g0190300 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 238
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 24/155 (15%)
Query: 74 WPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXXXXNGGSLVKV 133
WPPVRS+R++ + +K+ G VK+
Sbjct: 74 WPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEK----------GMFVKI 123
Query: 134 SMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSGAADG--------------ANPSEFA 179
+MDG P RK+DL Y GY +L A++ +F A E+
Sbjct: 124 NMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEADAAAAGEMVGGGEYT 183
Query: 180 ITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSE 214
+ Y+D +GD MLVGDVP+ MF +T K+LR++K S+
Sbjct: 184 LVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSD 218
>Os02g0228900 Similar to Auxin-responsive protein IAA18 (Indoleacetic
acid-induced protein 18)
Length = 300
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 43/166 (25%)
Query: 71 VVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXXXXNGGSL 130
VVGWPPVR++R++ K E I +
Sbjct: 139 VVGWPPVRTFRRNLATSSKASLELQNGKKAA---KAEEIKR----------------APF 179
Query: 131 VKVSMDGAPYLRKIDLRMYKGYRELREALEAMF----------------------VCFSG 168
+K++MDG P RKIDL + Y +L A++ +F V SG
Sbjct: 180 IKINMDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISG 239
Query: 169 AADGANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSE 214
DG E+ + Y+D +GD +LVGDVP+ MF S+ K+LR++K S+
Sbjct: 240 LLDGTG--EYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSD 283
>Os08g0109400 AUX/IAA protein family protein
Length = 246
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 18/156 (11%)
Query: 67 AKAQVVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXXXXN 126
+ AQ+VGWPPVR++RK+ + C+++ +
Sbjct: 89 SSAQLVGWPPVRAFRKNLSTPKPADADDLMNKVKLCSDEGH-------GSRCAAQERRSS 141
Query: 127 GGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCF--SGAADGANPSE------- 177
VKV+++G RKIDL+ ++ Y L +AL++MF F G A N +
Sbjct: 142 STMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSK 201
Query: 178 --FAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMK 211
+ + Y+D +GD MLVGDVP+++F ++ K+L I +
Sbjct: 202 KRYVLVYEDNEGDRMLVGDVPWELFIASVKRLYIAQ 237
>Os06g0355300
Length = 149
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 67 AKAQVVGWPPVRSYRKSCFQQQXXXXXXXXXXXXXCNNKDEPITKNXXXXXXXXXXXXXN 126
+ AQ+VGWPPVR++RK+ + NK +P + +
Sbjct: 9 SSAQLVGWPPVRTFRKNLSTPKPADADDLM-------NKMKPCSDEGHGSRDAAQERRPS 61
Query: 127 GGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCF--SGAADGANPSE------- 177
VKV+++G RKIDL+ ++ Y L +AL++MF F G A N +
Sbjct: 62 STMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGSK 121
Query: 178 --FAITYQDKDGDLMLVGDVPFD 198
+ + Y+D +GD MLVGDVP++
Sbjct: 122 KRYVLVYEDNEGDRMLVGDVPWE 144
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,136,992
Number of extensions: 193801
Number of successful extensions: 437
Number of sequences better than 1.0e-10: 23
Number of HSP's gapped: 415
Number of HSP's successfully gapped: 23
Length of query: 226
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 129
Effective length of database: 11,971,043
Effective search space: 1544264547
Effective search space used: 1544264547
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 154 (63.9 bits)