BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0140000 Os12g0140000|Os12g0140000
(98 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0140000 171 1e-43
Os11g0143800 152 6e-38
Os12g0140200 Zinc finger, RING-type domain containing protein 146 4e-36
Os03g0812800 81 2e-16
Os03g0812400 EF-Hand type domain containing protein 77 4e-15
Os12g0228800 Similar to Calmodulin-like protein 73 5e-14
Os03g0813500 71 2e-13
Os05g0380900 Similar to Polcalcin Jun o 2 (Calcium-binding ... 71 2e-13
Os07g0223900 70 3e-13
Os03g0743500 Similar to Calmodulin 1 (Fragment) 70 4e-13
Os03g0331700 Similar to Avr9/Cf-9 rapidly elicited protein 31 69 7e-13
Os04g0492800 Similar to Calmodulin (CaM) 69 9e-13
Os09g0412300 Calcium-binding EF-hand domain containing protein 67 2e-12
Os07g0681400 Similar to Calcium-binding protein CAST 67 2e-12
Os08g0144100 Similar to Avr9/Cf-9 rapidly elicited protein 31 67 3e-12
Os06g0172200 Parvalbumin family protein 67 3e-12
Os01g0949500 Similar to Calmodulin (CaM) 67 3e-12
Os05g0312600 EF-Hand type domain containing protein 66 6e-12
Os01g0279300 Similar to Calmodulin 1 (Fragment) 65 8e-12
Os05g0491100 Similar to Calmodulin 62 7e-11
Os07g0687200 Calmodulin (CaM) 62 8e-11
Os03g0319300 Calmodulin (CaM) 62 8e-11
Os01g0267900 Similar to Calmodulin NtCaM3 (Calmodulin NtCaM... 62 8e-11
Os12g0603800 Similar to Calmodulin NtCaM13 62 8e-11
Os01g0135700 Flagellar calcium-binding protein (calflagin) ... 62 1e-10
>Os12g0140000
Length = 98
Score = 171 bits (433), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 86/98 (87%)
Query: 1 MAMSMWEGDECSXXXXXXXXXXXXKQASWEELEEAFSVFDGDGDGFISPLELQSVMRRLG 60
MAMSMWEGDECS KQASWEELEEAFSVFDGDGDGFISPLELQSVMRRLG
Sbjct: 1 MAMSMWEGDECSLVEDEALVLLEEKQASWEELEEAFSVFDGDGDGFISPLELQSVMRRLG 60
Query: 61 LQHDAGHEECERMLKVFDRDGDGMINFDEFKVMMQGVI 98
LQHDAGHEECERMLKVFDRDGDGMINFDEFKVMMQGVI
Sbjct: 61 LQHDAGHEECERMLKVFDRDGDGMINFDEFKVMMQGVI 98
>Os11g0143800
Length = 146
Score = 152 bits (384), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 72/74 (97%), Positives = 74/74 (100%)
Query: 25 KQASWEELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGM 84
KQASWEELEEAFSVFDGDGDGFISPLELQ+VMRRLGLQHDAGHEECERMLKVFDRDGDGM
Sbjct: 73 KQASWEELEEAFSVFDGDGDGFISPLELQNVMRRLGLQHDAGHEECERMLKVFDRDGDGM 132
Query: 85 INFDEFKVMMQGVI 98
INFDEFKVMMQGV+
Sbjct: 133 INFDEFKVMMQGVV 146
>Os12g0140200 Zinc finger, RING-type domain containing protein
Length = 328
Score = 146 bits (368), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 76/91 (83%)
Query: 7 EGDECSXXXXXXXXXXXXKQASWEELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAG 66
EGDE S KQASWEELEEAFSVFDGDGDGFISPLELQ+VMRRL LQ DAG
Sbjct: 228 EGDERSLVEDEALVLLEEKQASWEELEEAFSVFDGDGDGFISPLELQNVMRRLCLQRDAG 287
Query: 67 HEECERMLKVFDRDGDGMINFDEFKVMMQGV 97
HEECERMLKVFDRDGDGMINFDEFKVMMQGV
Sbjct: 288 HEECERMLKVFDRDGDGMINFDEFKVMMQGV 318
>Os03g0812800
Length = 200
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 25 KQASWEELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGM 84
K A EL EAF VFD DGDG++S EL+SV+RRLG++ A H +C RM+ D DGDG
Sbjct: 127 KVAGEGELREAFRVFDRDGDGYVSAAELRSVLRRLGMEEGARHGDCVRMIAAHDGDGDGR 186
Query: 85 INFDEFKVMMQ 95
I+F EF+ MM+
Sbjct: 187 ISFQEFRAMME 197
>Os03g0812400 EF-Hand type domain containing protein
Length = 213
Score = 76.6 bits (187), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 25 KQASWEELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGM 84
K A EL EAF VFD D DG++S EL +VMRRLG++ A + +C RM+ +D DGDG
Sbjct: 140 KVAGEGELREAFYVFDRDEDGYVSAAELWNVMRRLGIEEGARYGDCVRMIAAYDGDGDGR 199
Query: 85 INFDEFKVMMQGVI 98
I+F EF+ MM+ +
Sbjct: 200 ISFQEFRAMMENAV 213
>Os12g0228800 Similar to Calmodulin-like protein
Length = 168
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 30 EELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGMINFDE 89
E + EAF+VFD +GDGFI+ EL+SV+ LGL+H ++C RM+ + D DGDG ++F E
Sbjct: 94 EGMREAFNVFDQNGDGFITVDELRSVLSSLGLKHGRTADDCRRMISMVDADGDGRVDFKE 153
Query: 90 FKVMMQG 96
FK MM+G
Sbjct: 154 FKQMMRG 160
>Os03g0813500
Length = 207
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 38 VFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGMINFDEFKVMMQ 95
VFD DGDG++S EL+SV+RRLG++ A H +C RM+ D DGDG I+F EF+ MM+
Sbjct: 147 VFDRDGDGYVSAAELRSVLRRLGMEEGARHGDCVRMIAAHDGDGDGRISFQEFRAMME 204
>Os05g0380900 Similar to Polcalcin Jun o 2 (Calcium-binding pollen allergen Jun o
2)
Length = 201
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 30 EELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGMINFDE 89
E+L AF VFD DG+G I+P EL V+R G+ A +C RM+ DR+GDG+INF+E
Sbjct: 128 EDLRHAFGVFDADGNGVITPAELARVLR--GIGEAATVAQCRRMIDGVDRNGDGLINFEE 185
Query: 90 FKVMM 94
FK+MM
Sbjct: 186 FKLMM 190
>Os07g0223900
Length = 192
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%)
Query: 25 KQASWEELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGM 84
K AS EL++AF VFD + DGFI EL SVMRRLG + +E+C RM+ FD D DG
Sbjct: 114 KMASEGELKDAFYVFDRNEDGFICASELWSVMRRLGFKEGQRYEDCMRMIHTFDEDRDGR 173
Query: 85 INFDEFKVMMQ 95
I++ EF+ MM+
Sbjct: 174 ISYLEFRRMME 184
>Os03g0743500 Similar to Calmodulin 1 (Fragment)
Length = 154
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 30 EELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGMINFDE 89
EEL+EAF V D D +GFISP EL++VM LG EE E+M++ D DGDG +N+DE
Sbjct: 83 EELKEAFEVLDKDQNGFISPTELRTVMTNLG--EKMTDEEVEQMIREADTDGDGQVNYDE 140
Query: 90 FKVMMQGV 97
F +MM+
Sbjct: 141 FVIMMKNA 148
>Os03g0331700 Similar to Avr9/Cf-9 rapidly elicited protein 31
Length = 197
Score = 68.9 bits (167), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 31 ELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGMINFDEF 90
+++EAF VFD DGDGFIS ELQ+V+++LGL + M+ DRD DG ++F EF
Sbjct: 126 DMKEAFRVFDEDGDGFISAAELQAVLKKLGLPEARNLATVQEMICNVDRDCDGRVDFGEF 185
Query: 91 KVMMQGVI 98
K MMQG+
Sbjct: 186 KCMMQGIT 193
>Os04g0492800 Similar to Calmodulin (CaM)
Length = 250
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 31 ELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGMINFDEF 90
++ EAF VFD +GDG+I+ EL +V+ LGL+ EEC RM+ DRDGDG ++F EF
Sbjct: 178 DMREAFRVFDANGDGYITVDELGAVLASLGLKQGRTAEECRRMIGQVDRDGDGRVDFHEF 237
Query: 91 KVMMQG 96
MM+G
Sbjct: 238 LQMMRG 243
>Os09g0412300 Calcium-binding EF-hand domain containing protein
Length = 75
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 25 KQASWEELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGM 84
++A+ E AF VFD +GDGFI EL SV+ LG AGH EC+RM+ +D D DG
Sbjct: 1 EEATLGEAAAAFRVFDRNGDGFIDAGELGSVLASLGFAAGAGHAECQRMIDAYDADKDGR 60
Query: 85 INFDEFKVMMQ 95
++F EF M+
Sbjct: 61 VDFREFLKFME 71
>Os07g0681400 Similar to Calcium-binding protein CAST
Length = 197
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%)
Query: 32 LEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGMINFDEFK 91
++EAF VFD DGDGFIS ELQ V+++LG+ M+ DRD DG ++F EFK
Sbjct: 127 MKEAFKVFDVDGDGFISASELQEVLKKLGMPEAGSLANVREMICNVDRDSDGRVDFGEFK 186
Query: 92 VMMQGVI 98
MMQG+
Sbjct: 187 CMMQGIT 193
>Os08g0144100 Similar to Avr9/Cf-9 rapidly elicited protein 31
Length = 196
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%)
Query: 32 LEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGMINFDEFK 91
+ EAF VFD DGDGFIS ELQ V+++LGL M+ DR+ DG ++F EFK
Sbjct: 126 MREAFKVFDVDGDGFISASELQEVLKKLGLPEAGSLATVREMICNVDRNSDGRVDFGEFK 185
Query: 92 VMMQGVI 98
MMQG+
Sbjct: 186 SMMQGIT 192
>Os06g0172200 Parvalbumin family protein
Length = 236
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 31 ELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHE---ECERMLKVFDRDGDGMINF 87
+L EAF VFDG+ DG IS EL +V+ LGL+ G EC M+++ D DGDGM++F
Sbjct: 165 DLREAFDVFDGNKDGLISAEELGTVLESLGLRQHGGRPAVAECRDMIRLVDSDGDGMVSF 224
Query: 88 DEFKVMMQGV 97
+EFK MM V
Sbjct: 225 EEFKRMMTVV 234
>Os01g0949500 Similar to Calmodulin (CaM)
Length = 185
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 27 ASWEELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGMIN 86
A E+L AF VFD DG+G IS EL V+ GL A ++C RM++ D++GDG+I+
Sbjct: 110 AVEEDLRHAFRVFDADGNGTISAAELARVLH--GLGEKATVQQCRRMIEGVDQNGDGLIS 167
Query: 87 FDEFKVMMQG 96
F+EFKVMM G
Sbjct: 168 FEEFKVMMAG 177
>Os05g0312600 EF-Hand type domain containing protein
Length = 197
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 31 ELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGMINFDEF 90
++ EAF VFD DGDG+IS ELQ+V+ R+GL A M+ DRD DG ++++EF
Sbjct: 130 DMREAFGVFDEDGDGYISAAELQAVLSRMGLPEAACMARVRDMIAAADRDSDGRVDYEEF 189
Query: 91 KVMM 94
K MM
Sbjct: 190 KAMM 193
>Os01g0279300 Similar to Calmodulin 1 (Fragment)
Length = 149
Score = 65.5 bits (158), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 28 SWEELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGMINF 87
S EEL+EAF VFD D +GFIS EL+ VM LG EE E M++ D DGDG IN+
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVEEMIREADVDGDGQINY 139
Query: 88 DEF-KVMM 94
DEF KVMM
Sbjct: 140 DEFVKVMM 147
>Os05g0491100 Similar to Calmodulin
Length = 149
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 28 SWEELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGMINF 87
S EEL+EAF VFD D +GFIS EL+ VM LG EE + M++ D DGDG IN+
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINY 139
Query: 88 DEF-KVMM 94
+EF KVMM
Sbjct: 140 EEFVKVMM 147
>Os07g0687200 Calmodulin (CaM)
Length = 149
Score = 62.4 bits (150), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 28 SWEELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGMINF 87
S EEL+EAF VFD D +GFIS EL+ VM LG EE + M++ D DGDG IN+
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINY 139
Query: 88 DEF-KVMM 94
+EF KVMM
Sbjct: 140 EEFVKVMM 147
>Os03g0319300 Calmodulin (CaM)
Length = 149
Score = 62.4 bits (150), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 28 SWEELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGMINF 87
S EEL+EAF VFD D +GFIS EL+ VM LG EE + M++ D DGDG IN+
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINY 139
Query: 88 DEF-KVMM 94
+EF KVMM
Sbjct: 140 EEFVKVMM 147
>Os01g0267900 Similar to Calmodulin NtCaM3 (Calmodulin NtCaM4) (Calmodulin
NtCaM5) (Calmodulin NtCaM6) (Calmodulin NtCaM7)
(Calmodulin NtCaM8) (Calmodulin NtCaM11) (Calmodulin
NtCaM12)
Length = 149
Score = 62.4 bits (150), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 28 SWEELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGMINF 87
S EEL+EAF VFD D +GFIS EL+ VM LG EE + M++ D DGDG IN+
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINY 139
Query: 88 DEF-KVMM 94
+EF KVMM
Sbjct: 140 EEFVKVMM 147
>Os12g0603800 Similar to Calmodulin NtCaM13
Length = 166
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 30 EELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGMINFDE 89
EEL EAF VFD D DG IS EL+ VM LG EE E+M++ D DGDG +NFDE
Sbjct: 99 EELREAFKVFDKDQDGLISAAELRHVMISLG--EKLTDEEVEQMIREADLDGDGQVNFDE 156
Query: 90 FKVMM 94
F MM
Sbjct: 157 FVRMM 161
>Os01g0135700 Flagellar calcium-binding protein (calflagin) family protein
Length = 181
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 31 ELEEAFSVFDGDGDGFISPLELQSVMRRLGLQHDAGHEECERMLKVFDRDGDGMINFDEF 90
EL AF V+D DGDG I+ EL V+ R+G A EECERM+ D DGDG + F+EF
Sbjct: 104 ELRAAFDVYDVDGDGRITAAELGKVLGRIGEGCSA--EECERMIASVDVDGDGCVGFEEF 161
Query: 91 KVMM 94
K MM
Sbjct: 162 KKMM 165
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.138 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,443,633
Number of extensions: 132342
Number of successful extensions: 804
Number of sequences better than 1.0e-10: 28
Number of HSP's gapped: 811
Number of HSP's successfully gapped: 28
Length of query: 98
Length of database: 17,035,801
Length adjustment: 67
Effective length of query: 31
Effective length of database: 13,537,463
Effective search space: 419661353
Effective search space used: 419661353
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 149 (62.0 bits)