Os12g0140000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os12g0140000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 155.22 | 0.585 | 6.38 | 0.865 | 1.93 | -0.634 | -2.15 | 9.36 | -0.0278 | 22 | 29.1 | 3707 | -- | -- |
| 159.21 | 0.588 | 6.56 | -0.649 | 1.93 | 0.471 | -2.02 | -- | -0.112 | 22.1 | 30.61 | 3457 | -- | -- |
| 172.96 | 0.613 | 6.4 | 0.77 | 1.93 | -0.632 | -- | 9.15 | -0.104 | 22.2 | 30.4 | 3698 | -- | -- |
| 176.32 | 0.618 | 6.55 | -0.591 | 1.92 | 0.477 | -- | -- | -0.0915 | 22.2 | 30.48 | 3360 | -- | -- |
| 392.48 | 0.923 | 6.34 | 0.605 | -- | -0.199 | -- | 8.54 | -0.0351 | -- | 30.42 | 2233 | -- | -- |
| 166.91 | 0.606 | 6.57 | -0.549 | 1.95 | -- | -2.04 | -- | -0.17 | 22.1 | -- | -- | -- | -- |
| 183.14 | 0.634 | 6.57 | -0.472 | 1.95 | -- | -- | -- | -0.167 | 22.2 | -- | -- | -- | -- |
| 348.41 | 0.869 | 6.56 | -0.817 | -- | 1.52 | -- | -- | -0.346 | -- | 23.8 | 791 | -- | -- |
| 184.76 | 0.633 | 6.54 | -- | 1.93 | 0.359 | -- | -- | -0.0483 | 22.2 | 30.59 | 3352 | -- | -- |
| 414.53 | 0.951 | 6.52 | -0.443 | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
| 189 | 0.643 | 6.56 | -- | 1.95 | -- | -- | -- | -0.114 | 22.2 | -- | -- | -- | -- |
| 364.89 | 0.89 | 6.53 | -- | -- | 1.35 | -- | -- | -0.232 | -- | 24 | 782 | -- | -- |
| 419.71 | 0.956 | 6.51 | -- | -- | -- | -- | -- | -0.113 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 144.86 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 18 | 10 |
| 2 | 145.22 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 8 |
| 4 | 145.47 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 8 | 146.08 | humidity | 60.0 | 30 | > th | dose independent | rect. | 6 | 14 |
| 9 | 146.08 | temperature | 30.0 | 720 | < th | dose independent | rect. | 21 | 17 |
| 11 | 146.13 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 20 | 8 |
| 12 | 146.18 | temperature | 15.0 | 30 | > th | dose independent | rect. | 20 | 8 |
| 17 | 146.37 | humidity | 60.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 26 | 146.66 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 29 | 147.01 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 38 | 147.49 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 40 | 147.57 | radiation | 10.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 42 | 147.62 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 15 |
| 45 | 147.81 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 12 | 9 |
| 50 | 147.92 | radiation | 20.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 61 | 148.12 | wind | 1.0 | 10 | > th | dose independent | rect. | 5 | 15 |
| 62 | 148.14 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 69 | 148.31 | temperature | 15.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 76 | 148.43 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 14 |
| 79 | 148.49 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 82 | 148.56 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 88 | 148.69 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 15 | 8 |
| 90 | 148.72 | radiation | 40.0 | 720 | < th | dose independent | rect. | 1 | 8 |
| 95 | 148.90 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 16 |
| 121 | 149.23 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 20 | 18 |
| 122 | 149.24 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 128 | 149.30 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 14 |
| 129 | 149.30 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 132 | 149.32 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 133 | 149.32 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 140 | 149.32 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 142 | 149.32 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 156 | 149.49 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 157 | 149.50 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 10 |
| 159 | 149.50 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 161 | 149.53 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 14 | 8 |
| 165 | 149.56 | humidity | 70.0 | 270 | > th | dose independent | rect. | 18 | 10 |
| 167 | 149.57 | radiation | 1.0 | 270 | < th | dose independent | rect. | 18 | 10 |
| 180 | 149.72 | temperature | 30.0 | 720 | < th | dose independent | sin | 7 | NA |
| 185 | 149.75 | temperature | 15.0 | 270 | > th | dose independent | rect. | 20 | 16 |
| 186 | 149.78 | temperature | 15.0 | 30 | > th | dose independent | rect. | 20 | 19 |
| 192 | 149.87 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 2 | 12 |
| 195 | 149.90 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 16 |
| 198 | 149.90 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 16 |
| 201 | 149.92 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 18 | 10 |
| 207 | 149.95 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 16 | 23 |
| 213 | 149.97 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 214 | 149.97 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 8 |
| 218 | 149.97 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 236 | 149.97 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 238 | 149.97 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 16 |
| 269 | 150.01 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 10 |
| 271 | 150.01 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 272 | 150.01 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 10 |
| 277 | 150.03 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 10 |
| 281 | 150.03 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 14 |
| 282 | 150.03 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 14 |
| 284 | 150.04 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 8 |
| 285 | 150.04 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 8 |
| 290 | 150.10 | temperature | 15.0 | 270 | > th | dose independent | rect. | 22 | 14 |
| 292 | 150.11 | humidity | 80.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 298 | 150.16 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 305 | 150.18 | radiation | 40.0 | 720 | < th | dose independent | rect. | 17 | 16 |
| 315 | 150.23 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 10 |
| 318 | 150.26 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 10 |
| 330 | 150.33 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 7 | 7 |
| 332 | 150.35 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 335 | 150.35 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 339 | 150.35 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 344 | 150.35 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 345 | 150.35 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 351 | 150.35 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 381 | 150.40 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 385 | 150.44 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 390 | 150.47 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 393 | 150.47 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 397 | 150.47 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 403 | 150.47 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 404 | 150.47 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 416 | 150.47 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 16 |
| 434 | 150.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 14 |
| 435 | 150.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 14 |
| 463 | 150.70 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 466 | 150.72 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 494 | 150.77 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 20 | 10 |
| 501 | 150.78 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 8 |
| 526 | 150.87 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 557 | 150.98 | radiation | 30.0 | 720 | > th | dose independent | rect. | 16 | 16 |
| 562 | 151.01 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 20 | 19 |
| 609 | 151.11 | radiation | 30.0 | 720 | > th | dose independent | rect. | 7 | 1 |
| 625 | 151.13 | radiation | 40.0 | 270 | < th | dose independent | sin | 11 | NA |
| 661 | 151.27 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 666 | 151.28 | temperature | 10.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 670 | 151.29 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 687 | 151.33 | temperature | 15.0 | 30 | > th | dose independent | rect. | 20 | 21 |
| 698 | 151.37 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 728 | 151.48 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 731 | 151.49 | temperature | 30.0 | 720 | < th | dose independent | rect. | 6 | 18 |
| 736 | 151.51 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 16 |
| 740 | 151.53 | radiation | 30.0 | 30 | < th | dose independent | rect. | 4 | 7 |
| 795 | 151.62 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 9 | 14 |
| 797 | 151.63 | radiation | 20.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 802 | 151.64 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 3 | 12 |
| 807 | 151.66 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 855 | 151.75 | temperature | 20.0 | 30 | > th | dose independent | rect. | 9 | 6 |
| 863 | 151.77 | wind | 9.0 | 30 | < th | dose independent | rect. | 6 | 14 |
| 864 | 151.77 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 877 | 151.80 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 895 | 151.84 | wind | 1.0 | 270 | < th | dose independent | rect. | 9 | 2 |
| 898 | 151.84 | temperature | 30.0 | 720 | < th | dose independent | rect. | 21 | 21 |
| 925 | 151.90 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 18 |
| 943 | 151.95 | radiation | 10.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 954 | 151.97 | humidity | 80.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 964 | 151.98 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 12 | 11 |
| 983 | 152.03 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 9 | 19 |
| 986 | 152.04 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 4 |