Os05g0380900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Polcalcin Jun o 2 (Calcium-binding pollen allergen Jun o 2).
FiT-DB / Search/ Help/ Sample detail
|
Os05g0380900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Polcalcin Jun o 2 (Calcium-binding pollen allergen Jun o 2).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 140.19 | 0.556 | 9.23 | -0.943 | 0.223 | 0.771 | -2.13 | -1.07 | 0.00207 | 18.8 | 33.3 | 1093 | -- | -- |
| 140.27 | 0.552 | 9.22 | -0.778 | 0.227 | 0.683 | -2.15 | -- | -0.00136 | 18.7 | 33.78 | 1106 | -- | -- |
| 151.77 | 0.574 | 9.23 | -0.842 | 0.218 | 0.732 | -- | -0.619 | -0.00469 | 18.9 | 33.6 | 1109 | -- | -- |
| 151.79 | 0.574 | 9.22 | -0.755 | 0.222 | 0.662 | -- | -- | -0.00275 | 18.9 | 33.6 | 1116 | -- | -- |
| 154.25 | 0.578 | 9.24 | -0.966 | -- | 0.842 | -- | -1.55 | -0.00957 | -- | 33.7 | 1101 | -- | -- |
| 160.2 | 0.593 | 9.24 | -0.65 | 0.22 | -- | -2.15 | -- | -0.1 | 18.8 | -- | -- | -- | -- |
| 171.43 | 0.613 | 9.24 | -0.617 | 0.23 | -- | -- | -- | -0.108 | 20.5 | -- | -- | -- | -- |
| 154.32 | 0.579 | 9.21 | -0.755 | -- | 0.667 | -- | -- | -0.00398 | -- | 33.6 | 1106 | -- | -- |
| 166.48 | 0.601 | 9.21 | -- | 0.238 | 0.57 | -- | -- | 0.0553 | 18.8 | 33.69 | 1115 | -- | -- |
| 174.39 | 0.617 | 9.24 | -0.618 | -- | -- | -- | -- | -0.11 | -- | -- | -- | -- | -- |
| 181.47 | 0.63 | 9.23 | -- | 0.233 | -- | -- | -- | -0.0392 | 20.3 | -- | -- | -- | -- |
| 169.15 | 0.606 | 9.2 | -- | -- | 0.573 | -- | -- | 0.0575 | -- | 33.7 | 1092 | -- | -- |
| 184.47 | 0.634 | 9.22 | -- | -- | -- | -- | -- | -0.0416 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 133.15 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 17 |
| 4 | 134.88 | temperature | 15.0 | 90 | > th | dose independent | rect. | 20 | 19 |
| 5 | 135.74 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 7 | 135.84 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 8 | 136.08 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 22 | 136.50 | wind | 7.0 | 90 | < th | dose independent | rect. | 20 | 19 |
| 23 | 136.67 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 20 | 19 |
| 24 | 136.70 | temperature | 15.0 | 270 | > th | dose independent | rect. | 20 | 17 |
| 26 | 137.01 | wind | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 27 | 137.04 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 44 | 137.19 | wind | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 46 | 137.32 | wind | 1.0 | 90 | > th | dose independent | rect. | 20 | 19 |
| 48 | 137.49 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 5 |
| 49 | 137.50 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 5 |
| 51 | 137.50 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 15 | 5 |
| 54 | 137.57 | wind | 1.0 | 90 | > th | dose independent | rect. | 15 | 5 |
| 56 | 137.62 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 20 | 19 |
| 57 | 137.80 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 59 | 137.97 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 5 |
| 61 | 137.98 | wind | 5.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 63 | 138.03 | wind | 7.0 | 270 | < th | dose independent | rect. | 20 | 17 |
| 80 | 138.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 9 |
| 81 | 138.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 9 |
| 83 | 138.19 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 15 |
| 85 | 138.31 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 86 | 138.35 | wind | 5.0 | 90 | < th | dose independent | rect. | 11 | 16 |
| 88 | 138.38 | wind | 7.0 | 270 | < th | dose independent | rect. | 9 | 15 |
| 90 | 138.44 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 16 | 5 |
| 96 | 138.64 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 97 | 138.68 | wind | 5.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 99 | 138.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 100 | 138.71 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 107 | 138.84 | wind | 1.0 | 90 | > th | dose dependent | rect. | 15 | 5 |
| 108 | 138.85 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 20 | 19 |
| 109 | 138.85 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 20 | 19 |
| 114 | 138.93 | radiation | 30.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 118 | 138.96 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 133 | 139.15 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 135 | 139.16 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 23 |
| 149 | 139.31 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 19 |
| 157 | 139.42 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 9 |
| 172 | 139.59 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 176 | 139.60 | radiation | 20.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 177 | 139.61 | wind | 7.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 191 | 139.75 | wind | 9.0 | 90 | < th | dose dependent | rect. | 11 | 16 |
| 200 | 139.79 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 7 |
| 205 | 139.79 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 7 |
| 206 | 139.80 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 15 | 5 |
| 221 | 139.93 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 252 | 140.15 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 253 | 140.16 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 17 |
| 261 | 140.24 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 262 | 140.24 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 263 | 140.25 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 280 | 140.28 | wind | 7.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 287 | 140.34 | wind | 9.0 | 270 | < th | dose dependent | rect. | 9 | 15 |
| 293 | 140.38 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 15 | 5 |
| 295 | 140.39 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 306 | 140.42 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 5 |
| 309 | 140.42 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 5 |
| 311 | 140.44 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 331 | 140.60 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 9 |
| 333 | 140.60 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 9 |
| 334 | 140.60 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 9 |
| 339 | 140.61 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 340 | 140.62 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 17 |
| 346 | 140.65 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 347 | 140.65 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 18 | 2 |
| 373 | 140.71 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 8 |
| 400 | 140.79 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 18 | 2 |
| 416 | 140.86 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 434 | 140.90 | wind | 3.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 460 | 140.98 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 15 |
| 462 | 140.98 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 15 |
| 463 | 140.99 | temperature | 20.0 | 270 | > th | dose independent | rect. | 16 | 1 |
| 468 | 141.01 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 472 | 141.03 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 18 |
| 474 | 141.03 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 488 | 141.05 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 1 |
| 490 | 141.05 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 511 | 141.10 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 20 | 19 |
| 527 | 141.15 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 1 |
| 543 | 141.20 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 544 | 141.20 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 6 |
| 545 | 141.20 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 547 | 141.20 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 553 | 141.22 | wind | 1.0 | 270 | > th | dose independent | rect. | 16 | 1 |
| 577 | 141.23 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 582 | 141.25 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 11 |
| 589 | 141.28 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 4 |
| 620 | 141.31 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 10 |
| 629 | 141.34 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 635 | 141.36 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 11 |
| 647 | 141.39 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 686 | 141.44 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 696 | 141.45 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 712 | 141.50 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 725 | 141.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 729 | 141.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 738 | 141.57 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 14 | 6 |
| 755 | 141.62 | wind | 9.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 761 | 141.64 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 8 |
| 769 | 141.69 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 772 | 141.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 2 |
| 776 | 141.70 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 17 | 4 |
| 786 | 141.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 2 |
| 804 | 141.72 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 844 | 141.79 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 854 | 141.83 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 894 | 141.92 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 914 | 141.95 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 917 | 141.96 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 967 | 142.08 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 988 | 142.10 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 991 | 142.11 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 3 |