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Os01g0267900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Calmodulin NtCaM3 (Calmodulin NtCaM4) (Calmodulin NtCaM5) (Calmodulin NtCaM6) (Calmodulin NtCaM7) (Calmodulin NtCaM8) (Calmodulin NtCaM11) (Calmodulin NtCaM12).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.3 (0.0158) R2 : 0.729
β1 : 1.47 (0.0578) R2dD : 0.397 R2D : 0.222
β2 : 0.657 (0.0375) R2dC : 0.183 R2C : 0.126
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.683 (0.0337) R2dN8 : 0.327 R2N8 : 0.138
σ : 0.297
deviance : 40.16
__
_____
C
peak time of C : 0.516
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
31.29 0.263 12.3 0.973 0.653 0.433 0.193 -1.05 0.495 0.475 19.8 3207 -- --
32.57 0.266 12.3 1.08 0.618 0.703 0.245 -- 0.512 0.421 19.55 3309 -- --
31.45 0.261 12.3 0.97 0.653 0.433 -- -1.04 0.496 0.489 19.8 3205 -- --
32.62 0.266 12.3 1.1 0.649 0.696 -- -- 0.528 0.448 19.6 2973 -- --
56.26 0.349 12.3 0.946 -- 0.474 -- -1.08 0.485 -- 20.66 2494 -- --
39.97 0.296 12.3 1.48 0.658 -- 0.214 -- 0.684 0.494 -- -- -- --
40.16 0.297 12.3 1.47 0.657 -- -- -- 0.683 0.516 -- -- -- --
57.1 0.352 12.3 1.08 -- 0.755 -- -- 0.484 -- 19.5 2417 -- --
35.11 0.276 12.3 -- 0.672 1.32 -- -- 0.257 0.546 18.37 27742 -- --
67.26 0.383 12.3 1.49 -- -- -- -- 0.694 -- -- -- -- --
96.89 0.46 12.3 -- 0.679 -- -- -- 0.519 0.623 -- -- -- --
59.61 0.36 12.3 -- -- 1.37 -- -- 0.256 -- 17.04 47520 -- --
125.81 0.524 12.3 -- -- -- -- -- 0.528 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.96 wind 3 43200 < th dose dependent rect. 20 3
8 30.35 temperature 20 4320 > th dose independent rect. 21 1
9 30.36 wind 1 43200 < th dose independent rect. 23 3
10 30.37 radiation 20 14400 < th dose dependent rect. 21 8
12 30.38 humidity 90 14400 > th dose dependent rect. 24 16
13 30.40 temperature 20 4320 < th dose independent rect. 21 1
14 30.40 radiation 1 14400 < th dose dependent rect. 23 6
17 30.41 humidity 90 14400 > th dose dependent rect. 5 1
30 30.49 wind 1 43200 > th dose independent rect. 23 3
52 30.58 humidity 90 14400 > th dose dependent rect. 4 3
65 30.64 wind 1 43200 < th dose independent rect. 21 5
78 30.70 wind 1 43200 < th dose dependent rect. 24 1
83 30.72 humidity 90 14400 > th dose dependent rect. 2 6
93 30.75 radiation 1 14400 > th dose independent rect. 18 11
97 30.76 radiation 1 14400 > th dose independent rect. 18 1
108 30.77 wind 1 43200 < th dose dependent rect. 23 3
112 30.78 humidity 90 14400 > th dose dependent sin 5 NA
117 30.79 humidity 90 14400 > th dose independent rect. 23 1
132 30.84 humidity 90 14400 < th dose independent rect. 24 1
134 30.84 humidity 90 43200 > th dose dependent rect. 13 1
155 30.89 humidity 60 43200 < th dose dependent rect. 19 14
160 30.91 wind 3 43200 < th dose independent rect. 20 1
165 30.93 wind 1 43200 > th dose independent rect. 24 1
166 30.93 wind 3 43200 < th dose independent rect. 19 3
170 30.94 humidity 60 43200 > th dose independent rect. 19 3
175 30.95 wind 1 43200 < th dose independent rect. 19 7
177 30.96 wind 3 43200 > th dose independent rect. 20 1
178 30.96 temperature 25 4320 > th dose independent rect. 11 3
181 30.96 radiation 1 43200 < th dose dependent rect. 3 2
189 30.98 temperature 25 4320 > th dose independent rect. 12 1
190 30.98 humidity 60 43200 < th dose independent rect. 19 2
192 30.98 humidity 60 43200 < th dose independent rect. 19 8
193 30.98 radiation 1 43200 < th dose independent rect. 18 11
210 31.01 wind 3 43200 < th dose dependent rect. 8 1
215 31.02 humidity 90 14400 > th dose dependent rect. 24 1
220 31.02 wind 1 43200 < th dose dependent rect. 13 13
230 31.06 wind 3 43200 > th dose independent rect. 11 3
237 31.07 wind 1 43200 < th dose independent rect. 24 1
238 31.07 wind 3 43200 > th dose independent rect. 19 3
240 31.07 temperature 10 1440 > th dose dependent rect. 19 2
242 31.07 humidity 90 14400 > th dose dependent rect. 12 18
246 31.08 temperature 30 1440 < th dose dependent rect. 19 2
247 31.08 temperature 10 1440 > th dose dependent rect. 18 4
248 31.09 temperature 25 4320 < th dose independent rect. 11 2
250 31.09 temperature 25 4320 < th dose independent rect. 10 5
251 31.09 humidity 60 43200 > th dose independent rect. 19 8
257 31.10 wind 3 43200 < th dose independent rect. 11 3
263 31.11 atmosphere 1005 43200 < th dose independent rect. 19 3
265 31.11 wind 3 43200 < th dose independent rect. 8 6
268 31.11 humidity 90 14400 > th dose dependent rect. 23 4
293 31.13 temperature 15 43200 < th dose dependent rect. 2 1
295 31.13 atmosphere 1000 43200 > th dose dependent rect. 23 1
299 31.14 radiation 30 43200 < th dose independent rect. 9 1
318 31.15 humidity 90 14400 > th dose independent rect. 22 6
335 31.16 wind 3 43200 < th dose dependent rect. 8 4
340 31.17 radiation 1 43200 < th dose independent rect. 18 8
347 31.17 wind 1 43200 < th dose dependent rect. 11 15
355 31.18 humidity 60 43200 > th dose independent rect. 19 17
356 31.18 wind 3 43200 < th dose dependent rect. 11 1
366 31.19 radiation 1 43200 < th dose independent rect. 18 1
385 31.20 humidity 70 43200 < th dose dependent rect. 19 7
391 31.21 wind 3 43200 > th dose independent rect. 9 5
392 31.21 atmosphere 1015 43200 < th dose dependent rect. 23 1
423 31.23 wind 7 43200 > th dose dependent rect. 9 6
429 31.24 humidity 60 43200 < th dose dependent rect. 19 2
441 31.25 temperature 20 1440 < th dose independent rect. 5 1
466 31.27 wind 9 43200 > th dose independent rect. 9 6
469 31.27 temperature 20 4320 < th dose independent rect. 17 13
515 31.29 humidity 50 43200 > th dose dependent rect. 19 1
536 31.30 wind 9 43200 < th dose independent rect. 8 7
537 31.30 humidity 90 14400 > th dose independent rect. 22 9
553 31.31 temperature 20 4320 > th dose independent sin 13 NA
555 31.31 wind 7 43200 < th dose independent rect. 5 1
557 31.31 temperature 20 1440 > th dose independent rect. 5 1
567 31.31 humidity 60 43200 < th dose independent rect. 18 15
587 31.32 radiation 40 43200 < th dose independent rect. 13 1
593 31.32 humidity 60 43200 < th dose independent rect. 19 17
594 31.32 humidity 50 43200 > th dose independent rect. 14 19
615 31.33 temperature 20 4320 < th dose independent sin 13 NA
688 31.35 atmosphere 1005 43200 < th dose independent rect. 21 2
695 31.35 humidity 90 43200 < th dose dependent rect. 19 1
733 31.36 atmosphere 1000 43200 > th dose dependent sin 16 NA
737 31.36 atmosphere 1000 43200 > th dose dependent rect. 17 1
768 31.37 atmosphere 1000 43200 > th dose dependent sin 14 NA
771 31.37 atmosphere 1000 43200 > th dose dependent rect. 15 1
811 31.38 humidity 60 43200 < th dose independent sin 9 NA
813 31.38 atmosphere 1005 43200 < th dose independent rect. 9 5
843 31.38 temperature 10 1440 > th dose dependent rect. 17 12
861 31.39 atmosphere 1005 43200 > th dose independent rect. 19 3
863 31.39 radiation 20 43200 > th dose independent rect. 6 4
954 31.40 humidity 60 43200 > th dose independent sin 9 NA
956 31.40 radiation 20 14400 > th dose independent rect. 6 1
972 31.40 radiation 30 43200 < th dose independent rect. 22 9