Os05g0491100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Calmodulin.
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Os05g0491100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Calmodulin.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.88 | 0.169 | 14.5 | -0.207 | 0.386 | 0.348 | -0.539 | -0.0549 | -0.0841 | 0.995 | 20.9 | 845 | -- | -- |
| 12.87 | 0.167 | 14.5 | -0.197 | 0.387 | 0.348 | -0.557 | -- | -0.086 | 0.982 | 21.1 | 849 | -- | -- |
| 14.02 | 0.174 | 14.5 | -0.216 | 0.4 | 0.331 | -- | -0.163 | -0.0957 | 1.01 | 21.1 | 851 | -- | -- |
| 14.15 | 0.175 | 14.5 | -0.177 | 0.385 | 0.357 | -- | -- | -0.0841 | 1.09 | 21.13 | 846 | -- | -- |
| 22.8 | 0.222 | 14.5 | -0.259 | -- | 0.436 | -- | -0.25 | -0.118 | -- | 21.21 | 879 | -- | -- |
| 16.67 | 0.191 | 14.5 | -0.063 | 0.432 | -- | -0.6 | -- | 0.00621 | 0.737 | -- | -- | -- | -- |
| 18.2 | 0.2 | 14.5 | -0.0406 | 0.433 | -- | -- | -- | 0.00928 | 0.742 | -- | -- | -- | -- |
| 22.98 | 0.223 | 14.5 | -0.19 | -- | 0.449 | -- | -- | -0.104 | -- | 21.2 | 886 | -- | -- |
| 14.88 | 0.18 | 14.5 | -- | 0.387 | 0.303 | -- | -- | -0.0568 | 1.03 | 21.2 | 831 | -- | -- |
| 29.95 | 0.256 | 14.5 | -0.025 | -- | -- | -- | -- | 0.0171 | -- | -- | -- | -- | -- |
| 18.25 | 0.2 | 14.5 | -- | 0.433 | -- | -- | -- | 0.0138 | 0.738 | -- | -- | -- | -- |
| 23.9 | 0.228 | 14.5 | -- | -- | 0.397 | -- | -- | -0.0744 | -- | 21.2 | 874 | -- | -- |
| 29.96 | 0.255 | 14.5 | -- | -- | -- | -- | -- | 0.0199 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.90 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 15 |
| 2 | 11.91 | temperature | 20.0 | 90 | > th | dose dependent | sin | 6 | NA |
| 6 | 11.99 | temperature | 30.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 41 | 12.29 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 48 | 12.34 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 51 | 12.36 | temperature | 25.0 | 90 | > th | dose independent | sin | 5 | NA |
| 59 | 12.42 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 61 | 12.44 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 62 | 12.45 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 69 | 12.50 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 74 | 12.52 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 5 | 5 |
| 75 | 12.53 | temperature | 25.0 | 90 | < th | dose independent | sin | 5 | NA |
| 80 | 12.55 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 92 | 12.59 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 94 | 12.60 | wind | 9.0 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 95 | 12.60 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 105 | 12.64 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 112 | 12.67 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 125 | 12.70 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 126 | 12.70 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 129 | 12.70 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 150 | 12.75 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 161 | 12.78 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 16 |
| 166 | 12.79 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 171 | 12.80 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 17 |
| 177 | 12.81 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 188 | 12.83 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 195 | 12.85 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 14 |
| 209 | 12.90 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 216 | 12.91 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 16 |
| 228 | 12.92 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 12 |
| 248 | 12.95 | wind | 9.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 258 | 12.97 | temperature | 25.0 | 90 | > th | dose independent | rect. | 6 | 5 |
| 264 | 12.97 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 275 | 12.99 | temperature | 25.0 | 90 | > th | dose independent | rect. | 5 | 8 |
| 345 | 13.06 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 365 | 13.09 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 14 |
| 379 | 13.11 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 380 | 13.11 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 20 |
| 390 | 13.12 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 403 | 13.13 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 20 |
| 413 | 13.14 | wind | 9.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 447 | 13.16 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 469 | 13.17 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 7 |
| 470 | 13.17 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 471 | 13.18 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 499 | 13.20 | wind | 9.0 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 507 | 13.20 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 523 | 13.21 | wind | 9.0 | 43200 | > th | dose independent | rect. | 1 | 16 |
| 527 | 13.21 | wind | 9.0 | 43200 | > th | dose independent | rect. | 21 | 20 |
| 555 | 13.23 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 4 |
| 584 | 13.24 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 600 | 13.25 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 603 | 13.25 | wind | 9.0 | 43200 | < th | dose independent | rect. | 8 | 8 |
| 625 | 13.26 | wind | 9.0 | 43200 | < th | dose independent | rect. | 4 | 13 |
| 648 | 13.27 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 11 |
| 652 | 13.27 | temperature | 25.0 | 90 | > th | dose independent | rect. | 21 | 14 |
| 656 | 13.27 | temperature | 25.0 | 90 | > th | dose independent | rect. | 21 | 16 |
| 673 | 13.28 | wind | 9.0 | 43200 | < th | dose independent | rect. | 21 | 20 |
| 674 | 13.28 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 4 |
| 701 | 13.29 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 728 | 13.30 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 6 | 6 |
| 741 | 13.31 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 12 |
| 775 | 13.32 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 1 | 11 |
| 804 | 13.33 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 3 | 9 |
| 839 | 13.35 | wind | 9.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 852 | 13.35 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 899 | 13.37 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 933 | 13.39 | wind | 9.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 967 | 13.40 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 979 | 13.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 1000 | 13.41 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 8 |