BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0552600 Os10g0552600|AK062911
(133 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0552600 Similar to Tfm5 protein 134 2e-32
Os10g0552800 Similar to Tfm5 protein 127 2e-30
Os10g0552700 Similar to Tumor-related protein (Fragment) 120 3e-28
Os02g0662000 RCc3 protein 98 2e-21
Os04g0554600 Similar to RCc3 protein 97 3e-21
Os04g0554500 Similar to RCc3 protein 97 4e-21
Os03g0103100 Similar to Physical impedance induced protein 87 3e-18
Os10g0551900 Plant lipid transfer/seed storage/trypsin-alph... 87 3e-18
Os10g0554800 Similar to ExtA 86 9e-18
Os02g0662100 Similar to Tfm5 protein 84 2e-17
Os03g0103200 Similar to Physical impedance induced protein 83 5e-17
Os10g0552100 Similar to NT16 polypeptide 83 5e-17
Os10g0349800 83 5e-17
Os10g0552200 Plant lipid transfer/seed storage/trypsin-alph... 82 8e-17
Os10g0552300 Similar to Root-specific protein (RCc2 protein) 82 1e-16
Os10g0349300 Similar to Root-specific protein (RCc2 protein) 80 3e-16
Os03g0103300 Plant lipid transfer/seed storage/trypsin-alph... 80 3e-16
Os10g0349400 79 8e-16
Os10g0551800 Root-specific protein (RCc2 protein) 78 2e-15
Os04g0554800 Similar to RCc3 protein 77 3e-15
Os10g0349900 Similar to NT16 polypeptide 70 4e-13
Os03g0801200 Plant lipid transfer/seed storage/trypsin-alph... 69 1e-12
Os06g0104800 66 9e-12
Os04g0612300 Similar to Cell wall-plasma membrane linker pr... 65 1e-11
>Os10g0552600 Similar to Tfm5 protein
Length = 133
Score = 134 bits (337), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/85 (83%), Positives = 71/85 (83%)
Query: 49 SCPRDALKLHVCANVLGLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
SCPRDALKLHVCANVLGLVKAKIGAVAPYEPCCS CTAIKANVLGLN
Sbjct: 49 SCPRDALKLHVCANVLGLVKAKIGAVAPYEPCCSLLDGLVDLDAAVCLCTAIKANVLGLN 108
Query: 109 LNIPIDLSLILNNCGKICPSDYQCA 133
LNIPIDLSLILNNCGKICPSDYQCA
Sbjct: 109 LNIPIDLSLILNNCGKICPSDYQCA 133
>Os10g0552800 Similar to Tfm5 protein
Length = 132
Score = 127 bits (320), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 69/84 (82%)
Query: 49 SCPRDALKLHVCANVLGLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
SCPRDALKLHVCANVLGLVKAK+GAV+PYEPCCS CTAIKANVLG+
Sbjct: 47 SCPRDALKLHVCANVLGLVKAKVGAVSPYEPCCSLLDGLVDLDAAVCLCTAIKANVLGIK 106
Query: 109 LNIPIDLSLILNNCGKICPSDYQC 132
LN+PIDLSLILNNCGKICPSDYQC
Sbjct: 107 LNLPIDLSLILNNCGKICPSDYQC 130
>Os10g0552700 Similar to Tumor-related protein (Fragment)
Length = 124
Score = 120 bits (301), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 68/84 (80%)
Query: 49 SCPRDALKLHVCANVLGLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
SCPRDALKL VCANVLGLVKAK+GAVAPYEPCCS CTA+KANVLG+
Sbjct: 39 SCPRDALKLRVCANVLGLVKAKVGAVAPYEPCCSLLDGLVDLDAAVCLCTAVKANVLGIK 98
Query: 109 LNIPIDLSLILNNCGKICPSDYQC 132
L++P+DLSLILNNCGKICPSD++C
Sbjct: 99 LDLPVDLSLILNNCGKICPSDFKC 122
>Os02g0662000 RCc3 protein
Length = 133
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 49 SCPRDALKLHVCANVLGLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
CPRDALKL VCANVLGL+KAK+G V P EPCC CTAI+ N+LG+N
Sbjct: 51 RCPRDALKLGVCANVLGLIKAKVG-VPPAEPCCPLLEGLVDLEAAVCLCTAIRGNILGIN 109
Query: 109 LNIPIDLSLILNNCGKICPSDYQC 132
LN+PIDLSLILN CGK P+ ++C
Sbjct: 110 LNLPIDLSLILNYCGKTVPTGFKC 133
>Os04g0554600 Similar to RCc3 protein
Length = 131
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 49 SCPRDALKLHVCANVLGLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
CPRDALKL VCANVLGL+KAK+G V P EPCC CTAIK N+LG+N
Sbjct: 48 KCPRDALKLGVCANVLGLIKAKVG-VPPAEPCCPLLEGLVDLEAAVCLCTAIKGNILGIN 106
Query: 109 LNIPIDLSLILNNCGKICPSDYQC 132
LN+P+DLSLILN CGK P+ ++C
Sbjct: 107 LNLPVDLSLILNYCGKRVPTGFKC 130
>Os04g0554500 Similar to RCc3 protein
Length = 130
Score = 96.7 bits (239), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 49 SCPRDALKLHVCANVLGLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
CPRDALKL VCANVLGL+KAK+G V P EPCC CTAI+ N+LG+N
Sbjct: 48 KCPRDALKLGVCANVLGLIKAKVG-VPPAEPCCPLLEGLVDLEAAVCLCTAIRGNILGIN 106
Query: 109 LNIPIDLSLILNNCGKICPSDYQC 132
LN+P+DLSLILN CGK P+ ++C
Sbjct: 107 LNLPVDLSLILNYCGKRVPTGFKC 130
>Os03g0103100 Similar to Physical impedance induced protein
Length = 138
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 49 SCPRDALKLHVCANVLGLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
CP DALKL VCANVL L+K KIG V E CC CTAIKAN+LG+N
Sbjct: 54 KCPIDALKLSVCANVLNLLKLKIG-VPESEQCCPLLGGLVDLDAAVCLCTAIKANILGIN 112
Query: 109 LNIPIDLSLILNNCGKICPSDYQC 132
LNIP+DLSL+LN C K CPSD+ C
Sbjct: 113 LNIPVDLSLLLNYCHKTCPSDFTC 136
>Os10g0551900 Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor
domain containing protein
Length = 142
Score = 87.0 bits (214), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
Query: 50 CPRDALKLHVCANVL-GLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGL- 107
CP DALKL VCANVL GLV KIGA P + CC CTAIKANVLG+
Sbjct: 60 CPIDALKLRVCANVLNGLVGVKIGA-GP-DDCCPLLSGLADLDAAVCLCTAIKANVLGII 117
Query: 108 NLNIPIDLSLILNNCGKICPSDYQC 132
NLNIP+DLSLILNNCGKICPSD+ C
Sbjct: 118 NLNIPVDLSLILNNCGKICPSDFTC 142
>Os10g0554800 Similar to ExtA
Length = 167
Score = 85.5 bits (210), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 49 SCPRDALKLHVCANVLGLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
CP DALKL VCANVL L+KAK G V EPCC CTAIKANVLG+N
Sbjct: 84 KCPTDALKLGVCANVLDLIKAKAG-VPATEPCCPLLNGLVDLEAAVCLCTAIKANVLGIN 142
Query: 109 LNIPIDLSLILNNCGKICPSDYQCA 133
LN+PI LSLILN CGK P+ + C+
Sbjct: 143 LNLPIHLSLILNFCGKGVPTGFMCS 167
>Os02g0662100 Similar to Tfm5 protein
Length = 128
Score = 84.3 bits (207), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 50 CPRDALKLHVCANVLGLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLNL 109
CP++ALK CA+VLGLV A++G PYEPCC CTAIKANVLG+ L
Sbjct: 46 CPKNALKFAACADVLGLVSAEVGQ-PPYEPCCGVLGGLADLEAAVCLCTAIKANVLGITL 104
Query: 110 NIPIDLSLILNNCGKICPSDYQCA 133
+IP+ LSL++N CGK PS + CA
Sbjct: 105 DIPVKLSLLVNYCGKNVPSGFICA 128
>Os03g0103200 Similar to Physical impedance induced protein
Length = 141
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 49 SCPRDALKLHVCANVLGLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
CP DALKL VCANVL L+K K+G V E CC CTAIKANVLG+N
Sbjct: 56 KCPIDALKLGVCANVLNLLKLKVG-VPASEECCPLLGGLVDLDAAVCLCTAIKANVLGIN 114
Query: 109 LNIPIDLSLILNNCGKICPSDYQC 132
+N+P+DL L+LN C K CPSD+ C
Sbjct: 115 INVPVDLVLLLNYCHKTCPSDFSC 138
>Os10g0552100 Similar to NT16 polypeptide
Length = 131
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 50 CPRDALKLHVCANVL-GLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
CP DALKL VCANVL GLV KIGA P E CCS CTA+KANVLG+N
Sbjct: 50 CPIDALKLRVCANVLNGLVGVKIGA-GPNE-CCSLLQGIADLDAAVCLCTAVKANVLGIN 107
Query: 109 LNIPIDLSLILNNCGKICPSDYQC 132
LN+P+DLSLILN C KI PS + C
Sbjct: 108 LNLPVDLSLILNKCNKIYPSGFTC 131
>Os10g0349800
Length = 130
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 50 CPRDALKLHVCANVL-GLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
CP DALKL VCANVL GLV +IG P + CCS CTA+KANVLG+
Sbjct: 49 CPMDALKLRVCANVLKGLVDVEIGH-GPDD-CCSLLSGIADIDAAVCLCTAVKANVLGIR 106
Query: 109 LNIPIDLSLILNNCGKICPSDYQC 132
+N+P+DLSLILN CGK CPSD+ C
Sbjct: 107 VNLPVDLSLILNKCGKTCPSDFTC 130
>Os10g0552200 Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor
domain containing protein
Length = 131
Score = 82.4 bits (202), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 50 CPRDALKLHVCANVL-GLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
CP DALKL VCANVL GLV KIGA P E CCS CTA+KANVLG+N
Sbjct: 50 CPIDALKLRVCANVLNGLVGVKIGA-GPNE-CCSLLQGIADLDAAVCLCTAVKANVLGIN 107
Query: 109 LNIPIDLSLILNNCGKICPSDYQC 132
LN+P+DLSLILN C KI PS + C
Sbjct: 108 LNLPVDLSLILNKCSKIYPSGFTC 131
>Os10g0552300 Similar to Root-specific protein (RCc2 protein)
Length = 136
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 49 SCPRDALKLHVCANVL-GLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGL 107
CP DALKL VC NVL GLV KIGA P + CC CTA+KANVLG+
Sbjct: 54 RCPIDALKLRVCTNVLNGLVGVKIGA-GP-DDCCPLLSGLADLDAAVCLCTAVKANVLGM 111
Query: 108 NLNIPIDLSLILNNCGKICPSDYQC 132
LN+ +DLSLILN CGKICPSD+ C
Sbjct: 112 KLNLAVDLSLILNKCGKICPSDFTC 136
>Os10g0349300 Similar to Root-specific protein (RCc2 protein)
Length = 137
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 50 CPRDALKLHVCANVL-GLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
CP + LKL VCANVL GLV AKIG + CCS CTA+KANVLG+
Sbjct: 56 CPINTLKLRVCANVLNGLVDAKIGH--GTDDCCSLLSGIADLDAAVCLCTAVKANVLGIR 113
Query: 109 LNIPIDLSLILNNCGKICPSDYQC 132
+N+P+DLS++LN CGK CPSD+ C
Sbjct: 114 VNLPVDLSIMLNKCGKTCPSDFTC 137
>Os03g0103300 Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor
domain containing protein
Length = 184
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Query: 50 CPRDALKLHVCANVL-GLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
CP D LKL VCANVL GL+ ++G P +PCCS CTA++AN+LG+N
Sbjct: 100 CPIDTLKLGVCANVLNGLINVQLG-TPPRQPCCSLIQGLADLEAAVCLCTALRANILGIN 158
Query: 109 LNIPIDLSLILNNCGKICPSDYQCA 133
LN+PI+LSL++N CG+ PS +QC+
Sbjct: 159 LNLPINLSLLVNYCGRSVPSGFQCS 183
>Os10g0349400
Length = 137
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 50 CPRDALKLHVCANVLG-LVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
CP +ALKL VCANVL LV KIG P + CCS CTA+KANVLG+
Sbjct: 56 CPINALKLRVCANVLNRLVDVKIGH-GP-DDCCSLLSGIADLDAAVCLCTAVKANVLGIR 113
Query: 109 LNIPIDLSLILNNCGKICPSDYQC 132
+N+P+DLSLILN CGK CPSD+ C
Sbjct: 114 VNLPVDLSLILNKCGKSCPSDFTC 137
>Os10g0551800 Root-specific protein (RCc2 protein)
Length = 146
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 50 CPRDALKLHVCANVL-GLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
CP DALKL VCANVL G + +G PY+ CC CTA+KANVLG+N
Sbjct: 65 CPIDALKLRVCANVLNGALGVNVGH-GPYD-CCPLLAGLADADAAVCLCTAVKANVLGVN 122
Query: 109 LNIPIDLSLILNNCGKICPSDYQC 132
LN+P++L LILN CGK CPSD+ C
Sbjct: 123 LNVPVELKLILNKCGKTCPSDFTC 146
>Os04g0554800 Similar to RCc3 protein
Length = 137
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 50 CPRDALKLHVCANVLGLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLNL 109
CP + LK CA+VLG + ++G V P +PCCS CTAIKANVLG+ +
Sbjct: 55 CPVNTLKFGACADVLGAISGEVGQV-PAQPCCSLISGLADLEAAVCLCTAIKANVLGVVV 113
Query: 110 NIPIDLSLILNNCGKICPSDYQCA 133
NIP+ LSL++N CGK PS Y CA
Sbjct: 114 NIPVKLSLLVNYCGKCVPSGYTCA 137
>Os10g0349900 Similar to NT16 polypeptide
Length = 126
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 50 CPRDALKLHVCANVL-GLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGL- 107
CP DALKL VCAN+L GL+ KIG + CC CTA+KANVLGL
Sbjct: 44 CPIDALKLRVCANLLNGLIGVKIGRGP--DDCCPLLAGIADLDAAVCLCTALKANVLGLI 101
Query: 108 NLNIPIDLSLILNNCGKICPSDYQC 132
NLN+P+DLS+ILN CGK PS + C
Sbjct: 102 NLNLPVDLSIILNKCGKNYPSGFTC 126
>Os03g0801200 Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor
domain containing protein
Length = 129
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/34 (94%), Positives = 33/34 (97%)
Query: 49 SCPRDALKLHVCANVLGLVKAKIGAVAPYEPCCS 82
SCPRDALKL VCANVLGLVKAK+GAVAPYEPCCS
Sbjct: 26 SCPRDALKLRVCANVLGLVKAKVGAVAPYEPCCS 59
>Os06g0104800
Length = 122
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 50 CPRDALKLHVCANVL-GLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
CP + +KL VCA+VL GL+ A + P EPCC C AI AN+LGLN
Sbjct: 41 CPINTVKLGVCADVLDGLIHA---STPPKEPCCPLIAGLADLDAAVCVCLAINANLLGLN 97
Query: 109 LNIPIDLSLILNNCGKICPSDYQCA 133
L++P+DLSL+LN CG P+ ++CA
Sbjct: 98 LDVPVDLSLLLNYCGCKLPAGFKCA 122
>Os04g0612300 Similar to Cell wall-plasma membrane linker protein homolog
Length = 202
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 50 CPRDALKLHVCANVL-GLVKAKIGAVAPYEPCCSXXXXXXXXXXXXXXCTAIKANVLGLN 108
CP D LKL C + L GLV A +GA A + CC CTAIKA LGL+
Sbjct: 112 CPVDTLKLLACVDALNGLVHAVVGATA-GDTCCPLLSGVADLDAALCLCTAIKAKALGLS 170
Query: 109 LNIPIDLSLILNNCGKICPSDYQC 132
L +P+ +S+++N+CGK PSD+QC
Sbjct: 171 LVLPVAISVLVNDCGKYVPSDFQC 194
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.140 0.476
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,315,454
Number of extensions: 52592
Number of successful extensions: 198
Number of sequences better than 1.0e-10: 24
Number of HSP's gapped: 184
Number of HSP's successfully gapped: 24
Length of query: 133
Length of database: 17,035,801
Length adjustment: 90
Effective length of query: 43
Effective length of database: 12,336,541
Effective search space: 530471263
Effective search space used: 530471263
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 150 (62.4 bits)