Os03g0103200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Physical impedance induced protein.
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Os03g0103200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Physical impedance induced protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 480.99 | 1.03 | 11 | -3.21 | 1.2 | 2.2 | 1.66 | 8.38 | 0.779 | 6.22 | 23.6 | 7240 | -- | -- |
| 556.13 | 1.1 | 10.8 | -0.54 | 0.93 | 2.03 | 0.429 | -- | 1.22 | 6.65 | 28.53 | 6393 | -- | -- |
| 487.35 | 1.03 | 11 | -3.17 | 1.2 | 2.19 | -- | 8.32 | 0.781 | 6.41 | 23.63 | 7304 | -- | -- |
| 551.68 | 1.09 | 10.7 | -0.762 | 1.09 | 2.11 | -- | -- | 1.27 | 6.12 | 28.5 | 6786 | -- | -- |
| 559.62 | 1.1 | 11 | -3.04 | -- | 2.17 | -- | 7.99 | 0.83 | -- | 23.68 | 7582 | -- | -- |
| 754.72 | 1.29 | 10.8 | -1.55 | 1.1 | -- | 1.27 | -- | 0.711 | 6.77 | -- | -- | -- | -- |
| 758.74 | 1.29 | 10.8 | -1.53 | 1.11 | -- | -- | -- | 0.709 | 6.9 | -- | -- | -- | -- |
| 600.67 | 1.14 | 10.7 | -0.644 | -- | 2.34 | -- | -- | 1.5 | -- | 28.6 | 7788 | -- | -- |
| 566.13 | 1.11 | 10.7 | -- | 1.06 | 2.27 | -- | -- | 1.37 | 6.13 | 28.5 | 6757 | -- | -- |
| 823.12 | 1.34 | 10.9 | -1.5 | -- | -- | -- | -- | 0.73 | -- | -- | -- | -- | -- |
| 820.19 | 1.34 | 10.8 | -- | 1.09 | -- | -- | -- | 0.879 | 6.98 | -- | -- | -- | -- |
| 612.76 | 1.15 | 10.7 | -- | -- | 2.49 | -- | -- | 1.63 | -- | 28.5 | 7779 | -- | -- |
| 882.74 | 1.39 | 10.8 | -- | -- | -- | -- | -- | 0.896 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 489.88 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 3 | 492.00 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 14 | 497.77 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 74 | 505.87 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 85 | 506.73 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 89 | 506.98 | wind | 5.0 | 4320 | > th | dose independent | rect. | 19 | 10 |
| 112 | 509.21 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 19 | 16 |
| 126 | 510.41 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 19 | 9 |
| 136 | 511.10 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 18 |
| 147 | 511.73 | wind | 5.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 157 | 512.66 | wind | 5.0 | 4320 | > th | dose independent | rect. | 19 | 16 |
| 158 | 512.67 | wind | 5.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 168 | 513.73 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 169 | 513.82 | wind | 5.0 | 4320 | < th | dose independent | rect. | 19 | 10 |
| 204 | 515.30 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 12 |
| 211 | 515.75 | wind | 5.0 | 4320 | > th | dose independent | rect. | 17 | 18 |
| 219 | 516.19 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 251 | 517.66 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 18 | 4 |
| 277 | 518.87 | wind | 5.0 | 4320 | > th | dose independent | rect. | 17 | 13 |
| 281 | 519.19 | wind | 5.0 | 4320 | < th | dose independent | rect. | 19 | 15 |
| 302 | 519.42 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 308 | 519.59 | wind | 5.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 325 | 520.20 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 335 | 520.47 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 19 |
| 375 | 521.89 | wind | 5.0 | 14400 | > th | dose independent | rect. | 23 | 15 |
| 378 | 521.97 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 18 | 4 |
| 394 | 522.26 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 14 | NA |
| 427 | 523.29 | wind | 7.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 453 | 523.80 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 17 | 6 |
| 463 | 524.06 | wind | 5.0 | 14400 | < th | dose independent | rect. | 23 | 15 |
| 484 | 524.72 | wind | 5.0 | 4320 | < th | dose independent | rect. | 17 | 18 |
| 541 | 526.14 | wind | 5.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 551 | 526.31 | wind | 5.0 | 4320 | < th | dose independent | rect. | 17 | 13 |
| 598 | 527.58 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 614 | 527.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 648 | 528.41 | temperature | 10.0 | 4320 | > th | dose dependent | sin | 15 | NA |
| 664 | 528.74 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 665 | 528.74 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 742 | 530.54 | wind | 7.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 814 | 531.78 | temperature | 30.0 | 4320 | < th | dose dependent | sin | 15 | NA |
| 866 | 532.58 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 16 | 17 |
| 867 | 532.63 | wind | 5.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 868 | 532.66 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 917 | 533.47 | wind | 5.0 | 14400 | < th | dose independent | rect. | 20 | 18 |
| 939 | 533.74 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 19 | 20 |
| 946 | 533.88 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 17 | 16 |
| 956 | 534.03 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 986 | 534.53 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 996 | 534.64 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 999 | 534.72 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |