Os10g0552600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Tfm5 protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0552600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Tfm5 protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 337.01 | 0.863 | 3.36 | -0.855 | 0.669 | 1.76 | -2.69 | -3.32 | -0.0811 | 6.81 | 0.5398 | 1412 | -- | -- |
| 339.63 | 0.858 | 3.41 | -1.11 | 0.697 | 2.24 | -2.64 | -- | -0.178 | 6.93 | 0.03999 | 1414 | -- | -- |
| 352.94 | 0.875 | 3.34 | -0.911 | 0.63 | 1.65 | -- | -3.88 | -0.0628 | 6.75 | 0.5386 | 1381 | -- | -- |
| 358.84 | 0.882 | 3.41 | -1.11 | 0.657 | 2.36 | -- | -- | -0.16 | 7.12 | 0.05485 | 1420 | -- | -- |
| 345.88 | 0.866 | 3.37 | -0.935 | -- | 1.74 | -- | -6.16 | -0.132 | -- | 0.43 | 2336 | -- | -- |
| 403.62 | 0.942 | 3.48 | -1.75 | 0.713 | -- | -2.69 | -- | -0.445 | 7.04 | -- | -- | -- | -- |
| 421.81 | 0.962 | 3.47 | -1.8 | 0.709 | -- | -- | -- | -0.436 | 7.65 | -- | -- | -- | -- |
| 373.55 | 0.9 | 3.43 | -1.17 | -- | 2.47 | -- | -- | -0.183 | -- | 0.05917 | 1316 | -- | -- |
| 385.58 | 0.915 | 3.37 | -- | 0.678 | 2.96 | -- | -- | 0.014 | 7.54 | 9.87e-06 | 1433 | -- | -- |
| 448.85 | 0.99 | 3.49 | -1.79 | -- | -- | -- | -- | -0.426 | -- | -- | -- | -- | -- |
| 507.01 | 1.05 | 3.43 | -- | 0.695 | -- | -- | -- | -0.236 | 7.82 | -- | -- | -- | -- |
| 401.83 | 0.934 | 3.39 | -- | -- | 3.02 | -- | -- | -0.00473 | -- | 0.05 | 1367 | -- | -- |
| 533.2 | 1.08 | 3.44 | -- | -- | -- | -- | -- | -0.227 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 332.57 | wind | 3 | 14400 | > th | dose dependent | rect. | 11 | 3 |
| 2 | 333.34 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 21 |
| 5 | 333.74 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 6 | 333.85 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 16 | 334.81 | wind | 3 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 20 | 335.05 | wind | 5 | 14400 | > th | dose dependent | rect. | 10 | 9 |
| 24 | 335.26 | wind | 9 | 14400 | < th | dose dependent | rect. | 11 | 3 |
| 40 | 335.69 | wind | 3 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 68 | 336.37 | radiation | 1 | 1440 | < th | dose dependent | sin | 12 | NA |
| 72 | 336.47 | wind | 5 | 14400 | > th | dose independent | rect. | 10 | 10 |
| 78 | 336.59 | wind | 7 | 14400 | < th | dose independent | rect. | 10 | 8 |
| 82 | 336.63 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 19 |
| 92 | 336.82 | radiation | 1 | 1440 | < th | dose dependent | rect. | 14 | 17 |
| 134 | 337.44 | wind | 7 | 14400 | > th | dose independent | rect. | 5 | 13 |
| 156 | 337.54 | wind | 7 | 14400 | < th | dose independent | rect. | 5 | 13 |
| 196 | 337.87 | wind | 7 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 199 | 337.88 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 13 |
| 253 | 338.32 | wind | 5 | 14400 | > th | dose dependent | sin | 22 | NA |
| 303 | 338.65 | wind | 7 | 14400 | > th | dose independent | sin | 23 | NA |
| 321 | 338.79 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 345 | 338.91 | wind | 7 | 14400 | < th | dose independent | sin | 23 | NA |
| 376 | 339.14 | radiation | 1 | 1440 | < th | dose dependent | rect. | 4 | 22 |
| 381 | 339.17 | radiation | 1 | 1440 | < th | dose dependent | rect. | 4 | 16 |
| 382 | 339.17 | radiation | 1 | 1440 | < th | dose dependent | rect. | 4 | 18 |
| 383 | 339.17 | radiation | 1 | 1440 | < th | dose dependent | rect. | 4 | 20 |
| 398 | 339.20 | radiation | 1 | 1440 | < th | dose dependent | rect. | 21 | 23 |
| 404 | 339.22 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 406 | 339.22 | radiation | 1 | 1440 | < th | dose dependent | rect. | 1 | 19 |
| 407 | 339.22 | radiation | 1 | 1440 | < th | dose dependent | rect. | 1 | 21 |
| 408 | 339.22 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 21 |
| 467 | 339.48 | radiation | 1 | 1440 | < th | dose dependent | rect. | 4 | 11 |
| 481 | 339.57 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 482 | 339.57 | radiation | 1 | 1440 | < th | dose dependent | rect. | 1 | 14 |
| 483 | 339.57 | radiation | 1 | 1440 | < th | dose dependent | rect. | 21 | 18 |
| 502 | 339.63 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 19 |
| 513 | 339.68 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 19 |
| 554 | 340.07 | wind | 5 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 566 | 340.13 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 575 | 340.16 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 21 |
| 599 | 340.32 | wind | 7 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 649 | 340.57 | radiation | 1 | 1440 | < th | dose dependent | sin | 4 | NA |
| 749 | 340.98 | radiation | 1 | 1440 | < th | dose independent | rect. | 17 | 22 |
| 765 | 341.03 | radiation | 1 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 813 | 341.25 | wind | 5 | 14400 | < th | dose independent | rect. | 16 | 5 |