Os10g0349300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Root-specific protein (RCc2 protein).
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Os10g0349300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Root-specific protein (RCc2 protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.36 | 0.515 | 2.73 | -0.338 | 0.0914 | -6.07 | -0.468 | -28.3 | -0.0636 | 3.11 | 9.241 | 40 | -- | -- |
| 133.05 | 0.541 | 2.81 | -0.199 | 0.0639 | -0.188 | -0.0403 | -- | -0.0974 | 5.4 | 9.241 | 40 | -- | -- |
| 120.72 | 0.512 | 2.73 | -0.347 | 0.106 | -6.2 | -- | -29 | -0.068 | 4.71 | 9.296 | 42 | -- | -- |
| 128.53 | 0.531 | 2.81 | -0.114 | 0.0927 | 1.04 | -- | -- | -0.0689 | 4.44 | 7.834 | 40 | -- | -- |
| 119.41 | 0.509 | 2.69 | -0.53 | -- | -12.4 | -- | -56.3 | -0.0634 | -- | 9.542 | 40 | -- | -- |
| 133.09 | 0.541 | 2.81 | -0.197 | 0.0646 | -- | -0.0427 | -- | -0.0967 | 5.5 | -- | -- | -- | -- |
| 133.09 | 0.54 | 2.81 | -0.197 | 0.0644 | -- | -- | -- | -0.0965 | 5.54 | -- | -- | -- | -- |
| 128.98 | 0.531 | 2.81 | -0.114 | -- | 1 | -- | -- | -0.0675 | -- | 7.834 | 40 | -- | -- |
| 128.86 | 0.532 | 2.8 | -- | 0.0922 | 1.09 | -- | -- | -0.0552 | 4.42 | 7.834 | 40 | -- | -- |
| 133.31 | 0.539 | 2.81 | -0.195 | -- | -- | -- | -- | -0.095 | -- | -- | -- | -- | -- |
| 134.11 | 0.542 | 2.81 | -- | 0.0612 | -- | -- | -- | -0.0746 | 5.67 | -- | -- | -- | -- |
| 129.31 | 0.531 | 2.8 | -- | -- | 1.06 | -- | -- | -0.0539 | -- | 7.834 | 40 | -- | -- |
| 134.31 | 0.541 | 2.81 | -- | -- | -- | -- | -- | -0.0733 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 118.79 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 3 | 119.63 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 14 | 121.04 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 15 | 121.53 | wind | 9 | 30 | > th | dose independent | rect. | 11 | 5 |
| 51 | 121.93 | wind | 9 | 30 | > th | dose dependent | rect. | 11 | 5 |
| 92 | 122.04 | wind | 9 | 30 | < th | dose independent | sin | 20 | NA |
| 101 | 122.10 | wind | 9 | 30 | > th | dose independent | sin | 20 | NA |
| 156 | 122.36 | temperature | 20 | 10 | < th | dose dependent | rect. | 3 | 9 |
| 157 | 122.39 | wind | 9 | 30 | > th | dose dependent | sin | 21 | NA |
| 172 | 122.48 | temperature | 15 | 270 | > th | dose independent | rect. | 3 | 11 |
| 176 | 122.51 | wind | 9 | 30 | > th | dose dependent | rect. | 15 | 21 |
| 191 | 122.54 | wind | 9 | 30 | > th | dose independent | rect. | 15 | 21 |
| 205 | 122.57 | wind | 9 | 30 | < th | dose independent | no | NA | NA |
| 308 | 122.67 | wind | 9 | 30 | > th | dose dependent | no | NA | NA |
| 443 | 122.71 | wind | 9 | 30 | > th | dose independent | no | NA | NA |
| 546 | 122.90 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 1 | 1 |
| 579 | 123.17 | wind | 9 | 30 | < th | dose independent | rect. | 3 | 23 |
| 599 | 123.35 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 2 | 15 |
| 618 | 123.42 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 2 | 7 |
| 647 | 123.59 | temperature | 15 | 720 | > th | dose independent | rect. | 3 | 4 |
| 696 | 123.75 | humidity | 90 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 703 | 123.76 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 729 | 123.83 | humidity | 90 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 731 | 123.84 | temperature | 15 | 4320 | < th | dose dependent | rect. | 5 | 12 |
| 734 | 123.86 | temperature | 15 | 4320 | < th | dose dependent | rect. | 2 | 17 |
| 747 | 123.90 | temperature | 15 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 755 | 123.91 | temperature | 15 | 4320 | < th | dose dependent | rect. | 5 | 5 |
| 764 | 123.94 | temperature | 15 | 4320 | < th | dose dependent | rect. | 14 | 2 |
| 766 | 123.94 | temperature | 15 | 4320 | < th | dose dependent | rect. | 12 | 5 |
| 770 | 123.94 | temperature | 15 | 4320 | < th | dose dependent | rect. | 2 | 13 |
| 776 | 123.95 | temperature | 15 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 832 | 123.99 | temperature | 15 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 835 | 123.99 | temperature | 15 | 4320 | < th | dose dependent | sin | 1 | NA |
| 856 | 124.00 | temperature | 15 | 4320 | < th | dose dependent | rect. | 2 | 9 |
| 876 | 124.01 | temperature | 15 | 1440 | < th | dose independent | sin | 23 | NA |
| 882 | 124.02 | temperature | 15 | 1440 | > th | dose independent | rect. | 2 | 16 |
| 888 | 124.03 | temperature | 15 | 1440 | < th | dose dependent | sin | 23 | NA |
| 898 | 124.04 | temperature | 20 | 10 | < th | dose dependent | sin | 1 | NA |
| 939 | 124.07 | temperature | 15 | 1440 | < th | dose independent | rect. | 4 | 19 |
| 950 | 124.08 | temperature | 15 | 1440 | < th | dose independent | rect. | 4 | 17 |
| 975 | 124.10 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 1 | 3 |
| 985 | 124.11 | temperature | 20 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 987 | 124.11 | temperature | 15 | 4320 | < th | dose dependent | rect. | 2 | 5 |
| 1000 | 124.12 | temperature | 15 | 1440 | < th | dose independent | rect. | 4 | 11 |