BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0349300 Os10g0349300|AK108560
(137 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G12500.1 | chr4:7414369-7414902 REVERSE LENGTH=178 106 4e-24
AT4G12490.1 | chr4:7409830-7410378 REVERSE LENGTH=183 106 4e-24
AT4G12480.1 | chr4:7406371-7406877 REVERSE LENGTH=169 100 2e-22
AT4G12470.1 | chr4:7401371-7401856 REVERSE LENGTH=162 98 2e-21
AT1G12090.1 | chr1:4090176-4090589 REVERSE LENGTH=138 96 5e-21
AT4G12510.1 | chr4:7417414-7417803 REVERSE LENGTH=130 96 5e-21
AT4G12520.1 | chr4:7421279-7421668 REVERSE LENGTH=130 96 5e-21
AT1G62510.1 | chr1:23136632-23137081 REVERSE LENGTH=150 95 9e-21
AT2G45180.1 | chr2:18626377-18626781 FORWARD LENGTH=135 92 7e-20
AT5G46890.1 | chr5:19036437-19036820 REVERSE LENGTH=128 87 2e-18
AT4G12550.1 | chr4:7439176-7439511 FORWARD LENGTH=112 87 3e-18
AT5G46900.1 | chr5:19039954-19040337 REVERSE LENGTH=128 87 3e-18
AT1G12100.1 | chr1:4095246-4095845 FORWARD LENGTH=133 86 5e-18
AT3G22120.1 | chr3:7795283-7796287 REVERSE LENGTH=335 84 3e-17
AT4G12545.1 | chr4:7434260-7434586 FORWARD LENGTH=109 82 6e-17
AT4G00165.1 | chr4:69433-69819 REVERSE LENGTH=129 82 8e-17
AT4G12530.1 | chr4:7428141-7428494 REVERSE LENGTH=118 78 1e-15
AT4G22460.1 | chr4:11839160-11839561 REVERSE LENGTH=134 78 2e-15
AT3G22142.1 | chr3:7803604-7808046 REVERSE LENGTH=1481 74 2e-14
AT2G10940.1 | chr2:4311160-4312035 REVERSE LENGTH=292 72 1e-13
AT1G62500.1 | chr1:23132181-23133074 FORWARD LENGTH=298 69 9e-13
AT4G15160.1 | chr4:8646192-8647019 FORWARD LENGTH=276 65 1e-11
AT4G22505.1 | chr4:11851363-11852955 REVERSE LENGTH=531 55 1e-08
AT4G22485.1 | chr4:11844506-11846476 REVERSE LENGTH=657 54 4e-08
AT4G22470.1 | chr4:11840316-11841443 REVERSE LENGTH=376 49 6e-07
>AT4G12500.1 | chr4:7414369-7414902 REVERSE LENGTH=178
Length = 177
Score = 106 bits (264), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Query: 51 GEHGRCPINTLKLRVCANVLNGLVDAKIGH-GTDDCCSLLSGIADLDAAVCLCTAVKANV 109
G G CPI+ L+L VCANVL+GL++ ++G CCSL+ G+ DLDAA+CLCTA++ANV
Sbjct: 89 GSSGNCPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANV 148
Query: 110 LGIRVNLPVDLSIMLNKCGKTCPSDFTC 137
LGI +N+P+ LS++LN C + PSDF C
Sbjct: 149 LGINLNVPISLSVLLNVCNRRLPSDFQC 176
>AT4G12490.1 | chr4:7409830-7410378 REVERSE LENGTH=183
Length = 182
Score = 106 bits (264), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
Query: 51 GEHGRCPINTLKLRVCANVLNGLVDAKIGHGTDD-CCSLLSGIADLDAAVCLCTAVKANV 109
G G CPI+ L+L VCANVL+GL++ ++G + CCSL+ G+ DLDAAVCLCTA++ANV
Sbjct: 94 GSSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRANV 153
Query: 110 LGIRVNLPVDLSIMLNKCGKTCPSDFTC 137
LGI +N+P+ LS++LN C + PS+F C
Sbjct: 154 LGINLNVPISLSVLLNVCNRRLPSNFQC 181
>AT4G12480.1 | chr4:7406371-7406877 REVERSE LENGTH=169
Length = 168
Score = 100 bits (250), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Query: 51 GEHGRCPINTLKLRVCANVLNGLVDAKIGH-GTDDCCSLLSGIADLDAAVCLCTAVKANV 109
G G CPI+ L+L VCANVL+ L++ ++G CCSL+ G+ DLDAA+CLCTA++ANV
Sbjct: 80 GSSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANV 139
Query: 110 LGIRVNLPVDLSIMLNKCGKTCPSDFTC 137
LGI +N+P+ LS++LN C + PS F C
Sbjct: 140 LGINLNVPISLSVLLNVCNRKVPSGFQC 167
>AT4G12470.1 | chr4:7401371-7401856 REVERSE LENGTH=162
Length = 161
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 66/89 (74%), Gaps = 2/89 (2%)
Query: 51 GEHGR-CPINTLKLRVCANVLNGLVDAKIGH-GTDDCCSLLSGIADLDAAVCLCTAVKAN 108
G G CPI+ LKL VCANVL+ L++ ++G + CCSL+ G+ D+DAA+CLCTA++AN
Sbjct: 72 GSSGNSCPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDAAICLCTALRAN 131
Query: 109 VLGIRVNLPVDLSIMLNKCGKTCPSDFTC 137
VLGI +N+P+ LS++LN C + PS F C
Sbjct: 132 VLGINLNVPISLSVLLNVCNRKLPSGFQC 160
>AT1G12090.1 | chr1:4090176-4090589 REVERSE LENGTH=138
Length = 137
Score = 96.3 bits (238), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Query: 59 NTLKLRVCANVLNGLVDAKIGHG-TDDCCSLLSGIADLDAAVCLCTAVKANVLGIRVNLP 117
+TLKL VCANVLNGL+D +G + CCSL+ G+AD++AAVCLCTA+KAN+LGI +NLP
Sbjct: 58 DTLKLGVCANVLNGLLDLTLGKPPVEPCCSLIQGLADVEAAVCLCTALKANILGINLNLP 117
Query: 118 VDLSIMLNKCGKTCPSDFTC 137
+ LS++LN C K P F C
Sbjct: 118 ISLSLLLNVCSKQLPPGFQC 137
>AT4G12510.1 | chr4:7417414-7417803 REVERSE LENGTH=130
Length = 129
Score = 96.3 bits (238), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 52 EHGRCPINTLKLRVCANVLNGLVDAKIGHG-TDDCCSLLSGIADLDAAVCLCTAVKANVL 110
G CP +TLKL VCANVL L+ ++G CCSLL+G+ DL+AA CLCTA+KA VL
Sbjct: 42 STGSCPKDTLKLGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVL 101
Query: 111 GIRVNLPVDLSIMLNKCGKTCPSDFTC 137
GI +N+PV LS++LN CGK PS F C
Sbjct: 102 GINLNVPVSLSLLLNVCGKKVPSGFVC 128
>AT4G12520.1 | chr4:7421279-7421668 REVERSE LENGTH=130
Length = 129
Score = 96.3 bits (238), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 52 EHGRCPINTLKLRVCANVLNGLVDAKIGHG-TDDCCSLLSGIADLDAAVCLCTAVKANVL 110
G CP +TLKL VCANVL L+ ++G CCSLL+G+ DL+AA CLCTA+KA VL
Sbjct: 42 STGSCPKDTLKLGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVL 101
Query: 111 GIRVNLPVDLSIMLNKCGKTCPSDFTC 137
GI +N+PV LS++LN CGK PS F C
Sbjct: 102 GINLNVPVSLSLLLNVCGKKVPSGFVC 128
>AT1G62510.1 | chr1:23136632-23137081 REVERSE LENGTH=150
Length = 149
Score = 95.1 bits (235), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 54 GRCPINTLKLRVCANVLNGLVDAKIGHG-TDDCCSLLSGIADLDAAVCLCTAVKANVLGI 112
+CP + LKL VCANVLNGL++ +G + CC+L+ G+ADL+AA CLCTA+KAN+LGI
Sbjct: 65 AKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKANILGI 124
Query: 113 RVNLPVDLSIMLNKCGKTCPSDFTC 137
+N+P+ LS++LN C K P F C
Sbjct: 125 NLNIPLSLSLLLNVCSKKVPRGFQC 149
>AT2G45180.1 | chr2:18626377-18626781 FORWARD LENGTH=135
Length = 134
Score = 92.4 bits (228), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
Query: 56 CPINTLKLRVCANVLNGLVDAKIGHGTDD-CCSLLSGIADLDAAVCLCTAVKANVLGIRV 114
CP +TLKL VCA++L GLV+ +G CC+LL G+A+L+AAVCLCTA+KANVLGI +
Sbjct: 52 CPTDTLKLGVCADLL-GLVNVVVGSPPKTPCCTLLQGLANLEAAVCLCTALKANVLGINL 110
Query: 115 NLPVDLSIMLNKCGKTCPSDFTC 137
N+P+DL+++LN CGK P F C
Sbjct: 111 NVPIDLTLLLNYCGKKVPHGFQC 133
>AT5G46890.1 | chr5:19036437-19036820 REVERSE LENGTH=128
Length = 127
Score = 87.0 bits (214), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 65/95 (68%), Gaps = 4/95 (4%)
Query: 45 SHHGGHGEHGRCPI--NTLKLRVCANVLNGLVDAKIGHGTDDCCSLLSGIADLDAAVCLC 102
S+H P + LKL+VCANVL+ +V + T +CC+L+ G+ DL+AAVCLC
Sbjct: 34 SYHKKPATPSLKPTCKDALKLKVCANVLD-VVKVSLP-PTSNCCALIKGLVDLEAAVCLC 91
Query: 103 TAVKANVLGIRVNLPVDLSIMLNKCGKTCPSDFTC 137
TA+KANVLGI +N+P+ L+++LN CGK PS F C
Sbjct: 92 TALKANVLGINLNVPISLNVVLNHCGKKVPSGFKC 126
>AT4G12550.1 | chr4:7439176-7439511 FORWARD LENGTH=112
Length = 111
Score = 87.0 bits (214), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 62/90 (68%), Gaps = 3/90 (3%)
Query: 50 HGEHGRCPINTLKLRVCANVLNGLVDAKIGHG-TDDCCSLLSGIADLDAAVCLCTAVKAN 108
G CP N++++ C VLN LVD +G+ CCSL+ G+ADL+AAVCLCTAVKA+
Sbjct: 22 SATTGTCPKNSIEIGTCVTVLN-LVDLTLGNPPVKPCCSLIQGLADLEAAVCLCTAVKAS 80
Query: 109 VLGI-RVNLPVDLSIMLNKCGKTCPSDFTC 137
+LGI +NLP++LS++LN C + P F C
Sbjct: 81 ILGIVNINLPINLSVLLNVCSRNAPKSFQC 110
>AT5G46900.1 | chr5:19039954-19040337 REVERSE LENGTH=128
Length = 127
Score = 87.0 bits (214), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Query: 59 NTLKLRVCANVLNGLVDAKIGHGTDDCCSLLSGIADLDAAVCLCTAVKANVLGIRVNLPV 118
+ LKL+VCANVL+ LV + T +CC+L+ G+ DL+AAVCLCTA+KANVLGI +N+P+
Sbjct: 50 DALKLKVCANVLD-LVKVSLPP-TSNCCALIKGLVDLEAAVCLCTALKANVLGINLNVPI 107
Query: 119 DLSIMLNKCGKTCPSDFTC 137
L+++LN CGK PS F C
Sbjct: 108 SLNVVLNHCGKKVPSGFKC 126
>AT1G12100.1 | chr1:4095246-4095845 FORWARD LENGTH=133
Length = 132
Score = 85.9 bits (211), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 55 RCPINTLKLRVCANVLNGLVDAKIGHGTDD-CCSLLSGIADLDAAVCLCTAVKANVLGIR 113
C + +KL VCA +L+ V IG+ +D CCS+L G+ DLDAAVCLCT +KAN+LGI
Sbjct: 48 SCSRDAIKLGVCAKILDVAVGTVIGNPSDTLCCSVLQGLVDLDAAVCLCTTIKANILGIN 107
Query: 114 VNLPVDLSIMLNKCGKTCPSDFTC 137
++LP+ LS+++N CGK PSD C
Sbjct: 108 IDLPISLSLLINTCGKKLPSDCIC 131
>AT3G22120.1 | chr3:7795283-7796287 REVERSE LENGTH=335
Length = 334
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Query: 56 CPINTLKLRVCANVLNGLVDAKIG--HGTDDCCSLLSGIADLDAAVCLCTAVKANVLGIR 113
CPI+TLKL C +VL GL+ +G H +CC +L G+ DLDAAVCLCT +K +L I
Sbjct: 250 CPIDTLKLGACVDVLGGLIHIGLGKSHAKAECCPVLGGLLDLDAAVCLCTTIKLKLLNID 309
Query: 114 VNLPVDLSIMLNKCGKTCPSDFTC 137
+ LP+ L ++L+ CGKT PSDF C
Sbjct: 310 LVLPIALELLLD-CGKTPPSDFKC 332
>AT4G12545.1 | chr4:7434260-7434586 FORWARD LENGTH=109
Length = 108
Score = 82.4 bits (202), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 61/90 (67%), Gaps = 6/90 (6%)
Query: 50 HGEHGRCPINTLKLRVCANVLNGLVDAKIGHG-TDDCCSLLSGIADLDAAVCLCTAVKAN 108
G CPI ++ CANVLN LVD +G+ CCSL+ G+ADL+AA CLCTA+KA+
Sbjct: 22 SATTGTCPI---QISTCANVLN-LVDLTLGNPPVKPCCSLIQGLADLEAAACLCTALKAS 77
Query: 109 VLGI-RVNLPVDLSIMLNKCGKTCPSDFTC 137
+LGI +NLP++LS++LN C + P F C
Sbjct: 78 ILGIVNINLPINLSVLLNVCSRNAPKGFQC 107
>AT4G00165.1 | chr4:69433-69819 REVERSE LENGTH=129
Length = 128
Score = 82.0 bits (201), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 59/85 (69%), Gaps = 3/85 (3%)
Query: 55 RCPINTLKLRVCANVLNGLVDAKIG-HGTDDCCSLLSGIADLDAAVCLCTAVKANVLGI- 112
+CP +TLK VC + L GLV IG + +CCSL+ G+AD +AAVCLCTA+K ++LG+
Sbjct: 45 KCPRDTLKFGVCGSWL-GLVSEVIGTPPSQECCSLIKGLADFEAAVCLCTALKTSILGVA 103
Query: 113 RVNLPVDLSIMLNKCGKTCPSDFTC 137
V +PV L+++LN CGK P F C
Sbjct: 104 PVKIPVALTLLLNSCGKNVPQGFVC 128
>AT4G12530.1 | chr4:7428141-7428494 REVERSE LENGTH=118
Length = 117
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 56 CPINTLKLRVCANVLNGLVDAKIGH-GTDDCCSLLSGIADLDAAVCLCTAVKANVLGIRV 114
CP + LKL C+NVLN L++ K+G CCS+L G+ DLD AVCLCTA+K ++LGI +
Sbjct: 34 CPRDVLKLSTCSNVLN-LINLKLGAPAMRPCCSILFGLIDLDVAVCLCTALKLSLLGITI 92
Query: 115 NLPVDLSIMLNKCGKTCPSDFTC 137
+ P+ L++ LN CG T P F C
Sbjct: 93 DTPIHLNLALNACGGTLPDGFRC 115
>AT4G22460.1 | chr4:11839160-11839561 REVERSE LENGTH=134
Length = 133
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 54 GRCPINTLKLRVCANVLNGLVDAKIG-HGTDDCCSLLSGIADLDAAVCLCTAVKANVLGI 112
G CP + LK+ VC N LN L G CCSL+ G+ DL+AA+CLCTA+KA+VLGI
Sbjct: 48 GTCPKDALKVGVCVNALNLLNGLTPGTPPVTPCCSLIEGLVDLEAAICLCTALKASVLGI 107
Query: 113 RVNLPVDLSIMLNKCGKTCPSDF 135
+ LP++LS++LN C + DF
Sbjct: 108 NLTLPINLSLLLNICNREASRDF 130
>AT3G22142.1 | chr3:7803604-7808046 REVERSE LENGTH=1481
Length = 1480
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 56 CPINTLKLRVCANVLNGLVDAKIGHGTDD-CCSLLSGIADLDAAVCLCTAVKANVLGIRV 114
CPI+TLKL C ++L GLV IG + CC ++ G+ DLDAAVCLCT +KA +L I V
Sbjct: 1397 CPIDTLKLGSCVDLLGGLVHIGIGKSAKEKCCPVVEGLVDLDAAVCLCTTIKAKLLNIDV 1456
Query: 115 NLPVDLSIMLNKCGKTCPSDFTC 137
LP+ L ++LN CGK P F C
Sbjct: 1457 ILPIALEVLLN-CGKNPPPGFKC 1478
>AT2G10940.1 | chr2:4311160-4312035 REVERSE LENGTH=292
Length = 291
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Query: 51 GEHGRCPINTLKLRVCANVLNGLVDAKIGHG---TDDCCSLLSGIADLDAAVCLCTAVKA 107
G CPI+TLKL C ++L GLV KIG G + CC LL G+ +++AA CLCT +K
Sbjct: 203 GGKATCPIDTLKLGACVDLLGGLV--KIGLGDPAVNKCCPLLKGLVEVEAAACLCTTLKL 260
Query: 108 NVLGIRVNLPVDLSIMLNKCGKTCPSDFTC 137
L + + +PV L ++L CGK P +TC
Sbjct: 261 KALDLNLYVPVALQLLLT-CGKNPPPGYTC 289
>AT1G62500.1 | chr1:23132181-23133074 FORWARD LENGTH=298
Length = 297
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 52 EHGRCPINTLKLRVCANVLNGLVDAKIGHGTDD-CCSLLSGIADLDAAVCLCTAVKANVL 110
+ CPIN LKL C +VL GL+ +G+ ++ CC +L G+ +L+AAVCLCT ++ +L
Sbjct: 208 KQPTCPINALKLGACVDVLGGLIHIGLGNPVENVCCPVLQGLLELEAAVCLCTTIRLKLL 267
Query: 111 GIRVNLPVDLSIMLNKCGKTCPSDFTC 137
+ + +P+ L ++ CG PS F C
Sbjct: 268 NLNIFIPLALQALIT-CGINPPSGFVC 293
>AT4G15160.1 | chr4:8646192-8647019 FORWARD LENGTH=276
Length = 275
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 56 CPINTLKLRVCANVLNGLVDAKIG--HGTDDCCSLLSGIADLDAAVCLCTAVKANVLGIR 113
CPI+ LKL C +VL GL+ +G + CC LL + LDAAVCLCT ++A +L I
Sbjct: 181 CPIDALKLGACVDVLGGLIHIGLGKSYAKAKCCPLLDDLVGLDAAVCLCTTIRAKLLNID 240
Query: 114 VNLPVDLSIMLNKCGKTCPSD-FTC 137
+ +P+ L ++++ CGKT P F C
Sbjct: 241 LIIPIALEVLVD-CGKTPPPRGFKC 264
>AT4G22505.1 | chr4:11851363-11852955 REVERSE LENGTH=531
Length = 530
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 59 NTLKLRVCANVLNGLVDAKIGHGT-DDCCSLLSGIADLDAAVCLCTAVKANVLGIRVNLP 117
N + L++C+ +LN + D +G GT CCSL+ G++D DA CLC +V+A +LP
Sbjct: 455 NGIPLQICSTILN-MFDGFLGLGTAQPCCSLIRGLSDADALACLCESVRAP----SRSLP 509
Query: 118 VDLSIMLNKCGKTCPSDFTC 137
++ + CG++ P FTC
Sbjct: 510 RNIINLFMTCGRSIPPGFTC 529
>AT4G22485.1 | chr4:11844506-11846476 REVERSE LENGTH=657
Length = 656
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 53 HGRCPINTLKLRVCANVLNGLVDAKIGHGTDDCCSLLSGIADLDAAVCLCTAVKANVLGI 112
G CP N ++R C+NVL + CC+L+ ++D +AA CLC V+A
Sbjct: 575 RGTCPRNANQIRTCSNVLRFFGNFLDFRLAQPCCTLIRNLSDAEAAACLCDLVRAR---- 630
Query: 113 RVNLPVDLSIMLNKCGKTCPSDFTC 137
R L ++ I+ CG+ P FTC
Sbjct: 631 RSTLSPNIIILCRACGRRIPRGFTC 655
>AT4G22470.1 | chr4:11840316-11841443 REVERSE LENGTH=376
Length = 375
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 54 GRCPINTLKLRVCANVLNGLVDAKIGHG-TDDCCSLLSGIADLDAAVCLCTAVKANVLGI 112
G C N +L++CA +L + D + G + CCS++ ++DLDA C C +V A
Sbjct: 295 GICSKNDTELKICAGIL-AISDGLLTTGRAEPCCSIVRNVSDLDAVTCFCKSVGAR---- 349
Query: 113 RVNLPVDLSIMLNKCGKTCPSDFTC 137
R +L + I CG+ P F+C
Sbjct: 350 RFSLSPNFGIFFKVCGRRIPQGFSC 374
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 54 GRCPINTLKLRVCANVLNGLVDAKIGHG-TDDCCSLLSGIADLDAAVCLCTAVKANVLGI 112
G C N +L++CA +L + D + G + CCS++ ++DLDA C C +V A
Sbjct: 174 GICSKNDTELKICAGIL-AISDGLLTTGRAEPCCSIIRNVSDLDAVTCFCKSVGAP---- 228
Query: 113 RVNLPVDLSIMLNKCGKTCPSDFTC 137
R +L + I CG+ P F+C
Sbjct: 229 RFSLSPNFGIFFKVCGRRIPQGFSC 253
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.139 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,561,771
Number of extensions: 89701
Number of successful extensions: 245
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 209
Number of HSP's successfully gapped: 28
Length of query: 137
Length of database: 11,106,569
Length adjustment: 88
Effective length of query: 49
Effective length of database: 8,693,961
Effective search space: 426004089
Effective search space used: 426004089
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 106 (45.4 bits)